RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 GGTLC3B5MD39 225 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 PSCAO43653 123 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 IGLV2-11P01706 119 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 LELP1Q5T871 98 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 SVBPQ8N300 66 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 SLC25A29Q8N8R3 303 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 FAM213BQ8TBF2 198 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 SEC11CQ9BY50 192 aa8.77□□□□□ -1.01
RPAIN-202ENST00000381208 LOC100131303A0A0U1RQF7 123 aa8.76□□□□□ -1.01
RPAIN-202ENST00000381208 CTXND1A0A1B0GTU2 59 aa8.76□□□□□ -1.01
RPAIN-202ENST00000381208 A8MWV9 139 aa8.76□□□□□ -1.01
RPAIN-202ENST00000381208 EPM2AB3EWF7 344 aa8.76□□□□□ -1.01
RPAIN-202ENST00000381208 S100A4P26447 101 aaKnown RBP8.76□□□□□ -1.01
RPAIN-202ENST00000381208 ZNF80P51504 273 aaPredicted RBP8.76□□□□□ -1.01
RPAIN-202ENST00000381208 OR10J3Q5JRS4 329 aa8.76□□□□□ -1.01
RPAIN-202ENST00000381208 ZFP2Q6ZN57 461 aa8.76□□□□□ -1.01
RPAIN-202ENST00000381208 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
RPAIN-202ENST00000381208 C11orf21Q9P2W6 132 aa8.76□□□□□ -1.01
RPAIN-202ENST00000381208 FABP5P3A8MUU1 101 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 IBA57-AS1B1ANH7 110 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 F8W036 122 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 APOC3P02656 99 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 C21orf62-AS1Q17RA5 79 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 ZNF506Q5JVG8 444 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 C10orf91Q5T1B1 145 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 HIST1H2BAQ96A08 127 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 GTSF1LQ9H1H1 148 aa8.75□□□□□ -1.01
RPAIN-202ENST00000381208 CARHSP1Q9Y2V2 147 aaKnown RBP8.75□□□□□ -1.01
RPAIN-202ENST00000381208 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
RPAIN-202ENST00000381208 RNASE3P12724 160 aaKnown RBP8.74□□□□□ -1.01
RPAIN-202ENST00000381208 LAGE3Q14657 143 aa8.74□□□□□ -1.01
RPAIN-202ENST00000381208 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
RPAIN-202ENST00000381208 ATP6V0E2Q8NHE4 81 aa8.74□□□□□ -1.01
RPAIN-202ENST00000381208 MAP1LC3B2A6NCE7 125 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 PGPEP1LA6NFU8 196 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 SNAPINO95295 136 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 GCSHP23434 173 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 ASIPP42127 132 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 TCEAL7Q9BRU2 100 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 TM2D2Q9BX73 214 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 MAP1LC3BQ9GZQ8 125 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 EIF5A2Q9GZV4 153 aaKnown RBP8.73□□□□□ -1.01
RPAIN-202ENST00000381208 IL36BQ9NZH7 164 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 A0A087WWC5 75 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 IGHV3-73A0A0B4J1V6 119 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 RHODO00212 210 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 PEX7O00628 323 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 TAGLN2P37802 199 aaKnown RBP8.73□□□□□ -1.01
RPAIN-202ENST00000381208 FHITP49789 147 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 FGF8P55075 233 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-202ENST00000381208 SYT8Q8NBV8 401 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 MBD3L1Q8WWY6 194 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 FRZBQ92765 325 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 PARLQ9H300 379 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 ARL2-SNX15V9GYD0 113 aa8.73□□□□□ -1.01
RPAIN-202ENST00000381208 IGKV3D-20A0A0C4DH25 116 aa8.72□□□□□ -1.01
RPAIN-202ENST00000381208 IFNA1P01562 189 aa8.72□□□□□ -1.01
RPAIN-202ENST00000381208 XGP55808 180 aa8.72□□□□□ -1.01
RPAIN-202ENST00000381208 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
RPAIN-202ENST00000381208 COX8CQ7Z4L0 72 aa8.72□□□□□ -1.01
RPAIN-202ENST00000381208 SFT2D1Q8WV19 159 aa8.72□□□□□ -1.01
RPAIN-202ENST00000381208 IGLV5-52A0A0A0MRZ9 124 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 TRAV34A0A0B4J273 112 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 LRCOL1A6NCL2 159 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 RBFOX3A6NFN3 312 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 FAM74A7A6NL05 159 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 B4DEV8 164 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 KRTAP10-1P60331 282 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 SRSF3P84103 164 aaKnown RBP8.71□□□□□ -1.02
RPAIN-202ENST00000381208 Q86TA4 180 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 FMC1Q96HJ9 113 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 LINC00479Q96M42 142 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 TMEM70Q9BUB7 260 aa8.71□□□□□ -1.02
RPAIN-202ENST00000381208 A0A1B0GV50 99 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 NDUFS6O75380 124 aaKnown RBP8.7□□□□□ -1.02
RPAIN-202ENST00000381208 ADCYAP1P18509 176 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 UBE2G2P60604 165 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 UBE2G1P62253 170 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 FAM162BQ5T6X4 162 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 KRTAP4-11Q9BYQ6 195 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 Q9HAA7 133 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 COX11Q9Y6N1 276 aa8.7□□□□□ -1.02
RPAIN-202ENST00000381208 TRBV6-1A0A0K0K1D8 114 aa8.69□□□□□ -1.02
RPAIN-202ENST00000381208 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
RPAIN-202ENST00000381208 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
RPAIN-202ENST00000381208 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
RPAIN-202ENST00000381208 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
RPAIN-202ENST00000381208 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
RPAIN-202ENST00000381208 Q8N814 137 aa8.69□□□□□ -1.02
RPAIN-202ENST00000381208 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 SCO1O75880 301 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 GAGE1Q13065 139 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 GAGE4Q13068 117 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 GAGE5Q13069 117 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
RPAIN-202ENST00000381208 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms