RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 KALRNO60229 2985 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 SNCGO76070 127 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 Q6YL49 198 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 LINC01559Q495D7 138 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 WIPF2Q8TF74 440 aaPredicted RBP10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 CRXO43186 299 aaPredicted RBP10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 CFHR3Q02985 330 aa10.87□□□□□ -0.67
SHROOM1-203ENST00000378679 C10orf99Q6UWK7 81 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 PRADC1Q9BSG0 188 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 SDHAF1A6NFY7 115 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 H3BMG7 143 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 H3BRM9 83 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 C1orf159Q96HA4 380 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 DKK2Q9UBU2 259 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 NEGR1Q7Z3B1 354 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 CHAC1Q9BUX1 264 aa10.86□□□□□ -0.67
SHROOM1-203ENST00000378679 RHODO00212 210 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 TAX1BP3O14907 124 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 TACC2O95359 2948 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 TRPT1Q86TN4 253 aaKnown RBP10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 TEX48A0A1B0GUV7 120 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 C2orf66Q6UXQ4 117 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 LINC00322Q6ZN03 302 aaPredicted RBP10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 SH2D6Q7Z4S9 175 aa10.85□□□□□ -0.67
SHROOM1-203ENST00000378679 ZNF815PA8K554 130 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 IGLV2-8P01709 118 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 AZU1P20160 251 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 Q6ZS46 218 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 Q8N8P6 123 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 A8MWV9 139 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 GAGE7O76087 117 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 GAGE12FP0CL80 117 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 GAGE12GP0CL81 117 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 GAGE12IP0CL82 117 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 COX8AP10176 69 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 DEFB121Q5J5C9 76 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 C9orf47Q6ZRZ4 202 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 SVIPQ8NHG7 77 aa10.84□□□□□ -0.67
SHROOM1-203ENST00000378679 C9orf118A6NHY6 69 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 AKAP13Q12802 2813 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 ZZEF1O43149 2961 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 TMEM86BQ8N661 226 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 SMIM2Q9BVW6 85 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 RBX1P62877 108 aa10.83□□□□□ -0.68
SHROOM1-203ENST00000378679 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
SHROOM1-203ENST00000378679 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
SHROOM1-203ENST00000378679 A0A087WX48 190 aa10.82□□□□□ -0.68
SHROOM1-203ENST00000378679 C19orf71A6NCJ1 209 aa10.82□□□□□ -0.68
SHROOM1-203ENST00000378679 ZFAND3Q9H8U3 227 aa10.82□□□□□ -0.68
SHROOM1-203ENST00000378679 DLX4Q92988 240 aaPredicted RBP10.82□□□□□ -0.68
SHROOM1-203ENST00000378679 TP53TG1Q9Y2A0 90 aa10.82□□□□□ -0.68
SHROOM1-203ENST00000378679 COL12A1Q99715 3063 aa10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 GAGE12JA6NER3 117 aa10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 COX6CP09669 75 aa10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 NPC2P61916 151 aa10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 GAGE4Q13068 117 aa10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 GAGE5Q13069 117 aa10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 MLST8Q9BVC4 326 aa10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 RAI1Q7Z5J4 1906 aaPredicted RBP10.81□□□□□ -0.68
SHROOM1-203ENST00000378679 CLPSL1A2RUU4 121 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 K7EP34 96 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 PLA2G2AP14555 144 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 ZNF80P51504 273 aaPredicted RBP10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 PLNP26678 52 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 A0A1W2PPM0 123 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 LINC00310P59036 64 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 ZNF747Q9BV97 191 aa10.8□□□□□ -0.68
SHROOM1-203ENST00000378679 TRAV2A0A0B4J234 112 aa10.79□□□□□ -0.68
SHROOM1-203ENST00000378679 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
SHROOM1-203ENST00000378679 ZNRF2Q8NHG8 242 aa10.79□□□□□ -0.68
SHROOM1-203ENST00000378679 Q6ZSV7 163 aa10.79□□□□□ -0.68
SHROOM1-203ENST00000378679 TRAV13-1A0A0B4J241 112 aa10.79□□□□□ -0.68
SHROOM1-203ENST00000378679 TRBV6-1A0A0K0K1D8 114 aa10.79□□□□□ -0.68
SHROOM1-203ENST00000378679 C4orf3Q8WVX3 66 aa10.79□□□□□ -0.68
SHROOM1-203ENST00000378679 SPXQ9BT56 116 aa10.78□□□□□ -0.68
SHROOM1-203ENST00000378679 VWC2LB2RUY7 222 aa10.77□□□□□ -0.68
SHROOM1-203ENST00000378679 M0R2P5 195 aa10.77□□□□□ -0.68
SHROOM1-203ENST00000378679 KLF5Q13887 457 aaPredicted RBP10.77□□□□□ -0.68
SHROOM1-203ENST00000378679 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.68
SHROOM1-203ENST00000378679 Q8N1Y9 231 aa10.77□□□□□ -0.68
SHROOM1-203ENST00000378679 U3KQE9 123 aa10.77□□□□□ -0.68
SHROOM1-203ENST00000378679 A0A0J9YX75 114 aa10.77□□□□□ -0.69
SHROOM1-203ENST00000378679 I3L3M4 83 aa10.77□□□□□ -0.69
SHROOM1-203ENST00000378679 MRPL35Q9NZE8 188 aaKnown RBP10.77□□□□□ -0.69
SHROOM1-203ENST00000378679 C20orf78Q9BR46 151 aa10.77□□□□□ -0.69
SHROOM1-203ENST00000378679 SMAD5-AS1Q9Y6J3 95 aa10.77□□□□□ -0.69
SHROOM1-203ENST00000378679 GAGE12HA6NDE8 117 aa10.76□□□□□ -0.69
SHROOM1-203ENST00000378679 MYCNOSP40205 109 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms