RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 F2Z2F3 143 aa17.74■□□□□ 0.43
U2AF1-203ENST00000398137 F8W036 122 aa17.74■□□□□ 0.43
U2AF1-203ENST00000398137 A0A087WWL8 130 aa17.73■□□□□ 0.43
U2AF1-203ENST00000398137 PNRC1Q12796 327 aaPredicted RBP17.73■□□□□ 0.43
U2AF1-203ENST00000398137 FAM74A4Q5TZK3 123 aa17.73■□□□□ 0.43
U2AF1-203ENST00000398137 TSKUQ8WUA8 353 aa17.73■□□□□ 0.43
U2AF1-203ENST00000398137 VSIG2Q96IQ7 327 aa17.73■□□□□ 0.43
U2AF1-203ENST00000398137 PRO0255Q9UI72 69 aa17.73■□□□□ 0.43
U2AF1-203ENST00000398137 PAX4O43316 350 aa17.72■□□□□ 0.43
U2AF1-203ENST00000398137 CACNG7P62955 275 aa17.72■□□□□ 0.43
U2AF1-203ENST00000398137 HHLA3Q9XRX5 114 aa17.72■□□□□ 0.43
U2AF1-203ENST00000398137 NUDT3O95989 172 aa17.71■□□□□ 0.43
U2AF1-203ENST00000398137 GATA1P15976 413 aaPredicted RBP17.71■□□□□ 0.43
U2AF1-203ENST00000398137 CRYBA4P53673 196 aa17.71■□□□□ 0.43
U2AF1-203ENST00000398137 C15orf53Q8NAA6 179 aa17.71■□□□□ 0.43
U2AF1-203ENST00000398137 PGLYRP4Q96LB8 373 aa17.71■□□□□ 0.43
U2AF1-203ENST00000398137 CIDEAO60543 219 aa17.7■□□□□ 0.42
U2AF1-203ENST00000398137 SLAQ13239 276 aa17.7■□□□□ 0.42
U2AF1-203ENST00000398137 UFSP1Q6NVU6 142 aa17.7■□□□□ 0.42
U2AF1-203ENST00000398137 ZFP2Q6ZN57 461 aa17.7■□□□□ 0.42
U2AF1-203ENST00000398137 AP1S3Q96PC3 154 aa17.7■□□□□ 0.42
U2AF1-203ENST00000398137 SEC11CQ9BY50 192 aa17.7■□□□□ 0.42
U2AF1-203ENST00000398137 MSRB1Q9NZV6 116 aa17.7■□□□□ 0.42
U2AF1-203ENST00000398137 HIGD1CA8MV81 97 aa17.69■□□□□ 0.42
U2AF1-203ENST00000398137 RHODO00212 210 aa17.69■□□□□ 0.42
U2AF1-203ENST00000398137 CRYGDP07320 174 aa17.69■□□□□ 0.42
U2AF1-203ENST00000398137 GFRA4Q9GZZ7 299 aa17.69■□□□□ 0.42
U2AF1-203ENST00000398137 Q6ZSN1 163 aa17.68■□□□□ 0.42
U2AF1-203ENST00000398137 CNFNQ9BYD5 112 aa17.68■□□□□ 0.42
U2AF1-203ENST00000398137 H3BNG1 76 aa17.67■□□□□ 0.42
U2AF1-203ENST00000398137 P0DMU3 169 aa17.67■□□□□ 0.42
U2AF1-203ENST00000398137 FAM231AP0DMU4 169 aa17.67■□□□□ 0.42
U2AF1-203ENST00000398137 FAM231CP0DMU5 169 aa17.67■□□□□ 0.42
U2AF1-203ENST00000398137 NTF3P20783 257 aa17.67■□□□□ 0.42
U2AF1-203ENST00000398137 RNF212Q495C1 297 aa17.67■□□□□ 0.42
U2AF1-203ENST00000398137 C14orf178Q8N769 122 aaPredicted RBP17.67■□□□□ 0.42
U2AF1-203ENST00000398137 HERC2O95714 4834 aa17.67■□□□□ 0.42
U2AF1-203ENST00000398137 FAM231BA6NCW3 169 aa17.66■□□□□ 0.42
U2AF1-203ENST00000398137 WDR73Q6P4I2 378 aa17.66■□□□□ 0.42
U2AF1-203ENST00000398137 SLC25A29Q8N8R3 303 aa17.66■□□□□ 0.42
U2AF1-203ENST00000398137 LOC100131303A0A0U1RQF7 123 aa17.65■□□□□ 0.42
U2AF1-203ENST00000398137 GYPEP15421 78 aa17.65■□□□□ 0.42
U2AF1-203ENST00000398137 FOXA3P55318 350 aaPredicted RBP17.65■□□□□ 0.42
U2AF1-203ENST00000398137 TWIST1Q15672 202 aa17.65■□□□□ 0.42
U2AF1-203ENST00000398137 ICOSQ9Y6W8 199 aa17.65■□□□□ 0.42
U2AF1-203ENST00000398137 TRBV6-4A0A1B0GX49 114 aa17.64■□□□□ 0.41
U2AF1-203ENST00000398137 SMIM27A0A1W2PRY6 76 aa17.64■□□□□ 0.41
U2AF1-203ENST00000398137 PPP1R2P9O14990 202 aa17.64■□□□□ 0.41
U2AF1-203ENST00000398137 BORCS7Q96B45 105 aa17.64■□□□□ 0.41
U2AF1-203ENST00000398137 A0A096LPF7 62 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 MT-ND4LP03901 98 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 TRGC1P0CF51 173 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 SMIM17P0DL12 118 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 RHOHQ15669 191 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 ZNF56Q15929 161 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 NUP35Q8NFH5 326 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 NAT8BQ9UHF3 227 aa17.63■□□□□ 0.41
U2AF1-203ENST00000398137 CARHSP1Q9Y2V2 147 aaKnown RBP17.63■□□□□ 0.41
U2AF1-203ENST00000398137 K7EQD1 137 aa17.62■□□□□ 0.41
U2AF1-203ENST00000398137 EVI2AP22794 236 aa17.62■□□□□ 0.41
U2AF1-203ENST00000398137 C10orf91Q5T1B1 145 aa17.62■□□□□ 0.41
U2AF1-203ENST00000398137 PRADC1Q9BSG0 188 aa17.62■□□□□ 0.41
U2AF1-203ENST00000398137 KIF25-AS1Q9Y6Z4 181 aa17.62■□□□□ 0.41
U2AF1-203ENST00000398137 A0A1B0GUT8 65 aa17.61■□□□□ 0.41
U2AF1-203ENST00000398137 MGPP08493 103 aa17.61■□□□□ 0.41
U2AF1-203ENST00000398137 ANAPC16Q96DE5 110 aa17.6■□□□□ 0.41
U2AF1-203ENST00000398137 PKHD1P08F94 4074 aa17.59■□□□□ 0.41
U2AF1-203ENST00000398137 F5H697 171 aa17.59■□□□□ 0.41
U2AF1-203ENST00000398137 M0R2N4 97 aa17.59■□□□□ 0.41
U2AF1-203ENST00000398137 MRPL23Q16540 153 aaKnown RBP17.59■□□□□ 0.41
U2AF1-203ENST00000398137 DYNC1H1Q14204 4646 aaKnown RBP17.59■□□□□ 0.41
U2AF1-203ENST00000398137 PKD1P98161 4303 aa17.58■□□□□ 0.41
U2AF1-203ENST00000398137 KIAA1109Q2LD37 5005 aa17.58■□□□□ 0.41
U2AF1-203ENST00000398137 A0A1B0GVY2 172 aa17.58■□□□□ 0.4
U2AF1-203ENST00000398137 RTL8CO15255 209 aa17.58■□□□□ 0.4
U2AF1-203ENST00000398137 SRIP30626 198 aa17.58■□□□□ 0.4
U2AF1-203ENST00000398137 LINC00315P59091 139 aa17.58■□□□□ 0.4
U2AF1-203ENST00000398137 RAB4BP61018 213 aa17.58■□□□□ 0.4
U2AF1-203ENST00000398137 SLC7A5P1Q8MH63 180 aa17.58■□□□□ 0.4
U2AF1-203ENST00000398137 DPH3P1Q9H4G8 78 aa17.58■□□□□ 0.4
U2AF1-203ENST00000398137 UBE2DNLQ8IWF7 75 aa17.57■□□□□ 0.4
U2AF1-203ENST00000398137 Q9UF83 564 aa17.57■□□□□ 0.4
U2AF1-203ENST00000398137 RIGQ13278 110 aa17.56■□□□□ 0.4
U2AF1-203ENST00000398137 Q6ZR54 194 aa17.56■□□□□ 0.4
U2AF1-203ENST00000398137 SMIM15Q7Z3B0 74 aa17.56■□□□□ 0.4
U2AF1-203ENST00000398137 GAGE12JA6NER3 117 aa17.55■□□□□ 0.4
U2AF1-203ENST00000398137 GAGE1Q13065 139 aa17.55■□□□□ 0.4
U2AF1-203ENST00000398137 GAGE4Q13068 117 aa17.55■□□□□ 0.4
U2AF1-203ENST00000398137 GAGE5Q13069 117 aa17.55■□□□□ 0.4
U2AF1-203ENST00000398137 GAGE13Q4V321 117 aa17.55■□□□□ 0.4
U2AF1-203ENST00000398137 IGLV2-18A0A075B6J9 118 aa17.54■□□□□ 0.4
U2AF1-203ENST00000398137 LINC00336Q6ZUF6 198 aa17.54■□□□□ 0.4
U2AF1-203ENST00000398137 NEGR1Q7Z3B1 354 aa17.54■□□□□ 0.4
U2AF1-203ENST00000398137 APOC3P02656 99 aa17.53■□□□□ 0.4
U2AF1-203ENST00000398137 NDUFA5Q16718 116 aa17.53■□□□□ 0.4
U2AF1-203ENST00000398137 SUMO4Q6EEV6 95 aa17.53■□□□□ 0.4
U2AF1-203ENST00000398137 MRPL54Q6P161 138 aaKnown RBP17.53■□□□□ 0.4
U2AF1-203ENST00000398137 CLRN3Q8NCR9 226 aa17.53■□□□□ 0.4
U2AF1-203ENST00000398137 DNAH11Q96DT5 4516 aa17.53■□□□□ 0.4
U2AF1-203ENST00000398137 CCL18P55774 89 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms