RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 IGF2RP11717 2491 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 NCOR2Q9Y618 2525 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 H3BMM0 161 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 APOC4P55056 127 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 UBE2WQ96B02 151 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 TIMM8BQ9Y5J9 83 aaPredicted RBP6.29□□□□□ -1.4
GARNL3-201ENST00000373386 CHD8Q9HCK8 2581 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 H3BRN7 92 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 ZNF138P52744 262 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
GARNL3-201ENST00000373386 URB1O60287 2271 aaKnown RBP6.29□□□□□ -1.4
GARNL3-201ENST00000373386 KNCNA6PVL3 124 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 ODF3BA8MYP8 253 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 OVOL3O00110 214 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 CACNG7P62955 275 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 C17orf77Q96MU5 243 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 NAV3Q8IVL0 2385 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 CADP27708 2225 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 IGHV3-21A0A0B4J1V1 117 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 WI2-2373I1.2A0A1W2PRP0 233 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 K7EMI3 77 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 ARMS2P0C7Q2 107 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 FCER1GP30273 86 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 OR8A1Q8NGG7 326 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 ZNF414Q96IQ9 312 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 LINC01600Q96MT4 127 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 IGHV3-72A0A0B4J1Y9 119 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 CCL21O00585 134 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 PAX4O43316 350 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 SLC25A16P16260 332 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 ZFP2Q6ZN57 461 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
GARNL3-201ENST00000373386 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 TRBV19A0A075B6N1 114 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 MRPS12O15235 138 aaKnown RBP6.27□□□□□ -1.41
GARNL3-201ENST00000373386 ACYP1P07311 99 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 DPM3Q9P2X0 92 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 K7EIM0 57 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 IGKV1-17P01599 117 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 AAMDCQ9H7C9 122 aa6.27□□□□□ -1.41
GARNL3-201ENST00000373386 SMG1Q96Q15 3661 aaKnown RBP6.27□□□□□ -1.41
GARNL3-201ENST00000373386 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 APELAP0DMC3 54 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 PIEZO2Q9H5I5 2752 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 TRBV7-3A0A075B6L6 115 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 TRAV41A0A0B4J266 112 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 MINOS1Q5TGZ0 78 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 LINC00643Q86TS7 51 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 PIP4P2Q8N4L2 257 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 CCDC140Q96MF4 163 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 MINOS1-NBL1R4GNA1 71 aa6.26□□□□□ -1.41
GARNL3-201ENST00000373386 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
GARNL3-201ENST00000373386 C11orf71Q6IPW1 123 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 U3KQK5 164 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 PLCE1Q9P212 2302 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 PTPRQQ9UMZ3 2332 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 IGLV11-55A0A075B6I3 123 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 BUB3O43684 328 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 Q8N6K4 173 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 ZNF491Q8N8L2 437 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
GARNL3-201ENST00000373386 ORMDL2Q53FV1 153 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 ORMDL3Q8N138 153 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 EEF1AKMT3Q96AZ1 226 aa6.25□□□□□ -1.41
GARNL3-201ENST00000373386 D6R8Y8 96 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 ITPR1Q14643 2758 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 PLGLAQ15195 96 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 ARFGEF3Q5TH69 2177 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 RELNP78509 3460 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 A0A096LNJ9 63 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 HBDP02042 147 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 SYNJ2BPP57105 145 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 FAM104BQ5XKR9 115 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
GARNL3-201ENST00000373386 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
GARNL3-201ENST00000373386 TEX49A0A1B0GTD5 131 aa6.23□□□□□ -1.41
GARNL3-201ENST00000373386 CRIP1P50238 77 aa6.23□□□□□ -1.41
GARNL3-201ENST00000373386 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
GARNL3-201ENST00000373386 MRPS36P82909 103 aaKnown RBP6.23□□□□□ -1.41
GARNL3-201ENST00000373386 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
GARNL3-201ENST00000373386 LYZL1Q6UWQ5 148 aa6.23□□□□□ -1.41
GARNL3-201ENST00000373386 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
GARNL3-201ENST00000373386 LOC389332A0A1B0GUA5 103 aa6.23□□□□□ -1.41
GARNL3-201ENST00000373386 C8orf49Q96NF6 230 aa6.23□□□□□ -1.41
GARNL3-201ENST00000373386 PLXNB1O43157 2135 aa6.23□□□□□ -1.41
GARNL3-201ENST00000373386 ICE1Q9Y2F5 2266 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 FANCD2OSQ96PS1 177 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 SVILO95425 2214 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 SH2D1AO60880 128 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 COX7A1P24310 79 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 SAA4P35542 130 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 UBE2D1P51668 147 aa6.22□□□□□ -1.41
GARNL3-201ENST00000373386 ERCC8Q13216 396 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms