RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 ABCA1O95477 2261 aa16.52■□□□□ 0.23
ANKRD28-201ENST00000399451 PRAC2D3DTV9 90 aa16.52■□□□□ 0.23
ANKRD28-201ENST00000399451 ODF3L1Q8IXM7 274 aa16.52■□□□□ 0.23
ANKRD28-201ENST00000399451 SPANXCQ9NY87 97 aa16.52■□□□□ 0.23
ANKRD28-201ENST00000399451 MRPL36Q9P0J6 103 aaKnown RBP16.52■□□□□ 0.23
ANKRD28-201ENST00000399451 UBE2AP49459 152 aa16.51■□□□□ 0.23
ANKRD28-201ENST00000399451 DENND4CQ5VZ89 1909 aa16.51■□□□□ 0.23
ANKRD28-201ENST00000399451 C4orf48Q5BLP8 95 aa16.51■□□□□ 0.23
ANKRD28-201ENST00000399451 A4D1N5 150 aa16.51■□□□□ 0.23
ANKRD28-201ENST00000399451 BAALCQ8WXS3 180 aa16.51■□□□□ 0.23
ANKRD28-201ENST00000399451 HHLA3Q9XRX5 114 aa16.5■□□□□ 0.23
ANKRD28-201ENST00000399451 SND1-IT1Q9HBX3 110 aa16.5■□□□□ 0.23
ANKRD28-201ENST00000399451 HIGD1BQ9P298 99 aa16.5■□□□□ 0.23
ANKRD28-201ENST00000399451 COX7B2Q8TF08 81 aa16.5■□□□□ 0.23
ANKRD28-201ENST00000399451 MED14OSP0DP75 135 aa16.49■□□□□ 0.23
ANKRD28-201ENST00000399451 NCKAP5O14513 1909 aa16.49■□□□□ 0.23
ANKRD28-201ENST00000399451 H0YGX0 51 aa16.49■□□□□ 0.23
ANKRD28-201ENST00000399451 IL17DQ8TAD2 202 aa16.49■□□□□ 0.23
ANKRD28-201ENST00000399451 CTRLP40313 264 aa16.49■□□□□ 0.23
ANKRD28-201ENST00000399451 Q8N1Y9 231 aa16.49■□□□□ 0.23
ANKRD28-201ENST00000399451 TRBV6-1A0A0K0K1D8 114 aa16.49■□□□□ 0.23
ANKRD28-201ENST00000399451 FANCD2OSQ96PS1 177 aa16.48■□□□□ 0.23
ANKRD28-201ENST00000399451 RPL39P62891 51 aaKnown RBP16.48■□□□□ 0.23
ANKRD28-201ENST00000399451 DNAJC9-AS1A6NH13 148 aa16.48■□□□□ 0.23
ANKRD28-201ENST00000399451 FXYD2P54710 66 aa16.47■□□□□ 0.23
ANKRD28-201ENST00000399451 K7EMT4 169 aa16.46■□□□□ 0.23
ANKRD28-201ENST00000399451 ZGRF1Q86YA3 2104 aa16.46■□□□□ 0.23
ANKRD28-201ENST00000399451 HIST2H2BCQ6DN03 193 aa16.45■□□□□ 0.22
ANKRD28-201ENST00000399451 C11orf1Q9H5F2 150 aa16.45■□□□□ 0.22
ANKRD28-201ENST00000399451 NOTCH4Q99466 2003 aa16.45■□□□□ 0.22
ANKRD28-201ENST00000399451 IGLV1-47P01700 117 aa16.45■□□□□ 0.22
ANKRD28-201ENST00000399451 Q8N7P7 452 aa16.45■□□□□ 0.22
ANKRD28-201ENST00000399451 E7EUB6 86 aa16.45■□□□□ 0.22
ANKRD28-201ENST00000399451 PRORYQ9H606 182 aa16.45■□□□□ 0.22
ANKRD28-201ENST00000399451 E9PLD3 99 aa16.44■□□□□ 0.22
ANKRD28-201ENST00000399451 GPR179Q6PRD1 2367 aa16.44■□□□□ 0.22
ANKRD28-201ENST00000399451 EML6Q6ZMW3 1958 aa16.44■□□□□ 0.22
ANKRD28-201ENST00000399451 A0A0B4J2C4 111 aa16.44■□□□□ 0.22
ANKRD28-201ENST00000399451 RBM3P98179 157 aaKnown RBP16.44■□□□□ 0.22
ANKRD28-201ENST00000399451 TMEM258P61165 79 aa16.44■□□□□ 0.22
ANKRD28-201ENST00000399451 C11orf86A6NJI1 115 aa16.43■□□□□ 0.22
ANKRD28-201ENST00000399451 LINC01620Q4KN68 170 aa16.43■□□□□ 0.22
ANKRD28-201ENST00000399451 CITED1Q99966 193 aa16.43■□□□□ 0.22
ANKRD28-201ENST00000399451 FUSP35637 526 aaKnown RBP eCLIP16.43■□□□□ 0.229e-7■□□□□ 8.3
ANKRD28-201ENST00000399451 SEM1Q6ZVN7 128 aa16.43■□□□□ 0.22
ANKRD28-201ENST00000399451 TRBV7-3A0A075B6L6 115 aa16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 IGHV4-28A0A0C4DH34 117 aa16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 TAX1BP3O14907 124 aa16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 TEN1Q86WV5 123 aa16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 KIF26AQ9ULI4 1882 aaPredicted RBP16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 B5MCH6 92 aa16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 NDUFA1O15239 70 aa16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 INSL3P51460 131 aa16.42■□□□□ 0.22
ANKRD28-201ENST00000399451 TTTY13Q9BZ97 58 aa16.41■□□□□ 0.22
ANKRD28-201ENST00000399451 IGHG2P01859 326 aa16.41■□□□□ 0.22
ANKRD28-201ENST00000399451 GPHB5Q86YW7 130 aa16.41■□□□□ 0.22
ANKRD28-201ENST00000399451 OPRPNQ99935 248 aaPredicted RBP16.41■□□□□ 0.22
ANKRD28-201ENST00000399451 DAND5Q8N907 189 aa16.41■□□□□ 0.22
ANKRD28-201ENST00000399451 C19orf71A6NCJ1 209 aa16.4■□□□□ 0.22
ANKRD28-201ENST00000399451 GTF3C1Q12789 2109 aa16.4■□□□□ 0.22
ANKRD28-201ENST00000399451 H3BQ85 93 aa16.4■□□□□ 0.22
ANKRD28-201ENST00000399451 SS18L2Q9UHA2 77 aa16.4■□□□□ 0.22
ANKRD28-201ENST00000399451 A0A1W2PNU3 283 aaPredicted RBP16.39■□□□□ 0.21
ANKRD28-201ENST00000399451 FRMD6-AS1P0C7T7 363 aa16.39■□□□□ 0.21
ANKRD28-201ENST00000399451 ODF1Q14990 250 aa16.39■□□□□ 0.21
ANKRD28-201ENST00000399451 TMEM89A2RUT3 159 aa16.39■□□□□ 0.21
ANKRD28-201ENST00000399451 NCR3O14931 201 aa16.38■□□□□ 0.21
ANKRD28-201ENST00000399451 WFDC2Q14508 124 aa16.38■□□□□ 0.21
ANKRD28-201ENST00000399451 C11orf45Q8TAV5 145 aa16.38■□□□□ 0.21
ANKRD28-201ENST00000399451 RNF183Q96D59 192 aa16.38■□□□□ 0.21
ANKRD28-201ENST00000399451 KLK12Q9UKR0 248 aa16.38■□□□□ 0.21
ANKRD28-201ENST00000399451 NDUFA11Q86Y39 141 aa16.37■□□□□ 0.21
ANKRD28-201ENST00000399451 LOXL1Q08397 574 aaPredicted RBP16.37■□□□□ 0.21
ANKRD28-201ENST00000399451 VSIG2Q96IQ7 327 aa16.37■□□□□ 0.21
ANKRD28-201ENST00000399451 COL4A3Q01955 1670 aa16.37■□□□□ 0.21
ANKRD28-201ENST00000399451 SIRPDQ9H106 197 aa16.37■□□□□ 0.21
ANKRD28-201ENST00000399451 INAFM1C9JVW0 142 aa16.36■□□□□ 0.21
ANKRD28-201ENST00000399451 NDUFB1O75438 58 aa16.36■□□□□ 0.21
ANKRD28-201ENST00000399451 LGALS9O00182 355 aa16.36■□□□□ 0.21
ANKRD28-201ENST00000399451 Q8NA96 180 aa16.36■□□□□ 0.21
ANKRD28-201ENST00000399451 ADAMTS9Q9P2N4 1935 aa16.36■□□□□ 0.21
ANKRD28-201ENST00000399451 LRRC75A-AS1Q8N1F1 130 aa16.35■□□□□ 0.21
ANKRD28-201ENST00000399451 IGKV3D-7A0A0C4DH55 119 aa16.35■□□□□ 0.21
ANKRD28-201ENST00000399451 FOXI1Q12951 378 aa16.35■□□□□ 0.21
ANKRD28-201ENST00000399451 TRBV10-2A0A0K0K1G8 114 aa16.35■□□□□ 0.21
ANKRD28-201ENST00000399451 ATOX1O00244 68 aa16.35■□□□□ 0.21
ANKRD28-201ENST00000399451 P0C879 139 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 SPRY4Q9C004 299 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 DEFB1P60022 68 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 NBASA2RRP1 2371 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 IGKV1D-37A0A075B6S9 117 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 A6NDX4 124 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 PCNX1Q96RV3 2341 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 PROP1O75360 226 aa16.34■□□□□ 0.21
ANKRD28-201ENST00000399451 SPTAN1Q13813 2472 aaKnown RBP16.33■□□□□ 0.21
ANKRD28-201ENST00000399451 MSMPQ1L6U9 139 aa16.33■□□□□ 0.2
ANKRD28-201ENST00000399451 IGHV1-58A0A0C4DH39 117 aa16.33■□□□□ 0.2
ANKRD28-201ENST00000399451 CHKB-CPT1BH3BT56 60 aa16.33■□□□□ 0.2
ANKRD28-201ENST00000399451 CXCL5P42830 114 aa16.33■□□□□ 0.2
ANKRD28-201ENST00000399451 TMEM61Q8N0U2 210 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms