RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 JMJD1CQ15652 2540 aa0.39□□□□□ -2.35
RNU6-549P-201ENST00000384433 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 ADGRB1O14514 1584 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 J3QR89 54 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 SPCS2Q15005 226 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 C10orf82Q8WW14 230 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 PROK2Q9HC23 129 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 SAR1AQ9NR31 198 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 ANKRD17O75179 2603 aaKnown RBP0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 KIF13AQ9H1H9 1805 aa0.38□□□□□ -2.35
RNU6-549P-201ENST00000384433 ZNF142P52746 1687 aaPredicted RBP0.37□□□□□ -2.35
RNU6-549P-201ENST00000384433 SLC48A1Q6P1K1 146 aa0.37□□□□□ -2.35
RNU6-549P-201ENST00000384433 C4orf33Q8N1A6 199 aa0.37□□□□□ -2.35
RNU6-549P-201ENST00000384433 CACNA1EQ15878 2313 aa0.37□□□□□ -2.35
RNU6-549P-201ENST00000384433 MUC22E2RYF6 1773 aaPredicted RBP0.37□□□□□ -2.35
RNU6-549P-201ENST00000384433 MAP2P11137 1827 aaKnown RBP0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 GVQW2A0A096LPI5 108 aaPredicted RBP0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 NCR2O95944 276 aa0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 RPS25P62851 125 aaKnown RBP0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 SPANXN1Q5VSR9 72 aa0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 SPINK6Q6UWN8 80 aa0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 COX7B2Q8TF08 81 aa0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 PPP1R1CQ8WVI7 109 aa0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 Q96NJ1 140 aa0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 TPT1P8Q9HAU6 139 aa0.36□□□□□ -2.35
RNU6-549P-201ENST00000384433 KDM6BO15054 1643 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 ANK2Q01484 3957 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 RBAKDNA6NC62 111 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 F2Z2F3 143 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 COX4I1P13073 169 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 SMCO1Q147U7 214 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 TNCP24821 2201 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 PIEZO1Q92508 2521 aa0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 TNS1Q9HBL0 1735 aaKnown RBP0.35□□□□□ -2.35
RNU6-549P-201ENST00000384433 UBE2G1P62253 170 aa0.34□□□□□ -2.36
RNU6-549P-201ENST00000384433 SSBP1Q04837 148 aaKnown RBP0.34□□□□□ -2.36
RNU6-549P-201ENST00000384433 VMO1Q7Z5L0 202 aa0.34□□□□□ -2.36
RNU6-549P-201ENST00000384433 PSMG3Q9BT73 122 aaPredicted RBP0.34□□□□□ -2.36
RNU6-549P-201ENST00000384433 MED13LQ71F56 2210 aa0.34□□□□□ -2.36
RNU6-549P-201ENST00000384433 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
RNU6-549P-201ENST00000384433 C9orf116Q5BN46 136 aaPredicted RBP0.33□□□□□ -2.36
RNU6-549P-201ENST00000384433 SDF2Q99470 211 aa0.33□□□□□ -2.36
RNU6-549P-201ENST00000384433 PRR15LQ9BU68 103 aa0.33□□□□□ -2.36
RNU6-549P-201ENST00000384433 BPESC1Q9GZL8 116 aa0.33□□□□□ -2.36
RNU6-549P-201ENST00000384433 VIRMAQ69YN4 1812 aaKnown RBP0.33□□□□□ -2.36
RNU6-549P-201ENST00000384433 TTC28Q96AY4 2481 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 SSC5DA1L4H1 1573 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 SOGA1O94964 1423 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 IL5P05113 134 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 COPZ1P61923 177 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 RRAS2P62070 204 aaPredicted RBP0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 S100A7L2Q5SY68 101 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 TMEM242Q9NWH2 141 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 MYH13Q9UKX3 1938 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 F5P12259 2224 aa0.32□□□□□ -2.36
RNU6-549P-201ENST00000384433 TRBV7-1A0A0A6YYK4 115 aa0.31□□□□□ -2.36
RNU6-549P-201ENST00000384433 CLPSL1A2RUU4 121 aa0.31□□□□□ -2.36
RNU6-549P-201ENST00000384433 CDK13Q14004 1512 aaKnown RBP0.31□□□□□ -2.36
RNU6-549P-201ENST00000384433 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
RNU6-549P-201ENST00000384433 BICRAQ9NZM4 1560 aa0.31□□□□□ -2.36
RNU6-549P-201ENST00000384433 TMEM2Q9UHN6 1383 aa0.31□□□□□ -2.36
RNU6-549P-201ENST00000384433 CACNA1HO95180 2353 aa0.3□□□□□ -2.36
RNU6-549P-201ENST00000384433 UBE2D1P51668 147 aa0.3□□□□□ -2.36
RNU6-549P-201ENST00000384433 RPRMQ9NS64 109 aa0.3□□□□□ -2.36
RNU6-549P-201ENST00000384433 V9GYV3 84 aa0.3□□□□□ -2.36
RNU6-549P-201ENST00000384433 TRGV1A0A0A0MS02 117 aa0.29□□□□□ -2.36
RNU6-549P-201ENST00000384433 MCRIP1C9JLW8 97 aa0.29□□□□□ -2.36
RNU6-549P-201ENST00000384433 FAM74A4Q5TZK3 123 aa0.29□□□□□ -2.36
RNU6-549P-201ENST00000384433 RPL7L1Q6DKI1 246 aaKnown RBP0.29□□□□□ -2.36
RNU6-549P-201ENST00000384433 SPTSSBQ8NFR3 76 aa0.29□□□□□ -2.36
RNU6-549P-201ENST00000384433 SMIM11BQ8TCY0 68 aa0.29□□□□□ -2.36
RNU6-549P-201ENST00000384433 NRXN2Q9P2S2 1712 aa0.28□□□□□ -2.36
RNU6-549P-201ENST00000384433 ACYP2P14621 99 aa0.28□□□□□ -2.36
RNU6-549P-201ENST00000384433 SPTSSAQ969W0 71 aa0.28□□□□□ -2.36
RNU6-549P-201ENST00000384433 PFDN5Q99471 154 aa0.28□□□□□ -2.36
RNU6-549P-201ENST00000384433 PHIPQ8WWQ0 1821 aa0.28□□□□□ -2.36
RNU6-549P-201ENST00000384433 PLXNA1Q9UIW2 1896 aa0.28□□□□□ -2.36
RNU6-549P-201ENST00000384433 IBTKQ9P2D0 1353 aaPredicted RBP0.28□□□□□ -2.36
RNU6-549P-201ENST00000384433 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
RNU6-549P-201ENST00000384433 EDDM3BP56851 147 aa0.27□□□□□ -2.37
RNU6-549P-201ENST00000384433 LAMB1P07942 1786 aa0.27□□□□□ -2.37
RNU6-549P-201ENST00000384433 NMBP08949 121 aa0.26□□□□□ -2.37
RNU6-549P-201ENST00000384433 SCIMPQ6UWF3 145 aa0.26□□□□□ -2.37
RNU6-549P-201ENST00000384433 KCNRGQ8N5I3 272 aa0.26□□□□□ -2.37
RNU6-549P-201ENST00000384433 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
RNU6-549P-201ENST00000384433 MYH6P13533 1939 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 MYOM3Q5VTT5 1437 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 A6NIN4 97 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 SNCGO76070 127 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 PIPP12273 146 aaPredicted RBP0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 Q6ZRX8 168 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 DPH3Q96FX2 82 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 TMEM191AQ9H0A3 160 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 AKAP11Q9UKA4 1901 aa0.25□□□□□ -2.37
RNU6-549P-201ENST00000384433 POLQO75417 2590 aa0.24□□□□□ -2.37
RNU6-549P-201ENST00000384433 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
RNU6-549P-201ENST00000384433 NDUFB6O95139 128 aa0.24□□□□□ -2.37
RNU6-549P-201ENST00000384433 GUCA1AP43080 201 aaPredicted RBP0.24□□□□□ -2.37
RNU6-549P-201ENST00000384433 ABCA12Q86UK0 2595 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms