RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 IGKV3D-20A0A0C4DH25 116 aa9.67□□□□□ -0.86
GPC3-201ENST00000370818 TMEM89A2RUT3 159 aa9.67□□□□□ -0.86
GPC3-201ENST00000370818 SMKR1H3BMG3 65 aa9.67□□□□□ -0.86
GPC3-201ENST00000370818 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
GPC3-201ENST00000370818 ANAPC13Q9BS18 74 aa9.67□□□□□ -0.86
GPC3-201ENST00000370818 B5MCH6 92 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 DOPEY2Q9Y3R5 2298 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 K7EMT4 169 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 PRSS1P07477 247 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 DEFB1P60022 68 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 Q6ZQT7 251 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 WFDC11Q8NEX6 87 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 UFC1Q9Y3C8 167 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
GPC3-201ENST00000370818 IGKV3-7A0A075B6H7 116 aa9.65□□□□□ -0.86
GPC3-201ENST00000370818 TRBV7-9A0A0J9YWB2 115 aa9.65□□□□□ -0.86
GPC3-201ENST00000370818 PRSS29PA6NIE9 313 aa9.65□□□□□ -0.86
GPC3-201ENST00000370818 RPL11P62913 178 aaKnown RBP9.65□□□□□ -0.86
GPC3-201ENST00000370818 CNFNQ9BYD5 112 aa9.65□□□□□ -0.86
GPC3-201ENST00000370818 CKS2P33552 79 aa9.65□□□□□ -0.87
GPC3-201ENST00000370818 HERV-K104P63124 156 aa9.65□□□□□ -0.87
GPC3-201ENST00000370818 PRR9Q5T870 116 aa9.65□□□□□ -0.87
GPC3-201ENST00000370818 MORN3Q6PF18 240 aaPredicted RBP9.65□□□□□ -0.87
GPC3-201ENST00000370818 MYOZ3Q8TDC0 251 aa9.65□□□□□ -0.87
GPC3-201ENST00000370818 TMEM158Q8WZ71 300 aa9.65□□□□□ -0.87
GPC3-201ENST00000370818 CARD19Q96LW7 228 aa9.65□□□□□ -0.87
GPC3-201ENST00000370818 LEPP41159 167 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 HIST1H4GQ99525 98 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 TRBV7-3A0A075B6L6 115 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 DPM2O94777 84 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 NHLRC4P0CG21 123 aaPredicted RBP9.64□□□□□ -0.87
GPC3-201ENST00000370818 PLA2G2AP14555 144 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 FCER1GP30273 86 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 TWIST1Q15672 202 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 DUX5Q96PT3 197 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
GPC3-201ENST00000370818 SRD5A1P18405 259 aa9.63□□□□□ -0.87
GPC3-201ENST00000370818 KMT2BQ9UMN6 2715 aaPredicted RBP9.63□□□□□ -0.87
GPC3-201ENST00000370818 LINC01546A6NGU7 62 aa9.63□□□□□ -0.87
GPC3-201ENST00000370818 ELANEP08246 267 aa9.63□□□□□ -0.87
GPC3-201ENST00000370818 ZFAND2AQ8N6M9 145 aa9.63□□□□□ -0.87
GPC3-201ENST00000370818 PTH2Q96A98 100 aa9.63□□□□□ -0.87
GPC3-201ENST00000370818 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
GPC3-201ENST00000370818 FOXC2Q99958 501 aa9.63□□□□□ -0.87
GPC3-201ENST00000370818 F6UB75 175 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 OVOL1O14753 267 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 TMEM160Q9NX00 188 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 ZFAND6Q6FIF0 208 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 RNF152Q8N8N0 203 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 OR10J6PQ8NGY7 276 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
GPC3-201ENST00000370818 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
GPC3-201ENST00000370818 Q8N2B8 174 aa9.61□□□□□ -0.87
GPC3-201ENST00000370818 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
GPC3-201ENST00000370818 DLX4Q92988 240 aaPredicted RBP9.61□□□□□ -0.87
GPC3-201ENST00000370818 FAM19A4Q96LR4 140 aa9.61□□□□□ -0.87
GPC3-201ENST00000370818 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
GPC3-201ENST00000370818 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
GPC3-201ENST00000370818 TEX29Q8N6K0 151 aa9.61□□□□□ -0.87
GPC3-201ENST00000370818 UBE2E2Q96LR5 201 aa9.61□□□□□ -0.87
GPC3-201ENST00000370818 IGHV4OR15-8A0A075B7B6 117 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 A0A087WW49 117 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 J3QKU1 62 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 ATP5LO75964 103 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 RNF185Q96GF1 192 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
GPC3-201ENST00000370818 J3KRW8 73 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 SYNJ2BPP57105 145 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
GPC3-201ENST00000370818 TEN1Q86WV5 123 aa9.59□□□□□ -0.87
GPC3-201ENST00000370818 CITED1Q99966 193 aa9.59□□□□□ -0.87
GPC3-201ENST00000370818 CCDC168Q8NDH2 2452 aa9.59□□□□□ -0.87
GPC3-201ENST00000370818 LINC01619G3V211 115 aa9.59□□□□□ -0.87
GPC3-201ENST00000370818 HOXD3P31249 432 aaPredicted RBP9.59□□□□□ -0.87
GPC3-201ENST00000370818 ZFP2Q6ZN57 461 aa9.59□□□□□ -0.87
GPC3-201ENST00000370818 VCX2Q9H322 139 aa9.59□□□□□ -0.87
GPC3-201ENST00000370818 PSMB2P49721 201 aa9.58□□□□□ -0.88
GPC3-201ENST00000370818 RPL32P62910 135 aaKnown RBP9.58□□□□□ -0.88
GPC3-201ENST00000370818 ANXA2RQ3ZCQ2 193 aa9.58□□□□□ -0.88
GPC3-201ENST00000370818 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
GPC3-201ENST00000370818 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
GPC3-201ENST00000370818 SMIM20Q8N5G0 67 aa9.58□□□□□ -0.88
GPC3-201ENST00000370818 PDZD2O15018 2839 aa9.58□□□□□ -0.88
GPC3-201ENST00000370818 LGALS9O00182 355 aa9.57□□□□□ -0.88
GPC3-201ENST00000370818 ZNF688P0C7X2 276 aa9.57□□□□□ -0.88
GPC3-201ENST00000370818 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
GPC3-201ENST00000370818 NXT2Q9NPJ8 142 aaKnown RBP9.57□□□□□ -0.88
GPC3-201ENST00000370818 SONP18583 2426 aaKnown RBP9.56□□□□□ -0.88
GPC3-201ENST00000370818 HELZ2Q9BYK8 2649 aaKnown RBP9.56□□□□□ -0.88
GPC3-201ENST00000370818 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
GPC3-201ENST00000370818 RHODO00212 210 aa9.56□□□□□ -0.88
GPC3-201ENST00000370818 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
GPC3-201ENST00000370818 ID1P41134 155 aa9.56□□□□□ -0.88
GPC3-201ENST00000370818 CUBNO60494 3623 aa9.56□□□□□ -0.88
GPC3-201ENST00000370818 IGHV4-4A0A075B6R2 117 aa9.56□□□□□ -0.88
GPC3-201ENST00000370818 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms