RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 RPRMLQ8N4K4 120 aa6.71□□□□□ -1.34
UBR4-201ENST00000375218 BLCAPP62952 87 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 CLEC2BQ92478 149 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 PTPRQQ9UMZ3 2332 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 TRBV7-7A0A0K0K1E9 115 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 PRM2P04554 102 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 ZNF20P17024 532 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 SPINK2P20155 84 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 MDP1Q86V88 176 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 HS3ST6Q96QI5 342 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 CACNA1BQ00975 2339 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 TMEM14AQ9Y6G1 99 aa6.7□□□□□ -1.34
UBR4-201ENST00000375218 TRAV17A0A0B4J275 112 aa6.69□□□□□ -1.34
UBR4-201ENST00000375218 C1orf100Q5SVJ3 147 aa6.69□□□□□ -1.34
UBR4-201ENST00000375218 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
UBR4-201ENST00000375218 DSCAMO60469 2012 aa6.69□□□□□ -1.34
UBR4-201ENST00000375218 MSMPQ1L6U9 139 aa6.69□□□□□ -1.34
UBR4-201ENST00000375218 LTAP01374 205 aa6.69□□□□□ -1.34
UBR4-201ENST00000375218 CCL8P80075 99 aa6.69□□□□□ -1.34
UBR4-201ENST00000375218 CKS2P33552 79 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 PPP1R1CQ8WVI7 109 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 TRGV8A0A0C4DH27 118 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 SBSPONQ8IVN8 264 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
UBR4-201ENST00000375218 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 SLC25A16P16260 332 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 POM121L12Q8N7R1 296 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
UBR4-201ENST00000375218 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 ABRACLQ9P1F3 81 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 LYSTQ99698 3801 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 SLC25A2Q9BXI2 301 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 NHP2Q9NX24 153 aaKnown RBP6.67□□□□□ -1.34
UBR4-201ENST00000375218 TMEM272A0A1B0GTI8 110 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 NRACQ8N912 160 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 DEFB124Q8NES8 71 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 ODF3Q96PU9 254 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 SCRT2Q9NQ03 307 aa6.67□□□□□ -1.34
UBR4-201ENST00000375218 OR5AS1Q8N127 324 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 OPRPNQ99935 248 aaPredicted RBP6.66□□□□□ -1.34
UBR4-201ENST00000375218 ZNF492Q9P255 531 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 FRMD6-AS1P0C7T7 363 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 UBE2AP49459 152 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 Q8N2B8 174 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 MPV17P39210 176 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 PATE4P0C8F1 98 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 SLC50A1Q9BRV3 221 aa6.66□□□□□ -1.34
UBR4-201ENST00000375218 SVILO95425 2214 aa6.65□□□□□ -1.34
UBR4-201ENST00000375218 EFNA4P52798 201 aa6.65□□□□□ -1.34
UBR4-201ENST00000375218 PRAC1Q96KF2 57 aa6.65□□□□□ -1.34
UBR4-201ENST00000375218 DEFB126Q9BYW3 111 aa6.65□□□□□ -1.34
UBR4-201ENST00000375218 COX8AP10176 69 aa6.65□□□□□ -1.35
UBR4-201ENST00000375218 C2orf91Q6ZV80 131 aa6.65□□□□□ -1.35
UBR4-201ENST00000375218 FDCSPQ8NFU4 85 aa6.65□□□□□ -1.35
UBR4-201ENST00000375218 KLK13Q9UKR3 277 aa6.65□□□□□ -1.35
UBR4-201ENST00000375218 ABCA2Q9BZC7 2435 aa6.65□□□□□ -1.35
UBR4-201ENST00000375218 GNLYP22749 145 aa6.64□□□□□ -1.35
UBR4-201ENST00000375218 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
UBR4-201ENST00000375218 FAM19A2Q8N3H0 131 aa6.64□□□□□ -1.35
UBR4-201ENST00000375218 SCRT1Q9BWW7 348 aa6.64□□□□□ -1.35
UBR4-201ENST00000375218 CCKP06307 115 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 DSCR4P56555 118 aaPredicted RBP6.63□□□□□ -1.35
UBR4-201ENST00000375218 PHF5AQ7RTV0 110 aaKnown RBP6.63□□□□□ -1.35
UBR4-201ENST00000375218 HIST1H4GQ99525 98 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 TEX15Q9BXT5 2789 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 ZFYVE26Q68DK2 2539 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 AQP3Q92482 292 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 TP53TG3Q9ULZ0 132 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 IGLV2-8P01709 118 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 MRPS36P82909 103 aaKnown RBP6.63□□□□□ -1.35
UBR4-201ENST00000375218 CCL28Q9NRJ3 127 aa6.63□□□□□ -1.35
UBR4-201ENST00000375218 LEPROTO15243 131 aa6.62□□□□□ -1.35
UBR4-201ENST00000375218 CYP2G1PQ6ZSU1 146 aa6.62□□□□□ -1.35
UBR4-201ENST00000375218 IGHV1-2P23083 117 aa6.62□□□□□ -1.35
UBR4-201ENST00000375218 LINC00310P59036 64 aa6.62□□□□□ -1.35
UBR4-201ENST00000375218 C11orf52Q96A22 123 aa6.62□□□□□ -1.35
UBR4-201ENST00000375218 TTTY12Q9BZ98 90 aa6.62□□□□□ -1.35
UBR4-201ENST00000375218 CD28P10747 220 aa6.61□□□□□ -1.35
UBR4-201ENST00000375218 TET2Q6N021 2002 aaPredicted RBP6.61□□□□□ -1.35
UBR4-201ENST00000375218 KLF9Q13886 244 aaPredicted RBP6.61□□□□□ -1.35
UBR4-201ENST00000375218 FBXL19-AS1Q494R0 122 aa6.61□□□□□ -1.35
UBR4-201ENST00000375218 DIRC1Q969H9 104 aa6.61□□□□□ -1.35
UBR4-201ENST00000375218 A0A1W2PS18 150 aa6.61□□□□□ -1.35
UBR4-201ENST00000375218 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
UBR4-201ENST00000375218 Q8N8P6 123 aa6.61□□□□□ -1.35
UBR4-201ENST00000375218 ZNF580Q9UK33 172 aa6.61□□□□□ -1.35
UBR4-201ENST00000375218 TPRP12270 2363 aaKnown RBP6.61□□□□□ -1.35
UBR4-201ENST00000375218 CXCL6P80162 114 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 C2orf83Q53S99 150 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 C10orf128Q5T292 105 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 CADP27708 2225 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 VWFP04275 2813 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 FGF12P61328 243 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 ZGRF1Q86YA3 2104 aa6.6□□□□□ -1.35
UBR4-201ENST00000375218 FAM223AQ8IWN6 122 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms