RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TPPP3Q9BW30 176 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 SEC11CQ9BY50 192 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 SAMD10Q9BYL1 202 aa7.94□□□□□ -1.14
HSPG2-202ENST00000374676 A0A0J9YY99 117 aa7.93□□□□□ -1.14
HSPG2-202ENST00000374676 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
HSPG2-202ENST00000374676 ADCYAP1P18509 176 aa7.93□□□□□ -1.14
HSPG2-202ENST00000374676 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
HSPG2-202ENST00000374676 PPP1R2P9O14990 202 aa7.92□□□□□ -1.14
HSPG2-202ENST00000374676 NTF3P20783 257 aa7.92□□□□□ -1.14
HSPG2-202ENST00000374676 MSRB1Q9NZV6 116 aa7.92□□□□□ -1.14
HSPG2-202ENST00000374676 KIF25-AS1Q9Y6Z4 181 aa7.92□□□□□ -1.14
HSPG2-202ENST00000374676 SACSQ9NZJ4 4579 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 KMT2CQ8NEZ4 4911 aaKnown RBP7.91□□□□□ -1.14
HSPG2-202ENST00000374676 A0A087WWL8 130 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 IGHV3-73A0A0B4J1V6 119 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 HIGD1CA8MV81 97 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 NUDT3O95989 172 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 MT-ND4LP03901 98 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 TRGC1P0CF51 173 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 SSTP61278 116 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 MRPL23Q16540 153 aaKnown RBP7.91□□□□□ -1.14
HSPG2-202ENST00000374676 RNF212Q495C1 297 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 FAM74A4Q5TZK3 123 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 LGALS9CQ6DKI2 356 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 C14orf178Q8N769 122 aaPredicted RBP7.91□□□□□ -1.14
HSPG2-202ENST00000374676 SLC25A29Q8N8R3 303 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 PGLYRP4Q96LB8 373 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 AP1S3Q96PC3 154 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 NAT8BQ9UHF3 227 aa7.91□□□□□ -1.14
HSPG2-202ENST00000374676 A0A096LPF7 62 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 A0A1B0GUT8 65 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 SMIM17P0DL12 118 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 P0DMU3 169 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 FAM231AP0DMU4 169 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 FAM231CP0DMU5 169 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 GYPEP15421 78 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 LINC00315P59091 139 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 RAB4BP61018 213 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 RHOHQ15669 191 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 TWIST1Q15672 202 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 Q6ZSN1 163 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 NUP35Q8NFH5 326 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 LINC00476Q8WZB0 136 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 BORCS7Q96B45 105 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 PRADC1Q9BSG0 188 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 CARHSP1Q9Y2V2 147 aaKnown RBP7.9□□□□□ -1.14
HSPG2-202ENST00000374676 ICOSQ9Y6W8 199 aa7.9□□□□□ -1.14
HSPG2-202ENST00000374676 LCE6AA0A183 80 aa7.89□□□□□ -1.15
HSPG2-202ENST00000374676 K7EQD1 137 aa7.89□□□□□ -1.15
HSPG2-202ENST00000374676 DPH3P1Q9H4G8 78 aa7.89□□□□□ -1.15
HSPG2-202ENST00000374676 TRBV10-1A0A0K0K1A3 114 aa7.88□□□□□ -1.15
HSPG2-202ENST00000374676 EVI2AP22794 236 aa7.88□□□□□ -1.15
HSPG2-202ENST00000374676 RIGQ13278 110 aa7.88□□□□□ -1.15
HSPG2-202ENST00000374676 SH2D6Q7Z4S9 175 aa7.88□□□□□ -1.15
HSPG2-202ENST00000374676 CTDSP1Q9GZU7 261 aa7.88□□□□□ -1.15
HSPG2-202ENST00000374676 LOC100131303A0A0U1RQF7 123 aa7.87□□□□□ -1.15
HSPG2-202ENST00000374676 SRIP30626 198 aa7.87□□□□□ -1.15
HSPG2-202ENST00000374676 CCL18P55774 89 aa7.87□□□□□ -1.15
HSPG2-202ENST00000374676 ZNF56Q15929 161 aa7.87□□□□□ -1.15
HSPG2-202ENST00000374676 SMIM15Q7Z3B0 74 aa7.87□□□□□ -1.15
HSPG2-202ENST00000374676 NEGR1Q7Z3B1 354 aa7.87□□□□□ -1.15
HSPG2-202ENST00000374676 DNAH6Q9C0G6 4158 aa7.87□□□□□ -1.15
HSPG2-202ENST00000374676 A0A1B0GW15 77 aa7.86□□□□□ -1.15
HSPG2-202ENST00000374676 F5H697 171 aa7.86□□□□□ -1.15
HSPG2-202ENST00000374676 LY6G6CO95867 125 aa7.86□□□□□ -1.15
HSPG2-202ENST00000374676 FAM3BP58499 235 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-202ENST00000374676 NDUFA5Q16718 116 aa7.86□□□□□ -1.15
HSPG2-202ENST00000374676 ESRGQ1W209 222 aa7.86□□□□□ -1.15
HSPG2-202ENST00000374676 IMMP2LQ96T52 175 aa7.86□□□□□ -1.15
HSPG2-202ENST00000374676 TMEM191AQ9H0A3 160 aa7.86□□□□□ -1.15
HSPG2-202ENST00000374676 H7C1H1 209 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 LINC00694P0DN24 101 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 TIRAPP58753 221 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 LYPD5Q6UWN5 251 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 UBE2DNLQ8IWF7 75 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 CLRN3Q8NCR9 226 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 FRZBQ92765 325 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 TMEM242Q9NWH2 141 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 Q9UF83 564 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 LINC00588Q9Y4M8 146 aa7.85□□□□□ -1.15
HSPG2-202ENST00000374676 KMT2AQ03164 3969 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 A0A087WWC5 75 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 C7orf77A4D0Y5 90 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 GAGE12JA6NER3 117 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 M0QY20 66 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 APOC3P02656 99 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 MGPP08493 103 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 RPL36AP83881 106 aaKnown RBP7.84□□□□□ -1.15
HSPG2-202ENST00000374676 GAGE1Q13065 139 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 GAGE4Q13068 117 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 GAGE5Q13069 117 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 RHEBQ15382 184 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 GAGE13Q4V321 117 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 SUMO4Q6EEV6 95 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 ATP5L2Q7Z4Y8 100 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 SLC7A5P1Q8MH63 180 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 ATP6V0E2Q8NHE4 81 aa7.84□□□□□ -1.15
HSPG2-202ENST00000374676 ZNRF2Q8NHG8 242 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms