RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 GAGE13Q4V321 117 aa16.27■□□□□ 0.2
PFDN2-201ENST00000368010 TRAV8-6A0A0B4J262 113 aa16.26■□□□□ 0.19
PFDN2-201ENST00000368010 IGLV2-8P01709 118 aa16.26■□□□□ 0.19
PFDN2-201ENST00000368010 NKX2-5P52952 324 aaPredicted RBP16.26■□□□□ 0.19
PFDN2-201ENST00000368010 BLOC1S1P78537 153 aa16.26■□□□□ 0.19
PFDN2-201ENST00000368010 C14orf178Q8N769 122 aaPredicted RBP16.26■□□□□ 0.19
PFDN2-201ENST00000368010 OR10AG1Q8NH19 301 aa16.26■□□□□ 0.19
PFDN2-201ENST00000368010 GTSF1LQ9H1H1 148 aa16.26■□□□□ 0.19
PFDN2-201ENST00000368010 DYNC1H1Q14204 4646 aaKnown RBP16.25■□□□□ 0.19
PFDN2-201ENST00000368010 SNAI2O43623 268 aa16.25■□□□□ 0.19
PFDN2-201ENST00000368010 CRYGDP07320 174 aa16.25■□□□□ 0.19
PFDN2-201ENST00000368010 OR10J3Q5JRS4 329 aa16.25■□□□□ 0.19
PFDN2-201ENST00000368010 LELP1Q5T871 98 aa16.25■□□□□ 0.19
PFDN2-201ENST00000368010 DAZAP1Q96EP5 407 aaKnown RBP16.25■□□□□ 0.19
PFDN2-201ENST00000368010 SSBP4Q9BWG4 385 aaPredicted RBP16.25■□□□□ 0.19
PFDN2-201ENST00000368010 BOLA1Q9Y3E2 137 aa16.25■□□□□ 0.19
PFDN2-201ENST00000368010 PKHD1P08F94 4074 aa16.24■□□□□ 0.19
PFDN2-201ENST00000368010 IGHV3-38A0A0C4DH36 116 aa16.24■□□□□ 0.19
PFDN2-201ENST00000368010 OR5AL1P0C617 328 aa16.24■□□□□ 0.19
PFDN2-201ENST00000368010 LINC00694P0DN24 101 aa16.24■□□□□ 0.19
PFDN2-201ENST00000368010 NFE4Q86UQ8 179 aa16.24■□□□□ 0.19
PFDN2-201ENST00000368010 SPANXN1Q5VSR9 72 aa16.23■□□□□ 0.19
PFDN2-201ENST00000368010 Q6ZRN7 208 aaPredicted RBP16.23■□□□□ 0.19
PFDN2-201ENST00000368010 C10orf126Q8N4M7 172 aa16.23■□□□□ 0.19
PFDN2-201ENST00000368010 TRBV20OR9-2A0A075B6H5 130 aa16.22■□□□□ 0.19
PFDN2-201ENST00000368010 RPS20P60866 119 aaKnown RBP16.22■□□□□ 0.19
PFDN2-201ENST00000368010 OR2D3Q8NGH3 330 aa16.22■□□□□ 0.19
PFDN2-201ENST00000368010 BIN3Q9NQY0 253 aa16.22■□□□□ 0.19
PFDN2-201ENST00000368010 Q9UF83 564 aa16.22■□□□□ 0.19
PFDN2-201ENST00000368010 C19orf71A6NCJ1 209 aa16.21■□□□□ 0.19
PFDN2-201ENST00000368010 LINC01556Q5JQF7 62 aa16.21■□□□□ 0.19
PFDN2-201ENST00000368010 MSRB1Q9NZV6 116 aa16.21■□□□□ 0.19
PFDN2-201ENST00000368010 TNFRSF18Q9Y5U5 241 aa16.21■□□□□ 0.19
PFDN2-201ENST00000368010 MUC21A0A0G2JKD1 596 aa16.2■□□□□ 0.18
PFDN2-201ENST00000368010 MUC21A0A140T8X8 626 aa16.2■□□□□ 0.18
PFDN2-201ENST00000368010 KIAA1109Q2LD37 5005 aa16.19■□□□□ 0.18
PFDN2-201ENST00000368010 TRBV10-1A0A0K0K1A3 114 aa16.19■□□□□ 0.18
PFDN2-201ENST00000368010 P01737 135 aa16.19■□□□□ 0.18
PFDN2-201ENST00000368010 LYPD6BQ8NI32 183 aa16.19■□□□□ 0.18
PFDN2-201ENST00000368010 XKRY2A2RUG3 117 aa16.18■□□□□ 0.18
PFDN2-201ENST00000368010 RBFOX3A6NFN3 312 aa16.18■□□□□ 0.18
PFDN2-201ENST00000368010 C16orf90A8MZG2 172 aa16.18■□□□□ 0.18
PFDN2-201ENST00000368010 GZMBP10144 247 aa16.18■□□□□ 0.18
PFDN2-201ENST00000368010 ZNF56Q15929 161 aa16.18■□□□□ 0.18
PFDN2-201ENST00000368010 FER1L6-AS1Q8NA97 138 aa16.18■□□□□ 0.18
PFDN2-201ENST00000368010 TPPP3Q9BW30 176 aa16.18■□□□□ 0.18
PFDN2-201ENST00000368010 A0A087WWC5 75 aa16.17■□□□□ 0.18
PFDN2-201ENST00000368010 IGLC6P0CF74 106 aa16.17■□□□□ 0.18
PFDN2-201ENST00000368010 RAB4BP61018 213 aa16.17■□□□□ 0.18
PFDN2-201ENST00000368010 SSTP61278 116 aa16.17■□□□□ 0.18
PFDN2-201ENST00000368010 HERC2O95714 4834 aa16.16■□□□□ 0.18
PFDN2-201ENST00000368010 TMEM250H0YL14 139 aa16.16■□□□□ 0.18
PFDN2-201ENST00000368010 RPL36AP83881 106 aaKnown RBP16.16■□□□□ 0.18
PFDN2-201ENST00000368010 SPATA12Q7Z6I5 190 aa16.16■□□□□ 0.18
PFDN2-201ENST00000368010 RPL36ALQ969Q0 106 aaKnown RBP16.16■□□□□ 0.18
PFDN2-201ENST00000368010 AP1S3Q96PC3 154 aa16.16■□□□□ 0.18
PFDN2-201ENST00000368010 ERVFC1-1P60608 527 aa16.15■□□□□ 0.18
PFDN2-201ENST00000368010 IGHV3-30P01768 117 aa16.14■□□□□ 0.17
PFDN2-201ENST00000368010 IGHV3-33P01772 117 aa16.14■□□□□ 0.17
PFDN2-201ENST00000368010 SMIM17P0DL12 118 aa16.14■□□□□ 0.17
PFDN2-201ENST00000368010 IGHV3-30-3P0DP02 117 aa16.14■□□□□ 0.17
PFDN2-201ENST00000368010 IGHV3-30-5P0DP03 117 aa16.14■□□□□ 0.17
PFDN2-201ENST00000368010 TRBV7-3A0A075B6L6 115 aa16.13■□□□□ 0.17
PFDN2-201ENST00000368010 IBA57-AS1B1ANH7 110 aa16.13■□□□□ 0.17
PFDN2-201ENST00000368010 CACNG7P62955 275 aa16.13■□□□□ 0.17
PFDN2-201ENST00000368010 TOR2AQ5JU69 321 aa16.13■□□□□ 0.17
PFDN2-201ENST00000368010 NUDT10Q8NFP7 164 aa16.13■□□□□ 0.17
PFDN2-201ENST00000368010 NUDT11Q96G61 164 aa16.13■□□□□ 0.17
PFDN2-201ENST00000368010 F2Z2F3 143 aa16.12■□□□□ 0.17
PFDN2-201ENST00000368010 F5H697 171 aa16.12■□□□□ 0.17
PFDN2-201ENST00000368010 EREGO14944 169 aa16.12■□□□□ 0.17
PFDN2-201ENST00000368010 OR10G8Q8NGN5 311 aa16.12■□□□□ 0.17
PFDN2-201ENST00000368010 OCC1Q8TAD7 63 aa16.12■□□□□ 0.17
PFDN2-201ENST00000368010 UBE2D3P61077 147 aa16.11■□□□□ 0.17
PFDN2-201ENST00000368010 UBE2D2P62837 147 aa16.11■□□□□ 0.17
PFDN2-201ENST00000368010 EIF5A2Q9GZV4 153 aaKnown RBP16.11■□□□□ 0.17
PFDN2-201ENST00000368010 KIF25-AS1Q9Y6Z4 181 aa16.11■□□□□ 0.17
PFDN2-201ENST00000368010 K7EN84 100 aa16.1■□□□□ 0.17
PFDN2-201ENST00000368010 CEBPGP53567 150 aa16.1■□□□□ 0.17
PFDN2-201ENST00000368010 RPP21Q9H633 154 aaKnown RBP16.1■□□□□ 0.17
PFDN2-201ENST00000368010 KRTAP10-2P60368 255 aa16.09■□□□□ 0.17
PFDN2-201ENST00000368010 NEXN-AS1Q8NBZ9 246 aa16.09■□□□□ 0.17
PFDN2-201ENST00000368010 RNASE7Q9H1E1 156 aaKnown RBP16.09■□□□□ 0.17
PFDN2-201ENST00000368010 A0A087WTM6 91 aa16.08■□□□□ 0.16
PFDN2-201ENST00000368010 LAGE3Q14657 143 aa16.08■□□□□ 0.16
PFDN2-201ENST00000368010 LYZL1Q6UWQ5 148 aa16.08■□□□□ 0.16
PFDN2-201ENST00000368010 FAM210AQ96ND0 272 aa16.08■□□□□ 0.16
PFDN2-201ENST00000368010 Q9HAA7 133 aa16.08■□□□□ 0.16
PFDN2-201ENST00000368010 PSCAO43653 123 aa16.07■□□□□ 0.16
PFDN2-201ENST00000368010 NDUFS6O75380 124 aaKnown RBP16.07■□□□□ 0.16
PFDN2-201ENST00000368010 Q8N3U1 123 aa16.07■□□□□ 0.16
PFDN2-201ENST00000368010 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.07■□□□□ 0.16
PFDN2-201ENST00000368010 MGPP08493 103 aa16.06■□□□□ 0.16
PFDN2-201ENST00000368010 TRGC1P0CF51 173 aa16.06■□□□□ 0.16
PFDN2-201ENST00000368010 CTRLP40313 264 aa16.06■□□□□ 0.16
PFDN2-201ENST00000368010 URGCP-MRPS24S4R325 110 aa16.06■□□□□ 0.16
PFDN2-201ENST00000368010 WDR73Q6P4I2 378 aa16.04■□□□□ 0.16
PFDN2-201ENST00000368010 DAZ4Q86SG3 579 aaKnown RBP16.04■□□□□ 0.16
PFDN2-201ENST00000368010 NIT1Q86X76 327 aa16.04■□□□□ 0.16
PFDN2-201ENST00000368010 SMIM7Q9BQ49 75 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms