RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 RPL39LQ96EH5 51 aaKnown RBP9.8□□□□□ -0.84
HCFC1-202ENST00000369984 USP17L23D6RBM5 183 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 FHL1Q13642 323 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 C3orf22Q8N5N4 141 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 ZNF747Q9BV97 191 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 SPANXB1Q9NS25 103 aaPredicted RBP9.8□□□□□ -0.84
HCFC1-202ENST00000369984 C5orf38Q86SI9 138 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 HOXB4P17483 251 aaPredicted RBP9.8□□□□□ -0.84
HCFC1-202ENST00000369984 TMEM61Q8N0U2 210 aa9.8□□□□□ -0.84
HCFC1-202ENST00000369984 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
HCFC1-202ENST00000369984 H0YGX0 51 aa9.79□□□□□ -0.84
HCFC1-202ENST00000369984 DAZ2Q13117 558 aaKnown RBP9.79□□□□□ -0.84
HCFC1-202ENST00000369984 Q6ZR03 302 aa9.79□□□□□ -0.84
HCFC1-202ENST00000369984 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
HCFC1-202ENST00000369984 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
HCFC1-202ENST00000369984 CCL18P55774 89 aa9.79□□□□□ -0.84
HCFC1-202ENST00000369984 DIAPH2-AS1Q14236 149 aa9.79□□□□□ -0.84
HCFC1-202ENST00000369984 IGLV3-9A0A075B6K5 115 aa9.79□□□□□ -0.84
HCFC1-202ENST00000369984 WFDC2Q14508 124 aa9.79□□□□□ -0.84
HCFC1-202ENST00000369984 WFDC11Q8NEX6 87 aa9.79□□□□□ -0.84
HCFC1-202ENST00000369984 PTPRBP23467 1997 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 JMJD7-PLA2G4BH0Y9G9 81 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 IL15RAQ13261 267 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 CCL24O00175 119 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 IGLV10-54A0A075B6I4 117 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 LOXP28300 417 aaPredicted RBP9.78□□□□□ -0.84
HCFC1-202ENST00000369984 ARTNQ5T4W7 220 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 HIST2H2BCQ6DN03 193 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 NDUFC2-KCTD14E9PQ53 114 aa9.78□□□□□ -0.84
HCFC1-202ENST00000369984 ZNF491Q8N8L2 437 aa9.77□□□□□ -0.84
HCFC1-202ENST00000369984 CAMK2N2Q96S95 79 aa9.77□□□□□ -0.84
HCFC1-202ENST00000369984 LYPD6BQ8NI32 183 aa9.77□□□□□ -0.85
HCFC1-202ENST00000369984 G3V4G9 280 aa9.77□□□□□ -0.85
HCFC1-202ENST00000369984 KIR2DL5BQ8NHK3 375 aa9.77□□□□□ -0.85
HCFC1-202ENST00000369984 TM2D2Q9BX73 214 aa9.77□□□□□ -0.85
HCFC1-202ENST00000369984 COX7A2LO14548 114 aa9.77□□□□□ -0.85
HCFC1-202ENST00000369984 IGLV2-23P01705 113 aa9.77□□□□□ -0.85
HCFC1-202ENST00000369984 K7EQD1 137 aa9.77□□□□□ -0.85
HCFC1-202ENST00000369984 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 TEN1Q86WV5 123 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 RNF152Q8N8N0 203 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 GYPEP15421 78 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 TRBV12-3P01733 135 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 FAM110AQ9BQ89 295 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 RAI1Q7Z5J4 1906 aaPredicted RBP9.76□□□□□ -0.85
HCFC1-202ENST00000369984 TMEM256-PLSCR3K7ERE1 68 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 B9D2Q9BPU9 175 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 A6NED7 52 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 WISP1O95388 367 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
HCFC1-202ENST00000369984 RNASE8Q8TDE3 154 aaKnown RBP9.76□□□□□ -0.85
HCFC1-202ENST00000369984 H3BUA1 57 aa9.75□□□□□ -0.85
HCFC1-202ENST00000369984 K7ENP7 123 aa9.75□□□□□ -0.85
HCFC1-202ENST00000369984 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
HCFC1-202ENST00000369984 CRIPAKQ8N1N5 446 aa9.75□□□□□ -0.85
HCFC1-202ENST00000369984 C16orf74Q96GX8 76 aa9.75□□□□□ -0.85
HCFC1-202ENST00000369984 APRG1Q8IVJ8 170 aa9.75□□□□□ -0.85
HCFC1-202ENST00000369984 UPK3BQ9BT76 320 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 PDE6GP18545 87 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 ZNF503-AS2A6NEH8 195 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 FANCD2OSQ96PS1 177 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 LENEPQ9Y5L5 61 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 A4D1N5 150 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 LGALS9O00182 355 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 DAND5Q8N907 189 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 FAM208BQ5VWN6 2430 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 ELANEP08246 267 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 SPRY2O43597 315 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 ATP5G1P05496 136 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 FOXI1Q12951 378 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 Q6ZUT4 128 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 ABCA2Q9BZC7 2435 aa9.74□□□□□ -0.85
HCFC1-202ENST00000369984 VPREB3Q9UKI3 123 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 NCR3O14931 201 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 Q8NFD4 153 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 C1orf147Q96MC9 270 aaPredicted RBP9.73□□□□□ -0.85
HCFC1-202ENST00000369984 SERP1Q9Y6X1 66 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 FAM236DA0A1B0GTK5 79 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 FAM236CP0DP71 79 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 C1orf195Q5TG92 126 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 CXCL5P42830 114 aa9.73□□□□□ -0.85
HCFC1-202ENST00000369984 AGPAT4-IT1Q9H0P7 198 aa9.72□□□□□ -0.85
HCFC1-202ENST00000369984 CCDC168Q8NDH2 2452 aa9.72□□□□□ -0.85
HCFC1-202ENST00000369984 NDUFV3P56181 108 aaKnown RBP9.72□□□□□ -0.85
HCFC1-202ENST00000369984 IGHV4-59P01825 116 aa9.72□□□□□ -0.85
HCFC1-202ENST00000369984 WI2-2373I1.2A0A1W2PRP0 233 aa9.72□□□□□ -0.85
HCFC1-202ENST00000369984 IGLV1-44P01699 117 aa9.72□□□□□ -0.85
HCFC1-202ENST00000369984 CLEC2BQ92478 149 aa9.72□□□□□ -0.85
HCFC1-202ENST00000369984 PRR4Q16378 134 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 CPAMD8Q8IZJ3 1885 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 PRR20EP86478 221 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 PRR20CP86479 221 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 PRR20DP86480 221 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 PRR20BP86481 221 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 PRR20AP86496 221 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 TDRG1Q3Y452 100 aa9.71□□□□□ -0.85
HCFC1-202ENST00000369984 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
HCFC1-202ENST00000369984 SLURP1P55000 103 aa9.71□□□□□ -0.86
HCFC1-202ENST00000369984 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms