RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 NACAE9PAV3 2078 aa10.84□□□□□ -0.67
PDGFB-202ENST00000381551 TRAV26-1A0A087WT03 109 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 CRYBA4P53673 196 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 NUP35Q8NFH5 326 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 VSIG2Q96IQ7 327 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 NAT8BQ9UHF3 227 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 PRO0255Q9UI72 69 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 KIF25-AS1Q9Y6Z4 181 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 TENM2Q9NT68 2774 aa10.83□□□□□ -0.68
PDGFB-202ENST00000381551 A0A087WWL8 130 aa10.82□□□□□ -0.68
PDGFB-202ENST00000381551 TCTAP57738 103 aa10.82□□□□□ -0.68
PDGFB-202ENST00000381551 TWIST1Q15672 202 aa10.82□□□□□ -0.68
PDGFB-202ENST00000381551 Q6ZSN1 163 aa10.82□□□□□ -0.68
PDGFB-202ENST00000381551 C14orf178Q8N769 122 aaPredicted RBP10.82□□□□□ -0.68
PDGFB-202ENST00000381551 APLNQ9ULZ1 77 aa10.82□□□□□ -0.68
PDGFB-202ENST00000381551 A0A0J9YY99 117 aa10.81□□□□□ -0.68
PDGFB-202ENST00000381551 H3BNG1 76 aa10.81□□□□□ -0.68
PDGFB-202ENST00000381551 GATA1P15976 413 aaPredicted RBP10.81□□□□□ -0.68
PDGFB-202ENST00000381551 FAM74A4Q5TZK3 123 aa10.81□□□□□ -0.68
PDGFB-202ENST00000381551 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 RHODO00212 210 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 PAX4O43316 350 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 APOC3P02656 99 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 EVI2AP22794 236 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 LINC00315P59091 139 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 CLRN3Q8NCR9 226 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 BORCS7Q96B45 105 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 AP1S3Q96PC3 154 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 CTDSP1Q9GZU7 261 aa10.8□□□□□ -0.68
PDGFB-202ENST00000381551 TRBV6-4A0A1B0GX49 114 aa10.79□□□□□ -0.68
PDGFB-202ENST00000381551 C7orf77A4D0Y5 90 aa10.79□□□□□ -0.68
PDGFB-202ENST00000381551 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
PDGFB-202ENST00000381551 SMIM17P0DL12 118 aa10.78□□□□□ -0.68
PDGFB-202ENST00000381551 C15orf53Q8NAA6 179 aa10.78□□□□□ -0.68
PDGFB-202ENST00000381551 TMEM242Q9NWH2 141 aa10.78□□□□□ -0.68
PDGFB-202ENST00000381551 FAM3BP58499 235 aaPredicted RBP10.77□□□□□ -0.69
PDGFB-202ENST00000381551 RAB4BP61018 213 aa10.77□□□□□ -0.69
PDGFB-202ENST00000381551 RIGQ13278 110 aa10.77□□□□□ -0.69
PDGFB-202ENST00000381551 SVBPQ8N300 66 aa10.77□□□□□ -0.69
PDGFB-202ENST00000381551 IMMP2LQ96T52 175 aa10.77□□□□□ -0.69
PDGFB-202ENST00000381551 A0A087WWC5 75 aa10.76□□□□□ -0.69
PDGFB-202ENST00000381551 A0A096LPF7 62 aa10.76□□□□□ -0.69
PDGFB-202ENST00000381551 NUDT3O95989 172 aa10.76□□□□□ -0.69
PDGFB-202ENST00000381551 RHEBQ15382 184 aa10.76□□□□□ -0.69
PDGFB-202ENST00000381551 DPH3P1Q9H4G8 78 aa10.76□□□□□ -0.69
PDGFB-202ENST00000381551 LOC100131303A0A0U1RQF7 123 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 F5H697 171 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 K7EQD1 137 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 SNAPINO95295 136 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 GYPEP15421 78 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 RHOHQ15669 191 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 SMIM15Q7Z3B0 74 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 PRADC1Q9BSG0 188 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 RPS10P5Q9NQ39 176 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 Q9UF83 564 aa10.75□□□□□ -0.69
PDGFB-202ENST00000381551 ZNF56Q15929 161 aa10.74□□□□□ -0.69
PDGFB-202ENST00000381551 MRPL23Q16540 153 aaKnown RBP10.74□□□□□ -0.69
PDGFB-202ENST00000381551 TMEM191AQ9H0A3 160 aa10.74□□□□□ -0.69
PDGFB-202ENST00000381551 ICOSQ9Y6W8 199 aa10.74□□□□□ -0.69
PDGFB-202ENST00000381551 VPS13DQ5THJ4 4388 aa10.74□□□□□ -0.69
PDGFB-202ENST00000381551 KMT2CQ8NEZ4 4911 aaKnown RBP10.74□□□□□ -0.69
PDGFB-202ENST00000381551 DNAH1Q9P2D7 4330 aa10.73□□□□□ -0.69
PDGFB-202ENST00000381551 A0A1B0GW15 77 aa10.73□□□□□ -0.69
PDGFB-202ENST00000381551 CAMPP49913 170 aa10.73□□□□□ -0.69
PDGFB-202ENST00000381551 MRPL54Q6P161 138 aaKnown RBP10.73□□□□□ -0.69
PDGFB-202ENST00000381551 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 M0QY20 66 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 MGPP08493 103 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 P0DMU3 169 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 FAM231AP0DMU4 169 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 FAM231CP0DMU5 169 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
PDGFB-202ENST00000381551 SRIP30626 198 aa10.71□□□□□ -0.69
PDGFB-202ENST00000381551 ESRGQ1W209 222 aa10.71□□□□□ -0.69
PDGFB-202ENST00000381551 KCNIP4Q6PIL6 250 aa10.71□□□□□ -0.69
PDGFB-202ENST00000381551 NEGR1Q7Z3B1 354 aa10.71□□□□□ -0.69
PDGFB-202ENST00000381551 ATP5L2Q7Z4Y8 100 aa10.71□□□□□ -0.69
PDGFB-202ENST00000381551 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
PDGFB-202ENST00000381551 LYSTQ99698 3801 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 SACSQ9NZJ4 4579 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 S100A8P05109 93 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 RAB4AP20338 218 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 HBBP68871 147 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 GAGE1Q13065 139 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 GAGE4Q13068 117 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 GAGE5Q13069 117 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 LGALS9CQ6DKI2 356 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 ATRAIDQ6UW56 229 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 RNF185Q96GF1 192 aa10.7□□□□□ -0.7
PDGFB-202ENST00000381551 ALMS1Q8TCU4 4167 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 TRAV9-1A0A075B6T8 112 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 H7C1H1 209 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
PDGFB-202ENST00000381551 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms