RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 TRAV12-3A0A0B4J271 114 aa19.09■□□□□ 0.65
COL13A1-203ENST00000398969 TMEM95Q3KNT9 176 aa19.09■□□□□ 0.65
COL13A1-203ENST00000398969 ZFP2Q6ZN57 461 aa19.09■□□□□ 0.65
COL13A1-203ENST00000398969 CD7P09564 240 aa19.09■□□□□ 0.65
COL13A1-203ENST00000398969 SAMD13Q5VXD3 122 aa19.09■□□□□ 0.65
COL13A1-203ENST00000398969 ANKRD17O75179 2603 aaKnown RBP19.09■□□□□ 0.65
COL13A1-203ENST00000398969 A0A087WWL8 130 aa19.08■□□□□ 0.65
COL13A1-203ENST00000398969 IGIPA6NJ69 53 aa19.08■□□□□ 0.65
COL13A1-203ENST00000398969 ZNF815PA8K554 130 aa19.08■□□□□ 0.65
COL13A1-203ENST00000398969 AVPP01185 164 aa19.08■□□□□ 0.65
COL13A1-203ENST00000398969 SCGB2A2Q13296 93 aa19.08■□□□□ 0.64
COL13A1-203ENST00000398969 CENPEQ02224 2701 aa19.07■□□□□ 0.64
COL13A1-203ENST00000398969 IGLV4-69A0A075B6H9 119 aa19.07■□□□□ 0.64
COL13A1-203ENST00000398969 F8W1H4 67 aa19.07■□□□□ 0.64
COL13A1-203ENST00000398969 KRTAP10-9P60411 292 aa19.07■□□□□ 0.64
COL13A1-203ENST00000398969 DEFB104AQ8WTQ1 72 aa19.07■□□□□ 0.64
COL13A1-203ENST00000398969 POLQO75417 2590 aa19.06■□□□□ 0.64
COL13A1-203ENST00000398969 A0A096LNT2 108 aa19.06■□□□□ 0.64
COL13A1-203ENST00000398969 LINC01549A6NIU2 74 aa19.06■□□□□ 0.64
COL13A1-203ENST00000398969 C11orf86A6NJI1 115 aa19.06■□□□□ 0.64
COL13A1-203ENST00000398969 H3BMG7 143 aa19.06■□□□□ 0.64
COL13A1-203ENST00000398969 VCYO14598 125 aa19.06■□□□□ 0.64
COL13A1-203ENST00000398969 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL13A1-203ENST00000398969 PSMB8P28062 276 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 PTPN13Q12923 2485 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 PLEKHB2Q96CS7 222 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 ZNF580Q9UK33 172 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 F5H697 171 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 GATA3P23771 443 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 WFDC2Q14508 124 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 CD300EQ496F6 205 aaPredicted RBP19.05■□□□□ 0.64
COL13A1-203ENST00000398969 KIR2DL4Q99706 377 aa19.05■□□□□ 0.64
COL13A1-203ENST00000398969 RPL39P62891 51 aaKnown RBP19.04■□□□□ 0.64
COL13A1-203ENST00000398969 PMVKQ15126 192 aa19.04■□□□□ 0.64
COL13A1-203ENST00000398969 MORN3Q6PF18 240 aaPredicted RBP19.04■□□□□ 0.64
COL13A1-203ENST00000398969 AMTNQ6UX39 209 aa19.04■□□□□ 0.64
COL13A1-203ENST00000398969 SCGB1D4Q6XE38 83 aa19.04■□□□□ 0.64
COL13A1-203ENST00000398969 USP9YO00507 2555 aaPredicted RBP19.04■□□□□ 0.64
COL13A1-203ENST00000398969 SDHAF1A6NFY7 115 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 ZNF688P0C7X2 276 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 PAPPA-AS1Q5QFB9 102 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 LINC01356Q8N9X3 169 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 TMEM141Q96I45 108 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 LGALS9O00182 355 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 HOXA3O43365 443 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-203ENST00000398969 EMP1P54849 157 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 KLHL30-AS1Q8NEE0 82 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 C9orf85Q96MD7 179 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 ODF3Q96PU9 254 aa19.03■□□□□ 0.64
COL13A1-203ENST00000398969 SPANXB1Q9NS25 103 aaPredicted RBP19.03■□□□□ 0.64
COL13A1-203ENST00000398969 IGHV3-16A0A0C4DH30 117 aa19.02■□□□□ 0.64
COL13A1-203ENST00000398969 TIMM17AQ99595 171 aa19.02■□□□□ 0.64
COL13A1-203ENST00000398969 TRBV6-5A0A0K0K1A5 114 aa19.01■□□□□ 0.63
COL13A1-203ENST00000398969 TRBV27A0A0K0K1C4 114 aa19.01■□□□□ 0.63
COL13A1-203ENST00000398969 C10orf99Q6UWK7 81 aa19.01■□□□□ 0.63
COL13A1-203ENST00000398969 FAM74A4Q5TZK3 123 aa19■□□□□ 0.63
COL13A1-203ENST00000398969 MDFICQ9P1T7 246 aa19■□□□□ 0.63
COL13A1-203ENST00000398969 TRAV12-2A0A075B6T6 113 aa19■□□□□ 0.63
COL13A1-203ENST00000398969 A0A0J9YX75 114 aa19■□□□□ 0.63
COL13A1-203ENST00000398969 HERVK_113P61574 105 aa19■□□□□ 0.63
COL13A1-203ENST00000398969 IGHV4-59P01825 116 aa18.99■□□□□ 0.63
COL13A1-203ENST00000398969 TMEM238LA0A1B0GVL6 79 aa18.99■□□□□ 0.63
COL13A1-203ENST00000398969 A6NJY4 79 aa18.99■□□□□ 0.63
COL13A1-203ENST00000398969 IGKV3-20P01619 116 aa18.99■□□□□ 0.63
COL13A1-203ENST00000398969 SRSF9Q13242 221 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL13A1-203ENST00000398969 MAPK1IP1LQ8NDC0 245 aa18.99■□□□□ 0.63
COL13A1-203ENST00000398969 PGPEP1Q9NXJ5 209 aa18.99■□□□□ 0.63
COL13A1-203ENST00000398969 GAGE13Q4V321 117 aa18.98■□□□□ 0.63
COL13A1-203ENST00000398969 PRO0461Q9UI25 63 aa18.98■□□□□ 0.63
COL13A1-203ENST00000398969 UBE2D1P51668 147 aa18.97■□□□□ 0.63
COL13A1-203ENST00000398969 SNRPD3P62318 126 aaKnown RBP18.97■□□□□ 0.63
COL13A1-203ENST00000398969 Q8N1Y9 231 aa18.97■□□□□ 0.63
COL13A1-203ENST00000398969 BEX4Q9NWD9 120 aaPredicted RBP18.97■□□□□ 0.63
COL13A1-203ENST00000398969 DEFB113Q30KQ7 82 aa18.97■□□□□ 0.63
COL13A1-203ENST00000398969 SYT8Q8NBV8 401 aa18.97■□□□□ 0.63
COL13A1-203ENST00000398969 MRPL16Q9NX20 251 aaKnown RBP18.97■□□□□ 0.63
COL13A1-203ENST00000398969 ABCA12Q86UK0 2595 aa18.96■□□□□ 0.63
COL13A1-203ENST00000398969 K7EQG2 157 aa18.96■□□□□ 0.63
COL13A1-203ENST00000398969 M0QY20 66 aa18.96■□□□□ 0.63
COL13A1-203ENST00000398969 DEFB112Q30KQ8 113 aa18.96■□□□□ 0.63
COL13A1-203ENST00000398969 CSPG4Q6UVK1 2322 aa18.96■□□□□ 0.63
COL13A1-203ENST00000398969 A0A0J9YY99 117 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 TGFAP01135 160 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 ZNF56Q15929 161 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 ZNF876PQ49A33 203 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 ZNRF2Q8NHG8 242 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 ZNF256Q9Y2P7 627 aaPredicted RBP18.95■□□□□ 0.62
COL13A1-203ENST00000398969 CHD6Q8TD26 2715 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 ETDBQ3ZM63 59 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 SH2D6Q7Z4S9 175 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 MTURNQ8N3F0 131 aa18.95■□□□□ 0.62
COL13A1-203ENST00000398969 TSPEAR-AS2P59090 65 aa18.94■□□□□ 0.62
COL13A1-203ENST00000398969 IGHV1OR15-1A0A075B7D0 117 aa18.94■□□□□ 0.62
COL13A1-203ENST00000398969 LRRC75A-AS1Q8N1F1 130 aa18.94■□□□□ 0.62
COL13A1-203ENST00000398969 NAV2Q8IVL1 2488 aa18.94■□□□□ 0.62
COL13A1-203ENST00000398969 TMEM89A2RUT3 159 aa18.93■□□□□ 0.62
COL13A1-203ENST00000398969 J3QLI3 93 aa18.93■□□□□ 0.62
COL13A1-203ENST00000398969 SPINK13Q1W4C9 94 aa18.93■□□□□ 0.62
COL13A1-203ENST00000398969 TMEM170BQ5T4T1 132 aa18.93■□□□□ 0.62
COL13A1-203ENST00000398969 NSUN5P1Q3KNT7 163 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms