RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 MGPP08493 103 aa11.4□□□□□ -0.58
UBE2D3-207ENST00000394801 NEGR1Q7Z3B1 354 aa11.4□□□□□ -0.58
UBE2D3-207ENST00000394801 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
UBE2D3-207ENST00000394801 DUX5Q96PT3 197 aa11.4□□□□□ -0.58
UBE2D3-207ENST00000394801 A0A087WX48 190 aa11.39□□□□□ -0.59
UBE2D3-207ENST00000394801 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
UBE2D3-207ENST00000394801 IGHV3-16A0A0C4DH30 117 aa11.39□□□□□ -0.59
UBE2D3-207ENST00000394801 FOXI2Q6ZQN5 318 aa11.39□□□□□ -0.59
UBE2D3-207ENST00000394801 PCP2Q8IVA1 136 aa11.39□□□□□ -0.59
UBE2D3-207ENST00000394801 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-207ENST00000394801 TCTEX1D4Q5JR98 221 aa11.39□□□□□ -0.59
UBE2D3-207ENST00000394801 PLA2G2AP14555 144 aa11.38□□□□□ -0.59
UBE2D3-207ENST00000394801 NMUP48645 174 aa11.38□□□□□ -0.59
UBE2D3-207ENST00000394801 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
UBE2D3-207ENST00000394801 MRPL35Q9NZE8 188 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-207ENST00000394801 TMEM86BQ8N661 226 aa11.38□□□□□ -0.59
UBE2D3-207ENST00000394801 TRAV12-2A0A075B6T6 113 aa11.37□□□□□ -0.59
UBE2D3-207ENST00000394801 IGKV2D-26A0A0A0MRZ7 120 aa11.37□□□□□ -0.59
UBE2D3-207ENST00000394801 A0A1W2PPM0 123 aa11.37□□□□□ -0.59
UBE2D3-207ENST00000394801 TMEM238C9JI98 176 aa11.37□□□□□ -0.59
UBE2D3-207ENST00000394801 IGHV1OR15-1A0A075B7D0 117 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 IGKV3-20P01619 116 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 HLA-DRB4P13762 266 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 SLURP1P55000 103 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 RIPPLY3P57055 190 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 TCTAP57738 103 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 ZC2HC1BQ5TFG8 222 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 C18orf65Q6ZTR6 163 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 HLA-DRB4X5D2U9 266 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 ZNF469Q96JG9 3925 aaPredicted RBP11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 LINC01619G3V211 115 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 SPINK13Q1W4C9 94 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 Q8N1Y9 231 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 SCGB3A1Q96QR1 104 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 JPT2Q9H910 190 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 TMEM160Q9NX00 188 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
UBE2D3-207ENST00000394801 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 A8MTW9 85 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 PLNP26678 52 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 C4orf3Q8WVX3 66 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 MYO9AB2RTY4 2548 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 AGRNO00468 2067 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 H7C1H1 209 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 SUMO4Q6EEV6 95 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 C2orf66Q6UXQ4 117 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 TEX29Q8N6K0 151 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 NEXN-AS1Q8NBZ9 246 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 HIGD1BQ9P298 99 aa11.35□□□□□ -0.59
UBE2D3-207ENST00000394801 F8VRH5 84 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 OR11H1Q8NG94 326 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 NAA38Q9BRA0 125 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 ITPR3Q14573 2671 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 TRBV6-5A0A0K0K1A5 114 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 FABP2P12104 132 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 SYT8Q8NBV8 401 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 RAB37Q96AX2 223 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 PEMTQ9UBM1 199 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 SORL1Q92673 2214 aa11.34□□□□□ -0.59
UBE2D3-207ENST00000394801 LINC01549A6NIU2 74 aa11.33□□□□□ -0.6
UBE2D3-207ENST00000394801 A0A087WWL8 130 aa11.33□□□□□ -0.6
UBE2D3-207ENST00000394801 SMIM13P0DJ93 91 aa11.33□□□□□ -0.6
UBE2D3-207ENST00000394801 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
UBE2D3-207ENST00000394801 VCYO14598 125 aa11.32□□□□□ -0.6
UBE2D3-207ENST00000394801 CRYGDP07320 174 aa11.32□□□□□ -0.6
UBE2D3-207ENST00000394801 SAMD5Q5TGI4 173 aa11.32□□□□□ -0.6
UBE2D3-207ENST00000394801 WFDC11Q8NEX6 87 aa11.32□□□□□ -0.6
UBE2D3-207ENST00000394801 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 BAALCQ8WXS3 180 aa11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 CHTOPQ9Y3Y2 248 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 TRGV11A0A075B6L2 103 aa11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 F5H697 171 aa11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 H3BMM0 161 aa11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 DEFB131AP59861 70 aa11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 Q6ZSV7 163 aa11.31□□□□□ -0.6
UBE2D3-207ENST00000394801 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 CYSLTR1Q9Y271 337 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 TRBV25-1A0A075B6N4 114 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 M0QY20 66 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 TMEM61Q8N0U2 210 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
UBE2D3-207ENST00000394801 AKAP9Q99996 3911 aa11.29□□□□□ -0.6
UBE2D3-207ENST00000394801 J3QKU1 62 aa11.29□□□□□ -0.6
UBE2D3-207ENST00000394801 RBMY1A1P0DJD3 496 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-207ENST00000394801 RBMY1CP0DJD4 496 aa11.29□□□□□ -0.6
UBE2D3-207ENST00000394801 RBMY1FQ15415 496 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-207ENST00000394801 PRSS29PA6NIE9 313 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 IGIPA6NJ69 53 aa11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 MORN3Q6PF18 240 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-207ENST00000394801 GCSHP23434 173 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms