RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 FBN2P35556 2912 aa12.49□□□□□ -0.41
PCIF1-201ENST00000372409 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
PCIF1-201ENST00000372409 E9PLD3 99 aa12.49□□□□□ -0.41
PCIF1-201ENST00000372409 RPL39P62891 51 aaKnown RBP12.49□□□□□ -0.41
PCIF1-201ENST00000372409 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
PCIF1-201ENST00000372409 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
PCIF1-201ENST00000372409 KIR2DL4Q99706 377 aa12.48□□□□□ -0.41
PCIF1-201ENST00000372409 PSMB8P28062 276 aa12.47□□□□□ -0.41
PCIF1-201ENST00000372409 LRRK2Q5S007 2527 aa12.47□□□□□ -0.41
PCIF1-201ENST00000372409 CRYGDP07320 174 aa12.47□□□□□ -0.41
PCIF1-201ENST00000372409 POM121L12Q8N7R1 296 aa12.47□□□□□ -0.41
PCIF1-201ENST00000372409 KLHL30-AS1Q8NEE0 82 aa12.47□□□□□ -0.41
PCIF1-201ENST00000372409 MDFICQ9P1T7 246 aa12.47□□□□□ -0.41
PCIF1-201ENST00000372409 ZNF256Q9Y2P7 627 aaPredicted RBP12.47□□□□□ -0.41
PCIF1-201ENST00000372409 IGHV4OR15-8A0A075B7B6 117 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 A0A087WW49 117 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 VCYO14598 125 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 ZNF56Q15929 161 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 AMTNQ6UX39 209 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 FOXI2Q6ZQN5 318 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 C11orf86A6NJI1 115 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 H3BMG7 143 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 TSHBP01222 138 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.41
PCIF1-201ENST00000372409 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.41
PCIF1-201ENST00000372409 PLEKHB2Q96CS7 222 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 DUX5Q96PT3 197 aa12.46□□□□□ -0.41
PCIF1-201ENST00000372409 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.42
PCIF1-201ENST00000372409 MXRA5Q9NR99 2828 aa12.46□□□□□ -0.42
PCIF1-201ENST00000372409 TEX48A0A1B0GUV7 120 aa12.46□□□□□ -0.42
PCIF1-201ENST00000372409 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.42
PCIF1-201ENST00000372409 SPINK13Q1W4C9 94 aa12.46□□□□□ -0.42
PCIF1-201ENST00000372409 SAMD13Q5VXD3 122 aa12.46□□□□□ -0.42
PCIF1-201ENST00000372409 MAPK1IP1LQ8NDC0 245 aa12.46□□□□□ -0.42
PCIF1-201ENST00000372409 SYNJ2BPP57105 145 aa12.45□□□□□ -0.42
PCIF1-201ENST00000372409 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
PCIF1-201ENST00000372409 SORL1Q92673 2214 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 PMVKQ15126 192 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 RRN3P1Q2M238 152 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 Q8N1Y9 231 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 IGHV3-16A0A0C4DH30 117 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 A0A0J9YX75 114 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
PCIF1-201ENST00000372409 WFDC2Q14508 124 aa12.44□□□□□ -0.42
PCIF1-201ENST00000372409 IGLV4-69A0A075B6H9 119 aa12.43□□□□□ -0.42
PCIF1-201ENST00000372409 TMEM170BQ5T4T1 132 aa12.43□□□□□ -0.42
PCIF1-201ENST00000372409 HERVK_113P61574 105 aa12.43□□□□□ -0.42
PCIF1-201ENST00000372409 SYT8Q8NBV8 401 aa12.43□□□□□ -0.42
PCIF1-201ENST00000372409 ZNF462Q96JM2 2506 aa12.42□□□□□ -0.42
PCIF1-201ENST00000372409 LINC01619G3V211 115 aa12.42□□□□□ -0.42
PCIF1-201ENST00000372409 RPL32P62910 135 aaKnown RBP12.42□□□□□ -0.42
PCIF1-201ENST00000372409 LGALS9O00182 355 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 C9orf85Q96MD7 179 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 MRPL16Q9NX20 251 aaKnown RBP12.41□□□□□ -0.42
PCIF1-201ENST00000372409 PGPEP1Q9NXJ5 209 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 K7EQG2 157 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 TGFAP01135 160 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 COX6B1P14854 86 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 GATA3P23771 443 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 PAPPA-AS1Q5QFB9 102 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 TMEM141Q96I45 108 aa12.41□□□□□ -0.42
PCIF1-201ENST00000372409 IGHV1OR15-1A0A075B7D0 117 aa12.4□□□□□ -0.42
PCIF1-201ENST00000372409 F8W1H4 67 aa12.4□□□□□ -0.42
PCIF1-201ENST00000372409 HTN1P15515 57 aa12.4□□□□□ -0.42
PCIF1-201ENST00000372409 DOPEY1Q5JWR5 2465 aa12.4□□□□□ -0.42
PCIF1-201ENST00000372409 TRBV27A0A0K0K1C4 114 aa12.4□□□□□ -0.42
PCIF1-201ENST00000372409 LINC01356Q8N9X3 169 aa12.4□□□□□ -0.42
PCIF1-201ENST00000372409 TLN2Q9Y4G6 2542 aa12.4□□□□□ -0.42
PCIF1-201ENST00000372409 TMEM238LA0A1B0GVL6 79 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 A0A1B0GWB2 263 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 A6NJY4 79 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 TIMM17AQ99595 171 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 OPRPNQ99935 248 aaPredicted RBP12.39□□□□□ -0.43
PCIF1-201ENST00000372409 CREBBPQ92793 2442 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 APOMO95445 188 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 MORN3Q6PF18 240 aaPredicted RBP12.39□□□□□ -0.43
PCIF1-201ENST00000372409 SH2D6Q7Z4S9 175 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 ODF3Q96PU9 254 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 M0QY20 66 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 ETDBQ3ZM63 59 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 ZNF580Q9UK33 172 aa12.39□□□□□ -0.43
PCIF1-201ENST00000372409 ZNF469Q96JG9 3925 aaPredicted RBP12.38□□□□□ -0.43
PCIF1-201ENST00000372409 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
PCIF1-201ENST00000372409 PTPN13Q12923 2485 aa12.38□□□□□ -0.43
PCIF1-201ENST00000372409 DSCR9P59020 149 aa12.38□□□□□ -0.43
PCIF1-201ENST00000372409 TRBV6-5A0A0K0K1A5 114 aa12.37□□□□□ -0.43
PCIF1-201ENST00000372409 HOXD3P31249 432 aaPredicted RBP12.37□□□□□ -0.43
PCIF1-201ENST00000372409 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
PCIF1-201ENST00000372409 SPANXB1Q9NS25 103 aaPredicted RBP12.37□□□□□ -0.43
PCIF1-201ENST00000372409 LOC107984156A0A0G2JMH3 177 aa12.37□□□□□ -0.43
PCIF1-201ENST00000372409 ARL17AQ8IVW1 177 aa12.37□□□□□ -0.43
PCIF1-201ENST00000372409 TRPT1Q86TN4 253 aaKnown RBP12.36□□□□□ -0.43
PCIF1-201ENST00000372409 A0A0J9YY99 117 aa12.36□□□□□ -0.43
PCIF1-201ENST00000372409 TEX15Q9BXT5 2789 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms