RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 DUSP14O95147 198 aaKnown RBP13.16□□□□□ -0.3
CHTOP-203ENST00000368690 NXPH4O95158 308 aa13.16□□□□□ -0.3
CHTOP-203ENST00000368690 SRD5A1P18405 259 aa13.16□□□□□ -0.3
CHTOP-203ENST00000368690 OVOL1O14753 267 aa13.15□□□□□ -0.3
CHTOP-203ENST00000368690 TACC2O95359 2948 aa13.15□□□□□ -0.3
CHTOP-203ENST00000368690 TSHBP01222 138 aa13.15□□□□□ -0.3
CHTOP-203ENST00000368690 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
CHTOP-203ENST00000368690 KMT2BQ9UMN6 2715 aaPredicted RBP13.15□□□□□ -0.3
CHTOP-203ENST00000368690 TRBV7-9A0A0J9YWB2 115 aa13.15□□□□□ -0.3
CHTOP-203ENST00000368690 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
CHTOP-203ENST00000368690 APRG1Q8IVJ8 170 aa13.15□□□□□ -0.3
CHTOP-203ENST00000368690 MGPP08493 103 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 SCGB1C2P0DMR2 95 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 GAGE5Q13069 117 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 GAGE6Q13070 117 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 ECSCRQ19T08 205 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 ATP6V0E1O15342 81 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 OR10J6PQ8NGY7 276 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 FAM19A4Q96LR4 140 aa13.14□□□□□ -0.31
CHTOP-203ENST00000368690 IGHV3OR16-13A0A075B7E8 117 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 IGHV3-74A0A0B4J1X5 117 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 LINC01548A6NM66 108 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 SLC25A20O43772 301 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 P0DMU3 169 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 FAM231AP0DMU4 169 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 FAM231CP0DMU5 169 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 AMELXQ99217 191 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 POLR2KP53803 58 aaKnown RBP13.13□□□□□ -0.31
CHTOP-203ENST00000368690 TP53TG1Q9Y2A0 90 aa13.13□□□□□ -0.31
CHTOP-203ENST00000368690 A0A0B4J2C4 111 aa13.12□□□□□ -0.31
CHTOP-203ENST00000368690 RHODO00212 210 aa13.12□□□□□ -0.31
CHTOP-203ENST00000368690 ANXA2RQ3ZCQ2 193 aa13.12□□□□□ -0.31
CHTOP-203ENST00000368690 ZNF876PQ49A33 203 aa13.12□□□□□ -0.31
CHTOP-203ENST00000368690 Q6ZS46 218 aa13.12□□□□□ -0.31
CHTOP-203ENST00000368690 KIF25-AS1Q9Y6Z4 181 aa13.12□□□□□ -0.31
CHTOP-203ENST00000368690 ASH1LQ9NR48 2969 aaKnown RBP13.12□□□□□ -0.31
CHTOP-203ENST00000368690 IGF1P05019 195 aa13.11□□□□□ -0.31
CHTOP-203ENST00000368690 TSPEAR-AS2P59090 65 aa13.11□□□□□ -0.31
CHTOP-203ENST00000368690 ARHGAP32A7KAX9 2087 aa13.11□□□□□ -0.31
CHTOP-203ENST00000368690 IGHV3-49A0A0A0MS15 119 aa13.11□□□□□ -0.31
CHTOP-203ENST00000368690 VCYO14598 125 aa13.11□□□□□ -0.31
CHTOP-203ENST00000368690 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
CHTOP-203ENST00000368690 LINC00315P59091 139 aa13.11□□□□□ -0.31
CHTOP-203ENST00000368690 AJUBAQ96IF1 538 aa13.11□□□□□ -0.31
CHTOP-203ENST00000368690 J3QQQ9 107 aa13.1□□□□□ -0.31
CHTOP-203ENST00000368690 Q6Q795 121 aa13.1□□□□□ -0.31
CHTOP-203ENST00000368690 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
CHTOP-203ENST00000368690 SOCS3O14543 225 aa13.1□□□□□ -0.31
CHTOP-203ENST00000368690 IGHV3-33P01772 117 aa13.1□□□□□ -0.31
CHTOP-203ENST00000368690 CCL19Q99731 98 aa13.1□□□□□ -0.31
CHTOP-203ENST00000368690 LGALS3P17931 250 aaKnown RBP13.09□□□□□ -0.31
CHTOP-203ENST00000368690 GATA3P23771 443 aa13.08□□□□□ -0.31
CHTOP-203ENST00000368690 TMEM170BQ5T4T1 132 aa13.08□□□□□ -0.31
CHTOP-203ENST00000368690 TMEM263Q8WUH6 116 aaKnown RBP13.08□□□□□ -0.31
CHTOP-203ENST00000368690 SIRPDQ9H106 197 aa13.08□□□□□ -0.31
CHTOP-203ENST00000368690 CENPEQ02224 2701 aa13.08□□□□□ -0.32
CHTOP-203ENST00000368690 WNK2Q9Y3S1 2297 aa13.08□□□□□ -0.32
CHTOP-203ENST00000368690 C9JAW5 83 aa13.08□□□□□ -0.32
CHTOP-203ENST00000368690 LEPROTO15243 131 aa13.08□□□□□ -0.32
CHTOP-203ENST00000368690 TRBV6-5A0A0K0K1A5 114 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 FAM223BA6NKX1 122 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 FAM223AQ8IWN6 122 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 A0A0J9YX75 114 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 TRBV27A0A0K0K1C4 114 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 A4D1N5 150 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 G3V318 75 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 IGHV1-69P01742 117 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 NHLRC4P0CG21 123 aaPredicted RBP13.07□□□□□ -0.32
CHTOP-203ENST00000368690 RPL13AP40429 203 aaKnown RBP13.07□□□□□ -0.32
CHTOP-203ENST00000368690 GAGE2BQ13066 116 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 GAGE2EQ4V326 116 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 GAGE2DQ9UEU5 116 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 SPG11Q96JI7 2443 aa13.07□□□□□ -0.32
CHTOP-203ENST00000368690 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.06□□□□□ -0.32
CHTOP-203ENST00000368690 SPRY2O43597 315 aa13.06□□□□□ -0.32
CHTOP-203ENST00000368690 SNCGO76070 127 aa13.06□□□□□ -0.32
CHTOP-203ENST00000368690 SPANXA1Q9NS26 97 aa13.06□□□□□ -0.32
CHTOP-203ENST00000368690 J3KRW8 73 aa13.05□□□□□ -0.32
CHTOP-203ENST00000368690 UBE2E1P51965 193 aa13.05□□□□□ -0.32
CHTOP-203ENST00000368690 ATXN8Q156A1 80 aa13.05□□□□□ -0.32
CHTOP-203ENST00000368690 GNRH2O43555 120 aa13.05□□□□□ -0.32
CHTOP-203ENST00000368690 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
CHTOP-203ENST00000368690 EMP1P54849 157 aa13.05□□□□□ -0.32
CHTOP-203ENST00000368690 TMEM223A0PJW6 202 aa13.04□□□□□ -0.32
CHTOP-203ENST00000368690 NDUFV3P56181 108 aaKnown RBP13.04□□□□□ -0.32
CHTOP-203ENST00000368690 SUMO4Q6EEV6 95 aa13.04□□□□□ -0.32
CHTOP-203ENST00000368690 NRGNQ92686 78 aa13.04□□□□□ -0.32
CHTOP-203ENST00000368690 VPS13CQ709C8 3753 aa13.04□□□□□ -0.32
CHTOP-203ENST00000368690 TENM4Q6N022 2769 aa13.04□□□□□ -0.32
CHTOP-203ENST00000368690 CSMD2Q7Z408 3487 aa13.04□□□□□ -0.32
CHTOP-203ENST00000368690 EIF4EBP3O60516 100 aaPredicted RBP13.04□□□□□ -0.32
CHTOP-203ENST00000368690 RPL39P62891 51 aaKnown RBP13.04□□□□□ -0.32
CHTOP-203ENST00000368690 SDHAF1A6NFY7 115 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 LGALS9O00182 355 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 NDUFA4O00483 81 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 TGFAP01135 160 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 IGHV4-39P01824 125 aa13.03□□□□□ -0.32
CHTOP-203ENST00000368690 CRIP2P52943 208 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms