RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 A4D1N5 150 aa13□□□□□ -0.33
PTPRA-205ENST00000399903 EPG5Q9HCE0 2579 aa13□□□□□ -0.33
PTPRA-205ENST00000399903 C15orf32Q32M92 178 aa13□□□□□ -0.33
PTPRA-205ENST00000399903 C15orf53Q8NAA6 179 aa13□□□□□ -0.33
PTPRA-205ENST00000399903 CREBBPQ92793 2442 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 C19orf84I3L1E1 186 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 LGALS3P17931 250 aaKnown RBP12.99□□□□□ -0.33
PTPRA-205ENST00000399903 GNLYP22749 145 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 RPL32P62910 135 aaKnown RBP12.99□□□□□ -0.33
PTPRA-205ENST00000399903 C16orf92Q96LL3 132 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 VCX2Q9H322 139 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 DPM3Q9P2X0 92 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 PRSS2P07478 247 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 TSPEAR-AS2P59090 65 aa12.99□□□□□ -0.33
PTPRA-205ENST00000399903 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 NPC2P61916 151 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 Q8N1Y9 231 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 TIMD4Q96H15 378 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 SLC50A1Q9BRV3 221 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 ADARB2-AS1A8MUL3 147 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 TMEM95Q3KNT9 176 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 PRR9Q5T870 116 aa12.98□□□□□ -0.33
PTPRA-205ENST00000399903 ZNF462Q96JM2 2506 aa12.97□□□□□ -0.33
PTPRA-205ENST00000399903 RHODO00212 210 aa12.97□□□□□ -0.33
PTPRA-205ENST00000399903 ZFP36P26651 326 aaKnown RBP12.97□□□□□ -0.33
PTPRA-205ENST00000399903 FBXL19-AS1Q494R0 122 aa12.97□□□□□ -0.33
PTPRA-205ENST00000399903 COX8CQ7Z4L0 72 aa12.97□□□□□ -0.33
PTPRA-205ENST00000399903 SORL1Q92673 2214 aa12.97□□□□□ -0.33
PTPRA-205ENST00000399903 MEIG1Q5JSS6 88 aa12.96□□□□□ -0.33
PTPRA-205ENST00000399903 OPRPNQ99935 248 aaPredicted RBP12.96□□□□□ -0.33
PTPRA-205ENST00000399903 ZNF256Q9Y2P7 627 aaPredicted RBP12.96□□□□□ -0.33
PTPRA-205ENST00000399903 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.34
PTPRA-205ENST00000399903 ELANEP08246 267 aa12.96□□□□□ -0.34
PTPRA-205ENST00000399903 FAM74A4Q5TZK3 123 aa12.96□□□□□ -0.34
PTPRA-205ENST00000399903 GNRH2O43555 120 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 CITED1Q99966 193 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 ABCA12Q86UK0 2595 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 COX6B1P14854 86 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 RNASE4P34096 147 aaKnown RBP12.95□□□□□ -0.34
PTPRA-205ENST00000399903 A0A087WWL8 130 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 LINC01619G3V211 115 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 BUB3O43684 328 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 DPH3P1Q9H4G8 78 aa12.95□□□□□ -0.34
PTPRA-205ENST00000399903 JPT2Q9H910 190 aa12.94□□□□□ -0.34
PTPRA-205ENST00000399903 ZANQ9Y493 2812 aa12.94□□□□□ -0.34
PTPRA-205ENST00000399903 ZNF56Q15929 161 aa12.94□□□□□ -0.34
PTPRA-205ENST00000399903 J3QQQ9 107 aa12.93□□□□□ -0.34
PTPRA-205ENST00000399903 TMEM190Q8WZ59 177 aa12.93□□□□□ -0.34
PTPRA-205ENST00000399903 LINC00527Q9UJ94 153 aa12.93□□□□□ -0.34
PTPRA-205ENST00000399903 PTPN13Q12923 2485 aa12.93□□□□□ -0.34
PTPRA-205ENST00000399903 CRYGDP07320 174 aa12.93□□□□□ -0.34
PTPRA-205ENST00000399903 SRSF2Q01130 221 aaKnown RBP12.93□□□□□ -0.34
PTPRA-205ENST00000399903 F6UB75 175 aa12.92□□□□□ -0.34
PTPRA-205ENST00000399903 ASIPP42127 132 aa12.92□□□□□ -0.34
PTPRA-205ENST00000399903 MUSTN1Q8IVN3 82 aa12.92□□□□□ -0.34
PTPRA-205ENST00000399903 CHCHD5Q9BSY4 110 aa12.92□□□□□ -0.34
PTPRA-205ENST00000399903 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
PTPRA-205ENST00000399903 VMO1Q7Z5L0 202 aa12.92□□□□□ -0.34
PTPRA-205ENST00000399903 G3V318 75 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 TLN2Q9Y4G6 2542 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 DOPEY2Q9Y3R5 2298 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 SRD5A1P18405 259 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 PMVKQ15126 192 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 RNF5Q99942 180 aa12.91□□□□□ -0.34
PTPRA-205ENST00000399903 LINC01620Q4KN68 170 aa12.9□□□□□ -0.34
PTPRA-205ENST00000399903 SLC25A29Q8N8R3 303 aa12.9□□□□□ -0.34
PTPRA-205ENST00000399903 METTL26Q96S19 204 aa12.9□□□□□ -0.34
PTPRA-205ENST00000399903 DOPEY1Q5JWR5 2465 aa12.9□□□□□ -0.34
PTPRA-205ENST00000399903 IGLV4-69A0A075B6H9 119 aa12.9□□□□□ -0.34
PTPRA-205ENST00000399903 BPESC1Q9GZL8 116 aa12.9□□□□□ -0.34
PTPRA-205ENST00000399903 ZNRF2Q8NHG8 242 aa12.9□□□□□ -0.35
PTPRA-205ENST00000399903 TSHBP01222 138 aa12.89□□□□□ -0.35
PTPRA-205ENST00000399903 IGHV3-33P01772 117 aa12.89□□□□□ -0.35
PTPRA-205ENST00000399903 LY6LH3BQJ8 138 aa12.89□□□□□ -0.35
PTPRA-205ENST00000399903 ATXN8Q156A1 80 aa12.89□□□□□ -0.35
PTPRA-205ENST00000399903 ZNF580Q9UK33 172 aa12.89□□□□□ -0.35
PTPRA-205ENST00000399903 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
PTPRA-205ENST00000399903 H3BMM0 161 aa12.88□□□□□ -0.35
PTPRA-205ENST00000399903 UBE2WQ96B02 151 aa12.88□□□□□ -0.35
PTPRA-205ENST00000399903 USP24Q9UPU5 2620 aa12.88□□□□□ -0.35
PTPRA-205ENST00000399903 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
PTPRA-205ENST00000399903 ITLN2Q8WWU7 325 aaPredicted RBP12.88□□□□□ -0.35
PTPRA-205ENST00000399903 PSMG3-AS1Q96PY0 264 aa12.88□□□□□ -0.35
PTPRA-205ENST00000399903 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
PTPRA-205ENST00000399903 Q6ZSV7 163 aa12.87□□□□□ -0.35
PTPRA-205ENST00000399903 SBSPONQ8IVN8 264 aa12.87□□□□□ -0.35
PTPRA-205ENST00000399903 ODF3Q96PU9 254 aa12.87□□□□□ -0.35
PTPRA-205ENST00000399903 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
PTPRA-205ENST00000399903 CLEC2BQ92478 149 aa12.86□□□□□ -0.35
PTPRA-205ENST00000399903 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
PTPRA-205ENST00000399903 IGHV7-81A0A0B4J1V7 117 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 FAM110AQ9BQ89 295 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 SPXQ9BT56 116 aa12.85□□□□□ -0.35
PTPRA-205ENST00000399903 ZFAND3Q9H8U3 227 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms