RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 U3KQK5 164 aa12.19□□□□□ -0.46
IRF1-202ENST00000405885 NPYP01303 97 aa12.18□□□□□ -0.46
IRF1-202ENST00000405885 LINC00315P59091 139 aa12.18□□□□□ -0.46
IRF1-202ENST00000405885 URB1-AS1Q96HZ7 61 aa12.18□□□□□ -0.46
IRF1-202ENST00000405885 PRELID3AQ96N28 172 aa12.18□□□□□ -0.46
IRF1-202ENST00000405885 MRPL16Q9NX20 251 aaKnown RBP12.18□□□□□ -0.46
IRF1-202ENST00000405885 DPH3P1Q9H4G8 78 aa12.18□□□□□ -0.46
IRF1-202ENST00000405885 NIT2Q9NQR4 276 aa12.18□□□□□ -0.46
IRF1-202ENST00000405885 LOC389332A0A1B0GUA5 103 aa12.17□□□□□ -0.46
IRF1-202ENST00000405885 DEFB135Q30KP9 77 aa12.17□□□□□ -0.46
IRF1-202ENST00000405885 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
IRF1-202ENST00000405885 LINC00587B1AMM8 73 aa12.17□□□□□ -0.46
IRF1-202ENST00000405885 PRB2P02812 416 aaPredicted RBP12.17□□□□□ -0.46
IRF1-202ENST00000405885 SYT8Q8NBV8 401 aa12.17□□□□□ -0.46
IRF1-202ENST00000405885 IGHV3-73A0A0B4J1V6 119 aa12.16□□□□□ -0.46
IRF1-202ENST00000405885 M0R2P5 195 aa12.16□□□□□ -0.46
IRF1-202ENST00000405885 CRYGDP07320 174 aa12.16□□□□□ -0.46
IRF1-202ENST00000405885 FABP4P15090 132 aa12.16□□□□□ -0.46
IRF1-202ENST00000405885 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
IRF1-202ENST00000405885 NIT1Q86X76 327 aa12.15□□□□□ -0.46
IRF1-202ENST00000405885 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
IRF1-202ENST00000405885 HIST1H2BLQ99880 126 aa12.15□□□□□ -0.46
IRF1-202ENST00000405885 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
IRF1-202ENST00000405885 PMCHL1Q16048 86 aa12.15□□□□□ -0.46
IRF1-202ENST00000405885 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
IRF1-202ENST00000405885 RNASEKQ6P5S7 137 aaKnown RBP12.15□□□□□ -0.46
IRF1-202ENST00000405885 FAM19A2Q8N3H0 131 aa12.15□□□□□ -0.46
IRF1-202ENST00000405885 RPL39LQ96EH5 51 aaKnown RBP12.15□□□□□ -0.46
IRF1-202ENST00000405885 NOP10Q9NPE3 64 aaKnown RBP12.15□□□□□ -0.46
IRF1-202ENST00000405885 TNFRSF6BO95407 300 aa12.14□□□□□ -0.47
IRF1-202ENST00000405885 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
IRF1-202ENST00000405885 EMP1P54849 157 aa12.14□□□□□ -0.47
IRF1-202ENST00000405885 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
IRF1-202ENST00000405885 NRACQ8N912 160 aa12.14□□□□□ -0.47
IRF1-202ENST00000405885 S100A2P29034 98 aa12.14□□□□□ -0.47
IRF1-202ENST00000405885 Q6ZTI0 123 aa12.14□□□□□ -0.47
IRF1-202ENST00000405885 NACAE9PAV3 2078 aa12.13□□□□□ -0.47
IRF1-202ENST00000405885 TRGV1A0A0A0MS02 117 aa12.13□□□□□ -0.47
IRF1-202ENST00000405885 F5H697 171 aa12.13□□□□□ -0.47
IRF1-202ENST00000405885 RASL10AQ92737 203 aa12.13□□□□□ -0.47
IRF1-202ENST00000405885 X6R8D5 127 aa12.13□□□□□ -0.47
IRF1-202ENST00000405885 KIR2DL5BA0A0G2JN68 375 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 KIR2DL5BA0A0G2JPC4 375 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 PMCHP20382 165 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 SUMO4Q6EEV6 95 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 KIR2DL5AQ8N109 375 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 PPBPP02775 128 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 APOC4P55056 127 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 ZNF56Q15929 161 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
IRF1-202ENST00000405885 CFAP126Q5VTH2 177 aa12.11□□□□□ -0.47
IRF1-202ENST00000405885 SPXQ9BT56 116 aa12.11□□□□□ -0.47
IRF1-202ENST00000405885 DEFB4AO15263 64 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 LINC00614P0C842 121 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 ESDP10768 282 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 PRSS3P2Q8NHM4 247 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 MRAP2Q96G30 205 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 Q6ZSN1 163 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 OR10D4PQ8NGN7 298 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 DEFB104AQ8WTQ1 72 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 PACRGQ96M98 296 aaPredicted RBP12.1□□□□□ -0.47
IRF1-202ENST00000405885 Q9UF83 564 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 TENM3Q9P273 2699 aa12.1□□□□□ -0.47
IRF1-202ENST00000405885 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
IRF1-202ENST00000405885 HSBP1O75506 76 aa12.09□□□□□ -0.47
IRF1-202ENST00000405885 P0DMU3 169 aa12.09□□□□□ -0.47
IRF1-202ENST00000405885 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
IRF1-202ENST00000405885 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
IRF1-202ENST00000405885 AMTP48728 403 aa12.09□□□□□ -0.47
IRF1-202ENST00000405885 OR11H2Q8NH07 326 aa12.09□□□□□ -0.47
IRF1-202ENST00000405885 IGHV3-53P01767 116 aa12.08□□□□□ -0.48
IRF1-202ENST00000405885 DAZ2Q13117 558 aaKnown RBP12.08□□□□□ -0.48
IRF1-202ENST00000405885 ZMAT5Q9UDW3 170 aaKnown RBP12.08□□□□□ -0.48
IRF1-202ENST00000405885 GAGE12BA1L429 117 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 A8MWV9 139 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 GAGE7O76087 117 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 NEGR1Q7Z3B1 354 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 MAP1LC3AQ9H492 121 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 IGHV1-24A0A0C4DH33 117 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 M0QY20 66 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 PTH2Q96A98 100 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 RETNQ9HD89 108 aa12.07□□□□□ -0.48
IRF1-202ENST00000405885 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
IRF1-202ENST00000405885 AP5S1Q9NUS5 200 aa12.06□□□□□ -0.48
IRF1-202ENST00000405885 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
IRF1-202ENST00000405885 PIK3CD-AS1Q5SR53 167 aa12.06□□□□□ -0.48
IRF1-202ENST00000405885 IGLV2-18A0A075B6J9 118 aa12.05□□□□□ -0.48
IRF1-202ENST00000405885 RS1O15537 224 aa12.05□□□□□ -0.48
IRF1-202ENST00000405885 SUMO2P61956 95 aaKnown RBP12.05□□□□□ -0.48
IRF1-202ENST00000405885 Q6ZWC4 215 aa12.05□□□□□ -0.48
IRF1-202ENST00000405885 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
IRF1-202ENST00000405885 OVOL2Q9BRP0 275 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms