RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 HILS1P60008 231 aa11.05□□□□□ -0.64
CBX3-202ENST00000396386 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
CBX3-202ENST00000396386 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
CBX3-202ENST00000396386 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
CBX3-202ENST00000396386 ATP5LO75964 103 aa11.04□□□□□ -0.64
CBX3-202ENST00000396386 SETD2Q9BYW2 2564 aaPredicted RBP11.04□□□□□ -0.64
CBX3-202ENST00000396386 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
CBX3-202ENST00000396386 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
CBX3-202ENST00000396386 K7EMI3 77 aa11.04□□□□□ -0.64
CBX3-202ENST00000396386 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
CBX3-202ENST00000396386 LINC00315P59091 139 aa11.04□□□□□ -0.64
CBX3-202ENST00000396386 ORMDL2Q53FV1 153 aa11.04□□□□□ -0.64
CBX3-202ENST00000396386 SONP18583 2426 aaKnown RBP11.03□□□□□ -0.64
CBX3-202ENST00000396386 NUDT3O95989 172 aa11.03□□□□□ -0.64
CBX3-202ENST00000396386 ZNF124Q15973 351 aa11.03□□□□□ -0.64
CBX3-202ENST00000396386 BATFQ16520 125 aa11.03□□□□□ -0.64
CBX3-202ENST00000396386 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
CBX3-202ENST00000396386 MTORP42345 2549 aa11.03□□□□□ -0.64
CBX3-202ENST00000396386 CBY3A6NI87 242 aa11.02□□□□□ -0.64
CBX3-202ENST00000396386 NDUFA7O95182 113 aa11.02□□□□□ -0.64
CBX3-202ENST00000396386 RBMY1A1P0DJD3 496 aaKnown RBP11.02□□□□□ -0.64
CBX3-202ENST00000396386 RBMY1CP0DJD4 496 aa11.02□□□□□ -0.64
CBX3-202ENST00000396386 RBMY1FQ15415 496 aaKnown RBP11.02□□□□□ -0.64
CBX3-202ENST00000396386 SUMO4Q6EEV6 95 aa11.02□□□□□ -0.64
CBX3-202ENST00000396386 JPT2Q9H910 190 aa11.02□□□□□ -0.64
CBX3-202ENST00000396386 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.64
CBX3-202ENST00000396386 NF1P21359 2839 aa11.02□□□□□ -0.65
CBX3-202ENST00000396386 A0A087WWL8 130 aa11.02□□□□□ -0.65
CBX3-202ENST00000396386 NUTF2P61970 127 aaKnown RBP11.01□□□□□ -0.65
CBX3-202ENST00000396386 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
CBX3-202ENST00000396386 ODF1Q14990 250 aa11.01□□□□□ -0.65
CBX3-202ENST00000396386 JMJD8Q96S16 334 aa11.01□□□□□ -0.65
CBX3-202ENST00000396386 F5H697 171 aa11□□□□□ -0.65
CBX3-202ENST00000396386 PRSS1P07477 247 aa11□□□□□ -0.65
CBX3-202ENST00000396386 FAM74A4Q5TZK3 123 aa11□□□□□ -0.65
CBX3-202ENST00000396386 SMR3AQ99954 134 aa11□□□□□ -0.65
CBX3-202ENST00000396386 CSTL1Q9H114 145 aa11□□□□□ -0.65
CBX3-202ENST00000396386 DKK2Q9UBU2 259 aa11□□□□□ -0.65
CBX3-202ENST00000396386 COX8AP10176 69 aa11□□□□□ -0.65
CBX3-202ENST00000396386 TP73-AS1Q9UF72 201 aa11□□□□□ -0.65
CBX3-202ENST00000396386 INSP01308 110 aa10.99□□□□□ -0.65
CBX3-202ENST00000396386 ZNF56Q15929 161 aa10.99□□□□□ -0.65
CBX3-202ENST00000396386 ODF3L2Q3SX64 289 aa10.99□□□□□ -0.65
CBX3-202ENST00000396386 ANKRD39Q53RE8 183 aa10.99□□□□□ -0.65
CBX3-202ENST00000396386 CLUHP3Q96NS8 147 aa10.99□□□□□ -0.65
CBX3-202ENST00000396386 ZNF876PQ49A33 203 aa10.98□□□□□ -0.65
CBX3-202ENST00000396386 TOMM6Q96B49 74 aa10.98□□□□□ -0.65
CBX3-202ENST00000396386 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.98□□□□□ -0.65
CBX3-202ENST00000396386 LY6G6DO95868 133 aa10.98□□□□□ -0.65
CBX3-202ENST00000396386 ZNF415Q09FC8 603 aa10.98□□□□□ -0.65
CBX3-202ENST00000396386 COL5A1-AS1Q5SY13 56 aa10.98□□□□□ -0.65
CBX3-202ENST00000396386 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
CBX3-202ENST00000396386 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
CBX3-202ENST00000396386 CRYGDP07320 174 aa10.97□□□□□ -0.65
CBX3-202ENST00000396386 PROK1P58294 105 aa10.97□□□□□ -0.65
CBX3-202ENST00000396386 LINC00467Q9BRT7 94 aa10.97□□□□□ -0.65
CBX3-202ENST00000396386 OR11H12B2RN74 326 aa10.96□□□□□ -0.65
CBX3-202ENST00000396386 DPM2O94777 84 aa10.96□□□□□ -0.65
CBX3-202ENST00000396386 IGKCP01834 107 aa10.96□□□□□ -0.65
CBX3-202ENST00000396386 HTN1P15515 57 aa10.96□□□□□ -0.65
CBX3-202ENST00000396386 HINT1P49773 126 aaPredicted RBP10.96□□□□□ -0.65
CBX3-202ENST00000396386 STPG4Q8N801 248 aa10.96□□□□□ -0.65
CBX3-202ENST00000396386 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
CBX3-202ENST00000396386 G0S2P27469 103 aa10.95□□□□□ -0.66
CBX3-202ENST00000396386 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
CBX3-202ENST00000396386 C2orf66Q6UXQ4 117 aa10.95□□□□□ -0.66
CBX3-202ENST00000396386 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
CBX3-202ENST00000396386 STHQ8IWL8 128 aa10.95□□□□□ -0.66
CBX3-202ENST00000396386 A0A087WX48 190 aa10.95□□□□□ -0.66
CBX3-202ENST00000396386 VCYO14598 125 aa10.95□□□□□ -0.66
CBX3-202ENST00000396386 SAP30O75446 220 aa10.95□□□□□ -0.66
CBX3-202ENST00000396386 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
CBX3-202ENST00000396386 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 SDHAF1A6NFY7 115 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 ADARB2-AS1A8MUL3 147 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 M0QY20 66 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 FGF6P10767 208 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 LINC01587Q99440 93 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 KIR2DL4Q99706 377 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 ACANP16112 2415 aa10.94□□□□□ -0.66
CBX3-202ENST00000396386 M0R2P5 195 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 NSUN5P1Q3KNT7 163 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 MRPL35Q9NZE8 188 aaKnown RBP10.93□□□□□ -0.66
CBX3-202ENST00000396386 CYSLTR1Q9Y271 337 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 SORL1Q92673 2214 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 PLNP26678 52 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 CMC4P56277 68 aaPredicted RBP10.93□□□□□ -0.66
CBX3-202ENST00000396386 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 PIK3CD-AS1Q5SR53 167 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 MORN3Q6PF18 240 aaPredicted RBP10.93□□□□□ -0.66
CBX3-202ENST00000396386 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 PTH2Q96A98 100 aa10.93□□□□□ -0.66
CBX3-202ENST00000396386 A8MWV9 139 aa10.92□□□□□ -0.66
CBX3-202ENST00000396386 NMUP48645 174 aa10.92□□□□□ -0.66
CBX3-202ENST00000396386 TCTAP57738 103 aa10.92□□□□□ -0.66
CBX3-202ENST00000396386 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
CBX3-202ENST00000396386 F8VRH5 84 aa10.91□□□□□ -0.66
CBX3-202ENST00000396386 H7C1H1 209 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms