RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 XCL1P47992 114 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 MRPL36Q9P0J6 103 aaKnown RBP8.85□□□□□ -0.99
PTPRF-203ENST00000372407 KMT2EQ8IZD2 1858 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 CCL24O00175 119 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 C11orf1Q9H5F2 150 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 WI2-2373I1.2A0A1W2PRP0 233 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 A4D1N5 150 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 HIGD1BQ9P298 99 aa8.85□□□□□ -0.99
PTPRF-203ENST00000372407 TRAV12-1A0A0B4J245 112 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 DEFB136Q30KP8 78 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 C5orf38Q86SI9 138 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 CEP192Q8TEP8 1941 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 PIEZO2Q9H5I5 2752 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 PRAC2D3DTV9 90 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 RMI2Q96E14 147 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 ODF3L1Q8IXM7 274 aa8.84□□□□□ -0.99
PTPRF-203ENST00000372407 E7EUB6 86 aa8.84□□□□□ -1
PTPRF-203ENST00000372407 IGLV2-23P01705 113 aa8.84□□□□□ -1
PTPRF-203ENST00000372407 IGHV4-38-2P0DP08 117 aa8.84□□□□□ -1
PTPRF-203ENST00000372407 CTRLP40313 264 aa8.84□□□□□ -1
PTPRF-203ENST00000372407 SEM1Q6ZVN7 128 aa8.84□□□□□ -1
PTPRF-203ENST00000372407 PLXNB3Q9ULL4 1909 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 FXYD2P54710 66 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 C9orf47Q6ZRZ4 202 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 TTTY13Q9BZ97 58 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 C10orf142B7Z368 130 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 FRMD6-AS1P0C7T7 363 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 PCNTO95613 3336 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 MED12LQ86YW9 2145 aa8.83□□□□□ -1
PTPRF-203ENST00000372407 TLN1Q9Y490 2541 aaKnown RBP8.83□□□□□ -1
PTPRF-203ENST00000372407 K7EMT4 169 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 ACYP1P07311 99 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 C5orf56Q8N8D9 126 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 IGHV4-30-2A0A087WSY4 118 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 TRBV6-1A0A0K0K1D8 114 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 P0C879 139 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 APRG1Q8IVJ8 170 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 H0YGX0 51 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 MSMPQ1L6U9 139 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 ORMDL1Q9P0S3 153 aa8.82□□□□□ -1
PTPRF-203ENST00000372407 PCDH15Q96QU1 1955 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 A0A0J9YY99 117 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 PROP1O75360 226 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 SLURP1P55000 103 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 TEN1Q86WV5 123 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 TRAV4A0A0B4J268 109 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 C19orf71A6NCJ1 209 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 TRACP01848 142 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 TIMM17AQ99595 171 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 NCKAP5O14513 1909 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 E9PLD3 99 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 MED14OSP0DP75 135 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 Q8N1Y9 231 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 Q8N7P7 452 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 Q8NA96 180 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
PTPRF-203ENST00000372407 CHD8Q9HCK8 2581 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 TAX1BP3O14907 124 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 RPL39P62891 51 aaKnown RBP8.8□□□□□ -1
PTPRF-203ENST00000372407 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
PTPRF-203ENST00000372407 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
PTPRF-203ENST00000372407 C10orf105Q8TEF2 133 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 CITED1Q99966 193 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
PTPRF-203ENST00000372407 MUC22E2RYF6 1773 aaPredicted RBP8.8□□□□□ -1
PTPRF-203ENST00000372407 TMEM131Q92545 1883 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 WFDC2Q14508 124 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 LINC01620Q4KN68 170 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 FANCD2OSQ96PS1 177 aa8.8□□□□□ -1
PTPRF-203ENST00000372407 ANKRD11Q6UB99 2663 aaPredicted RBP8.8□□□□□ -1
PTPRF-203ENST00000372407 RS1O15537 224 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 CGB3P0DN86 165 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 CGB7P0DN87 165 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 ATP6V0E2Q8NHE4 81 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 ODF1Q14990 250 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 GPHB5Q86YW7 130 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 Q6ZQT7 251 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 ZNF503Q96F45 646 aa8.79□□□□□ -1
PTPRF-203ENST00000372407 HIST2H2BCQ6DN03 193 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 Q71RC1 249 aaPredicted RBP8.78□□□□□ -1
PTPRF-203ENST00000372407 RNASE8Q8TDE3 154 aaKnown RBP8.78□□□□□ -1
PTPRF-203ENST00000372407 TNRC6AQ8NDV7 1962 aaKnown RBP8.78□□□□□ -1
PTPRF-203ENST00000372407 B5MCH6 92 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 IGHG2P01859 326 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 C16orf74Q96GX8 76 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 IGKV2D-24A0A075B6R9 120 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 IGKV1D-37A0A075B6S9 117 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 C2orf70A6NJV1 201 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 GYPEP15421 78 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 ADORA2A-AS1P86434 159 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 SPATA12Q7Z6I5 190 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 BAALCQ8WXS3 180 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 C1orf43Q9BWL3 253 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 CENPFP49454 3210 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 DNAH12Q6ZR08 3092 aa8.78□□□□□ -1
PTPRF-203ENST00000372407 K7EQD1 137 aa8.77□□□□□ -1
PTPRF-203ENST00000372407 MRPL23Q16540 153 aaKnown RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms