RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CR1P17927 2039 aa14.9□□□□□ -0.02
CCDC47-202ENST00000403162 HOXA3O43365 443 aaPredicted RBP14.9□□□□□ -0.02
CCDC47-202ENST00000403162 SCGB1A1P11684 91 aa14.9□□□□□ -0.02
CCDC47-202ENST00000403162 DEFB1P60022 68 aa14.9□□□□□ -0.02
CCDC47-202ENST00000403162 CD300EQ496F6 205 aaPredicted RBP14.9□□□□□ -0.02
CCDC47-202ENST00000403162 AMTNQ6UX39 209 aa14.9□□□□□ -0.02
CCDC47-202ENST00000403162 IGHV1-69DA0A0B4J2H0 117 aa14.9□□□□□ -0.02
CCDC47-202ENST00000403162 GNRH2O43555 120 aa14.9□□□□□ -0.02
CCDC47-202ENST00000403162 GATA3P23771 443 aa14.9□□□□□ -0.02
CCDC47-202ENST00000403162 LINC01549A6NIU2 74 aa14.89□□□□□ -0.03
CCDC47-202ENST00000403162 H3BUA1 57 aa14.89□□□□□ -0.03
CCDC47-202ENST00000403162 USMG5Q96IX5 58 aa14.89□□□□□ -0.03
CCDC47-202ENST00000403162 SIGMAR1Q99720 223 aa14.89□□□□□ -0.03
CCDC47-202ENST00000403162 IGHV4OR15-8A0A075B7B6 117 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 A0A087WW49 117 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 TMEM238LA0A1B0GVL6 79 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 A6NJY4 79 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 ZNF815PA8K554 130 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 SCGB2A2Q13296 93 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 ETDBQ3ZM63 59 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 TSSC4Q9Y5U2 329 aaPredicted RBP14.88□□□□□ -0.03
CCDC47-202ENST00000403162 KIF25-AS1Q9Y6Z4 181 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 IGHV3OR16-10A0A075B7F0 116 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 SH2D6Q7Z4S9 175 aa14.88□□□□□ -0.03
CCDC47-202ENST00000403162 SVEP1Q4LDE5 3571 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 GAGE12HA6NDE8 117 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 IGHV1-69P01742 117 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 CRYGDP07320 174 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 LINC00315P59091 139 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 SPATA25Q9BR10 227 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 F6UB75 175 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 AZU1P20160 251 aa14.87□□□□□ -0.03
CCDC47-202ENST00000403162 SPAG8Q99932 426 aaPredicted RBP14.87□□□□□ -0.03
CCDC47-202ENST00000403162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.86□□□□□ -0.036e-7■■■□□ 17.9
CCDC47-202ENST00000403162 DUSP14O95147 198 aaKnown RBP14.86□□□□□ -0.03
CCDC47-202ENST00000403162 UBE2D1P51668 147 aa14.86□□□□□ -0.03
CCDC47-202ENST00000403162 PAPPA-AS1Q5QFB9 102 aa14.86□□□□□ -0.03
CCDC47-202ENST00000403162 PGPEP1Q9NXJ5 209 aa14.86□□□□□ -0.03
CCDC47-202ENST00000403162 RPL11P62913 178 aaKnown RBP14.85□□□□□ -0.03
CCDC47-202ENST00000403162 SCGB1D4Q6XE38 83 aa14.85□□□□□ -0.03
CCDC47-202ENST00000403162 IGLV4-69A0A075B6H9 119 aa14.85□□□□□ -0.03
CCDC47-202ENST00000403162 AVPP01185 164 aa14.85□□□□□ -0.03
CCDC47-202ENST00000403162 PLEKHB2Q96CS7 222 aa14.85□□□□□ -0.03
CCDC47-202ENST00000403162 GTSF1LQ9H1H1 148 aa14.85□□□□□ -0.03
CCDC47-202ENST00000403162 MUC4Q99102 2169 aa14.85□□□□□ -0.03
CCDC47-202ENST00000403162 KLLNB2CW77 178 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 J3QLI3 93 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 TSHBP01222 138 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 CREBBPQ92793 2442 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 IGIPA6NJ69 53 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 IGHG2P01859 326 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 IGHV4-38-2P0DP08 117 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 POLR2KP53803 58 aaKnown RBP14.84□□□□□ -0.03
CCDC47-202ENST00000403162 MRPL16Q9NX20 251 aaKnown RBP14.84□□□□□ -0.03
CCDC47-202ENST00000403162 ITPR3Q14573 2671 aa14.84□□□□□ -0.03
CCDC47-202ENST00000403162 C11orf86A6NJI1 115 aa14.83□□□□□ -0.04
CCDC47-202ENST00000403162 BRD3OSQ6XYD6 125 aa14.83□□□□□ -0.04
CCDC47-202ENST00000403162 RHPN1-AS1Q9BWJ2 59 aa14.83□□□□□ -0.04
CCDC47-202ENST00000403162 TP53TG1Q9Y2A0 90 aa14.83□□□□□ -0.04
CCDC47-202ENST00000403162 IGHV3-11P01762 117 aa14.83□□□□□ -0.04
CCDC47-202ENST00000403162 HERVK_113P61574 105 aa14.83□□□□□ -0.04
CCDC47-202ENST00000403162 ZFP2Q6ZN57 461 aa14.83□□□□□ -0.04
CCDC47-202ENST00000403162 SRSF9Q13242 221 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC47-202ENST00000403162 PMVKQ15126 192 aa14.82□□□□□ -0.04
CCDC47-202ENST00000403162 MTURNQ8N3F0 131 aa14.82□□□□□ -0.04
CCDC47-202ENST00000403162 DLX4Q92988 240 aaPredicted RBP14.82□□□□□ -0.04
CCDC47-202ENST00000403162 TMEM141Q96I45 108 aa14.82□□□□□ -0.04
CCDC47-202ENST00000403162 AKAP9Q99996 3911 aa14.82□□□□□ -0.04
CCDC47-202ENST00000403162 TIMM17AQ99595 171 aa14.81□□□□□ -0.04
CCDC47-202ENST00000403162 NOTCH2Q04721 2471 aa14.81□□□□□ -0.04
CCDC47-202ENST00000403162 VCYO14598 125 aa14.81□□□□□ -0.04
CCDC47-202ENST00000403162 CD7P09564 240 aa14.81□□□□□ -0.04
CCDC47-202ENST00000403162 SUMO4Q6EEV6 95 aa14.81□□□□□ -0.04
CCDC47-202ENST00000403162 DAZ1Q9NQZ3 744 aaKnown RBP14.81□□□□□ -0.04
CCDC47-202ENST00000403162 ZANQ9Y493 2812 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 TSPAN13O95857 204 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 CFAP126Q5VTH2 177 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 FAM159AQ6UWV7 190 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 LCNL1Q6ZST4 164 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 KLHL30-AS1Q8NEE0 82 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 ATP6V0E2Q8NHE4 81 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 IGKV3-7A0A075B6H7 116 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 PF4V1P10720 104 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 SMAGPQ0VAQ4 97 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 KIR2DL4Q99706 377 aa14.8□□□□□ -0.04
CCDC47-202ENST00000403162 A0A0J9YY99 117 aa14.79□□□□□ -0.04
CCDC47-202ENST00000403162 A6NDX4 124 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 UBE2D3P61077 147 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 UBE2D2P62837 147 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 APOMO95445 188 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 INSL3P51460 131 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 LY6EQ16553 131 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 C1QTNF4Q9BXJ3 329 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 JPT2Q9H910 190 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 CELSR1Q9NYQ6 3014 aa14.78□□□□□ -0.04
CCDC47-202ENST00000403162 ZNF469Q96JG9 3925 aaPredicted RBP14.77□□□□□ -0.04
CCDC47-202ENST00000403162 TRBV6-5A0A0K0K1A5 114 aa14.77□□□□□ -0.04
CCDC47-202ENST00000403162 LGALS9O00182 355 aa14.77□□□□□ -0.04
CCDC47-202ENST00000403162 IGLV1-40P01703 118 aa14.77□□□□□ -0.04
CCDC47-202ENST00000403162 ID1P41134 155 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms