RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 NUDT3O95989 172 aa12.1□□□□□ -0.47
CSNK1D-204ENST00000398519 FOXA3P55318 350 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-204ENST00000398519 FAM74A4Q5TZK3 123 aa12.1□□□□□ -0.47
CSNK1D-204ENST00000398519 GFRA4Q9GZZ7 299 aa12.1□□□□□ -0.47
CSNK1D-204ENST00000398519 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
CSNK1D-204ENST00000398519 Q6ZSN1 163 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 SEC11CQ9BY50 192 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 FAM231BA6NCW3 169 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 RHODO00212 210 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 WDR73Q6P4I2 378 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 SLC25A29Q8N8R3 303 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 PGLYRP4Q96LB8 373 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
CSNK1D-204ENST00000398519 DNAH1Q9P2D7 4330 aa12.08□□□□□ -0.48
CSNK1D-204ENST00000398519 NTF3P20783 257 aa12.08□□□□□ -0.48
CSNK1D-204ENST00000398519 C14orf178Q8N769 122 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-204ENST00000398519 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.48
CSNK1D-204ENST00000398519 A0A096LPF7 62 aa12.07□□□□□ -0.48
CSNK1D-204ENST00000398519 TRBV6-4A0A1B0GX49 114 aa12.07□□□□□ -0.48
CSNK1D-204ENST00000398519 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
CSNK1D-204ENST00000398519 SACSQ9NZJ4 4579 aa12.07□□□□□ -0.48
CSNK1D-204ENST00000398519 LOC100131303A0A0U1RQF7 123 aa12.06□□□□□ -0.48
CSNK1D-204ENST00000398519 TWIST1Q15672 202 aa12.06□□□□□ -0.48
CSNK1D-204ENST00000398519 RNF212Q495C1 297 aa12.06□□□□□ -0.48
CSNK1D-204ENST00000398519 LCE6AA0A183 80 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 SMIM27A0A1W2PRY6 76 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 GYPEP15421 78 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 RHOHQ15669 191 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 C10orf91Q5T1B1 145 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 LGALS9CQ6DKI2 356 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 NUP35Q8NFH5 326 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 ICOSQ9Y6W8 199 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 VPS13DQ5THJ4 4388 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 K7EQD1 137 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 EVI2AP22794 236 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 LINC00315P59091 139 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
CSNK1D-204ENST00000398519 LY6G6CO95867 125 aa12.04□□□□□ -0.48
CSNK1D-204ENST00000398519 MT-ND4LP03901 98 aa12.04□□□□□ -0.48
CSNK1D-204ENST00000398519 TRGC1P0CF51 173 aa12.04□□□□□ -0.48
CSNK1D-204ENST00000398519 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
CSNK1D-204ENST00000398519 PRADC1Q9BSG0 188 aa12.04□□□□□ -0.48
CSNK1D-204ENST00000398519 CARHSP1Q9Y2V2 147 aaKnown RBP12.04□□□□□ -0.48
CSNK1D-204ENST00000398519 A0A1B0GUT8 65 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 P0DMU3 169 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 ZNF56Q15929 161 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 MRPL23Q16540 153 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 BORCS7Q96B45 105 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 ANAPC16Q96DE5 110 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 Q9UF83 564 aa12.03□□□□□ -0.48
CSNK1D-204ENST00000398519 RAB4BP61018 213 aa12.02□□□□□ -0.49
CSNK1D-204ENST00000398519 SRIP30626 198 aa12.01□□□□□ -0.49
CSNK1D-204ENST00000398519 DPH3P1Q9H4G8 78 aa12.01□□□□□ -0.49
CSNK1D-204ENST00000398519 F5H697 171 aa12.01□□□□□ -0.49
CSNK1D-204ENST00000398519 MGPP08493 103 aa12.01□□□□□ -0.49
CSNK1D-204ENST00000398519 ESRGQ1W209 222 aa12.01□□□□□ -0.49
CSNK1D-204ENST00000398519 HYDINQ4G0P3 5121 aa12□□□□□ -0.49
CSNK1D-204ENST00000398519 RYR2Q92736 4967 aa12□□□□□ -0.49
CSNK1D-204ENST00000398519 NEGR1Q7Z3B1 354 aa12□□□□□ -0.49
CSNK1D-204ENST00000398519 LINC00694P0DN24 101 aa11.99□□□□□ -0.49
CSNK1D-204ENST00000398519 CCL18P55774 89 aa11.99□□□□□ -0.49
CSNK1D-204ENST00000398519 UBE2DNLQ8IWF7 75 aa11.99□□□□□ -0.49
CSNK1D-204ENST00000398519 SLC7A5P1Q8MH63 180 aa11.99□□□□□ -0.49
CSNK1D-204ENST00000398519 LINC00588Q9Y4M8 146 aa11.99□□□□□ -0.49
CSNK1D-204ENST00000398519 TRBV10-1A0A0K0K1A3 114 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 GAGE1Q13065 139 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 GAGE4Q13068 117 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 GAGE5Q13069 117 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 RIGQ13278 110 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 GAGE13Q4V321 117 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 SUMO4Q6EEV6 95 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 SMIM15Q7Z3B0 74 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 KMT2AQ03164 3969 aa11.98□□□□□ -0.49
CSNK1D-204ENST00000398519 FAM3BP58499 235 aaPredicted RBP11.97□□□□□ -0.49
CSNK1D-204ENST00000398519 RYR3Q15413 4870 aa11.97□□□□□ -0.49
CSNK1D-204ENST00000398519 M0QY20 66 aa11.96□□□□□ -0.49
CSNK1D-204ENST00000398519 LYPD5Q6UWN5 251 aa11.96□□□□□ -0.49
CSNK1D-204ENST00000398519 SH2D6Q7Z4S9 175 aa11.96□□□□□ -0.49
CSNK1D-204ENST00000398519 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.49
CSNK1D-204ENST00000398519 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
CSNK1D-204ENST00000398519 TMEM191AQ9H0A3 160 aa11.96□□□□□ -0.49
CSNK1D-204ENST00000398519 APOC3P02656 99 aa11.96□□□□□ -0.5
CSNK1D-204ENST00000398519 MRPL54Q6P161 138 aaKnown RBP11.96□□□□□ -0.5
CSNK1D-204ENST00000398519 NEXN-AS1Q8NBZ9 246 aa11.96□□□□□ -0.5
CSNK1D-204ENST00000398519 C7orf77A4D0Y5 90 aa11.95□□□□□ -0.5
CSNK1D-204ENST00000398519 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
CSNK1D-204ENST00000398519 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 A0A1B0GW15 77 aa11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 A0A1B0GXF2 115 aa11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 CAMPP49913 170 aa11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 RPL36AP83881 106 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 RHEBQ15382 184 aa11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 NDUFA5Q16718 116 aa11.94□□□□□ -0.5
CSNK1D-204ENST00000398519 ATP6V0E2Q8NHE4 81 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms