RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 TRBV7-1A0A0A6YYK4 115 aa12□□□□□ -0.49
PABPC4-201ENST00000372856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12□□□□□ -0.496e-9■■■■□ 26.3
PABPC4-201ENST00000372856 TEX49A0A1B0GTD5 131 aa12□□□□□ -0.49
PABPC4-201ENST00000372856 PRADC1Q9BSG0 188 aa12□□□□□ -0.49
PABPC4-201ENST00000372856 SMIM2Q9BVW6 85 aa12□□□□□ -0.49
PABPC4-201ENST00000372856 UBTD1Q9HAC8 227 aa12□□□□□ -0.49
PABPC4-201ENST00000372856 SLC25A16P16260 332 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 ASIPP42127 132 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 UBE2D1P51668 147 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 NDUFA11Q86Y39 141 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 Q8N1Y9 231 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 MRPL53Q96EL3 112 aaKnown RBP11.99□□□□□ -0.49
PABPC4-201ENST00000372856 U3KQE9 123 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 CRYBG3Q68DQ2 2970 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 PLNP26678 52 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 C14orf178Q8N769 122 aaPredicted RBP11.99□□□□□ -0.49
PABPC4-201ENST00000372856 OR10J6PQ8NGY7 276 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
PABPC4-201ENST00000372856 BPESC1Q9GZL8 116 aa11.99□□□□□ -0.49
PABPC4-201ENST00000372856 IGHV4-4A0A075B6R2 117 aa11.98□□□□□ -0.49
PABPC4-201ENST00000372856 S100A4P26447 101 aaKnown RBP11.98□□□□□ -0.49
PABPC4-201ENST00000372856 UNQ9165/PRO28630Q6UXU0 137 aa11.98□□□□□ -0.49
PABPC4-201ENST00000372856 C5orf56Q8N8D9 126 aa11.98□□□□□ -0.49
PABPC4-201ENST00000372856 IGKV3-7A0A075B6H7 116 aa11.98□□□□□ -0.49
PABPC4-201ENST00000372856 TRBV12-3P01733 135 aa11.98□□□□□ -0.49
PABPC4-201ENST00000372856 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
PABPC4-201ENST00000372856 TRAV8-4A0A0B4J246 113 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 NPFFO15130 113 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 KLK9Q2XQG4 91 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 C5orf47Q569G3 176 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 ODF3Q96PU9 254 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 KLK9Q9UKQ9 250 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 EMP1P54849 157 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 F8VRH5 84 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 H7C1H1 209 aa11.97□□□□□ -0.49
PABPC4-201ENST00000372856 BEX4Q9NWD9 120 aaPredicted RBP11.97□□□□□ -0.49
PABPC4-201ENST00000372856 TRAV41A0A0B4J266 112 aa11.96□□□□□ -0.49
PABPC4-201ENST00000372856 MGPP08493 103 aa11.96□□□□□ -0.49
PABPC4-201ENST00000372856 CD7P09564 240 aa11.96□□□□□ -0.49
PABPC4-201ENST00000372856 SUMO2P61956 95 aaKnown RBP11.96□□□□□ -0.49
PABPC4-201ENST00000372856 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.49
PABPC4-201ENST00000372856 DEFB104AQ8WTQ1 72 aa11.96□□□□□ -0.49
PABPC4-201ENST00000372856 TRAV2A0A0B4J234 112 aa11.96□□□□□ -0.5
PABPC4-201ENST00000372856 F6UB75 175 aa11.96□□□□□ -0.5
PABPC4-201ENST00000372856 LMO4P61968 165 aa11.96□□□□□ -0.5
PABPC4-201ENST00000372856 ZFAND2AQ8N6M9 145 aa11.96□□□□□ -0.5
PABPC4-201ENST00000372856 NRGNQ92686 78 aa11.96□□□□□ -0.5
PABPC4-201ENST00000372856 CSMD2Q7Z408 3487 aa11.96□□□□□ -0.5
PABPC4-201ENST00000372856 HIVEP3Q5T1R4 2406 aa11.96□□□□□ -0.5
PABPC4-201ENST00000372856 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
PABPC4-201ENST00000372856 C9orf139Q6ZV77 190 aa11.95□□□□□ -0.5
PABPC4-201ENST00000372856 GPHB5Q86YW7 130 aa11.95□□□□□ -0.5
PABPC4-201ENST00000372856 SBSPONQ8IVN8 264 aa11.95□□□□□ -0.5
PABPC4-201ENST00000372856 ITLN2Q8WWU7 325 aaPredicted RBP11.95□□□□□ -0.5
PABPC4-201ENST00000372856 KLRB1Q12918 225 aa11.95□□□□□ -0.5
PABPC4-201ENST00000372856 PHLDA3Q9Y5J5 127 aa11.95□□□□□ -0.5
PABPC4-201ENST00000372856 ZNF56Q15929 161 aa11.95□□□□□ -0.5
PABPC4-201ENST00000372856 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 CFC1P0CG37 223 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
PABPC4-201ENST00000372856 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
PABPC4-201ENST00000372856 GNRH2O43555 120 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 IGHV3-11P01762 117 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 ORMDL2Q53FV1 153 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 BRD3OSQ6XYD6 125 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 LINC01587Q99440 93 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 TMEM126AQ9H061 195 aa11.94□□□□□ -0.5
PABPC4-201ENST00000372856 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
PABPC4-201ENST00000372856 CACNA1AO00555 2505 aa11.93□□□□□ -0.5
PABPC4-201ENST00000372856 TOMM6Q96B49 74 aa11.93□□□□□ -0.5
PABPC4-201ENST00000372856 LINC00477Q96M19 166 aa11.93□□□□□ -0.5
PABPC4-201ENST00000372856 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
PABPC4-201ENST00000372856 MDFICQ9P1T7 246 aa11.93□□□□□ -0.5
PABPC4-201ENST00000372856 TRAV12-1A0A0B4J245 112 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 C2orf66Q6UXQ4 117 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 SPXQ9BT56 116 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 Q1RN00 199 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 Q6Q795 121 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 Q6ZS46 218 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
PABPC4-201ENST00000372856 POLQO75417 2590 aa11.91□□□□□ -0.5
PABPC4-201ENST00000372856 BAALCQ8WXS3 180 aa11.91□□□□□ -0.5
PABPC4-201ENST00000372856 ZFYVE26Q68DK2 2539 aa11.91□□□□□ -0.5
PABPC4-201ENST00000372856 UTP20O75691 2785 aaKnown RBP11.91□□□□□ -0.5
PABPC4-201ENST00000372856 SMIM9A6NGZ8 99 aa11.91□□□□□ -0.5
PABPC4-201ENST00000372856 LINC01619G3V211 115 aa11.91□□□□□ -0.5
PABPC4-201ENST00000372856 LY6EQ16553 131 aa11.91□□□□□ -0.5
PABPC4-201ENST00000372856 PRO1854Q9UHT4 67 aa11.91□□□□□ -0.5
PABPC4-201ENST00000372856 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
PABPC4-201ENST00000372856 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
PABPC4-201ENST00000372856 C9orf153Q5TBE3 101 aa11.9□□□□□ -0.5
PABPC4-201ENST00000372856 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
PABPC4-201ENST00000372856 ELANEP08246 267 aa11.9□□□□□ -0.5
PABPC4-201ENST00000372856 OVOL1O14753 267 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 CSPG4Q6UVK1 2322 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 CREBBPQ92793 2442 aa11.89□□□□□ -0.51
PABPC4-201ENST00000372856 SOCS3O14543 225 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms