RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PDZD2O15018 2839 aa16.84■□□□□ 0.29
LDB1-201ENST00000361198 TRAV12-1A0A0B4J245 112 aa16.84■□□□□ 0.29
LDB1-201ENST00000361198 IGKV3-20P01619 116 aa16.84■□□□□ 0.29
LDB1-201ENST00000361198 SUMO2P61956 95 aaKnown RBP16.84■□□□□ 0.29
LDB1-201ENST00000361198 KMT2BQ9UMN6 2715 aaPredicted RBP16.83■□□□□ 0.29
LDB1-201ENST00000361198 TRAV12-3A0A0B4J271 114 aa16.83■□□□□ 0.28
LDB1-201ENST00000361198 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.83■□□□□ 0.28
LDB1-201ENST00000361198 PLNP26678 52 aa16.83■□□□□ 0.28
LDB1-201ENST00000361198 FXYD2P54710 66 aa16.83■□□□□ 0.28
LDB1-201ENST00000361198 ORMDL2Q53FV1 153 aa16.83■□□□□ 0.28
LDB1-201ENST00000361198 TCTEX1D4Q5JR98 221 aa16.83■□□□□ 0.28
LDB1-201ENST00000361198 C14orf178Q8N769 122 aaPredicted RBP16.83■□□□□ 0.28
LDB1-201ENST00000361198 A0A1W2PPM0 123 aa16.82■□□□□ 0.28
LDB1-201ENST00000361198 FAM159AQ6UWV7 190 aa16.82■□□□□ 0.28
LDB1-201ENST00000361198 RAB37Q96AX2 223 aa16.82■□□□□ 0.28
LDB1-201ENST00000361198 TM2D2Q9BX73 214 aa16.82■□□□□ 0.28
LDB1-201ENST00000361198 NF1P21359 2839 aa16.82■□□□□ 0.28
LDB1-201ENST00000361198 ITPR2Q14571 2701 aa16.82■□□□□ 0.28
LDB1-201ENST00000361198 SMIM13P0DJ93 91 aa16.82■□□□□ 0.28
LDB1-201ENST00000361198 PLA2G2AP14555 144 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 GCSHP23434 173 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 RNF151Q2KHN1 245 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 TOMM6Q96B49 74 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 NAA38Q9BRA0 125 aaKnown RBP16.81■□□□□ 0.28
LDB1-201ENST00000361198 ACANP16112 2415 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 HIST2H2BDQ6DRA6 164 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 OR11H1Q8NG94 326 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 DUX3Q96PT4 197 aa16.81■□□□□ 0.28
LDB1-201ENST00000361198 TRAV12-2A0A075B6T6 113 aa16.8■□□□□ 0.28
LDB1-201ENST00000361198 ODF3Q96PU9 254 aa16.8■□□□□ 0.28
LDB1-201ENST00000361198 F8VRH5 84 aa16.8■□□□□ 0.28
LDB1-201ENST00000361198 TMEM86BQ8N661 226 aa16.8■□□□□ 0.28
LDB1-201ENST00000361198 LINC01619G3V211 115 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 H7C1H1 209 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 K7ERU9 68 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 KHDC1LQ5JSQ8 128 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 Q6ZSV7 163 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 CEND1Q8N111 149 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 POM121L12Q8N7R1 296 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 MAPKAPK5-AS1Q8N8E1 139 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 OR5A1Q8NGJ0 315 aa16.79■□□□□ 0.28
LDB1-201ENST00000361198 CD7P09564 240 aa16.78■□□□□ 0.28
LDB1-201ENST00000361198 PHLDA1Q8WV24 401 aaPredicted RBP16.78■□□□□ 0.28
LDB1-201ENST00000361198 J3QKU1 62 aa16.77■□□□□ 0.28
LDB1-201ENST00000361198 NXPH4O95158 308 aa16.77■□□□□ 0.28
LDB1-201ENST00000361198 C4orf3Q8WVX3 66 aa16.77■□□□□ 0.28
LDB1-201ENST00000361198 RPL39LQ96EH5 51 aaKnown RBP16.77■□□□□ 0.28
LDB1-201ENST00000361198 DNAJC9-AS1A6NH13 148 aa16.77■□□□□ 0.27
LDB1-201ENST00000361198 TAL2Q16559 108 aa16.77■□□□□ 0.27
LDB1-201ENST00000361198 C21orf62-AS1Q17RA5 79 aa16.77■□□□□ 0.27
LDB1-201ENST00000361198 SPINK13Q1W4C9 94 aa16.77■□□□□ 0.27
LDB1-201ENST00000361198 NEXN-AS1Q8NBZ9 246 aa16.77■□□□□ 0.27
LDB1-201ENST00000361198 SCGB3A1Q96QR1 104 aa16.77■□□□□ 0.27
LDB1-201ENST00000361198 SPCS1Q9Y6A9 102 aa16.77■□□□□ 0.27
LDB1-201ENST00000361198 PPP1R17O96001 155 aa16.76■□□□□ 0.27
LDB1-201ENST00000361198 MGPP08493 103 aa16.76■□□□□ 0.27
LDB1-201ENST00000361198 SAMD5Q5TGI4 173 aa16.76■□□□□ 0.27
LDB1-201ENST00000361198 TEX29Q8N6K0 151 aa16.76■□□□□ 0.27
LDB1-201ENST00000361198 FABP2P12104 132 aa16.76■□□□□ 0.27
LDB1-201ENST00000361198 FOXI2Q6ZQN5 318 aa16.75■□□□□ 0.27
LDB1-201ENST00000361198 KLHL30-AS1Q8NEE0 82 aa16.74■□□□□ 0.27
LDB1-201ENST00000361198 JPT2Q9H910 190 aa16.74■□□□□ 0.27
LDB1-201ENST00000361198 ESM1Q9NQ30 184 aa16.74■□□□□ 0.27
LDB1-201ENST00000361198 CHTOPQ9Y3Y2 248 aaKnown RBP16.74■□□□□ 0.27
LDB1-201ENST00000361198 KIF25-AS1Q9Y6Z4 181 aa16.74■□□□□ 0.27
LDB1-201ENST00000361198 DUSP14O95147 198 aaKnown RBP16.73■□□□□ 0.27
LDB1-201ENST00000361198 KRTAP1-1Q07627 177 aa16.73■□□□□ 0.27
LDB1-201ENST00000361198 DLX4Q92988 240 aaPredicted RBP16.73■□□□□ 0.27
LDB1-201ENST00000361198 VPS25Q9BRG1 176 aa16.73■□□□□ 0.27
LDB1-201ENST00000361198 LINC00315P59091 139 aa16.73■□□□□ 0.27
LDB1-201ENST00000361198 AMTNQ6UX39 209 aa16.73■□□□□ 0.27
LDB1-201ENST00000361198 C2orf66Q6UXQ4 117 aa16.73■□□□□ 0.27
LDB1-201ENST00000361198 NEGR1Q7Z3B1 354 aa16.72■□□□□ 0.27
LDB1-201ENST00000361198 PEMTQ9UBM1 199 aa16.72■□□□□ 0.27
LDB1-201ENST00000361198 MDFICQ9P1T7 246 aa16.72■□□□□ 0.27
LDB1-201ENST00000361198 UNC79Q9P2D8 2635 aa16.72■□□□□ 0.27
LDB1-201ENST00000361198 IGHV3-16A0A0C4DH30 117 aa16.71■□□□□ 0.27
LDB1-201ENST00000361198 RPL32P62910 135 aaKnown RBP16.71■□□□□ 0.27
LDB1-201ENST00000361198 TMEM61Q8N0U2 210 aa16.71■□□□□ 0.27
LDB1-201ENST00000361198 Q8N1Y9 231 aa16.71■□□□□ 0.27
LDB1-201ENST00000361198 MTORP42345 2549 aa16.71■□□□□ 0.27
LDB1-201ENST00000361198 K7ERJ3 54 aa16.71■□□□□ 0.27
LDB1-201ENST00000361198 SAP30O75446 220 aa16.71■□□□□ 0.27
LDB1-201ENST00000361198 BAALCQ8WXS3 180 aa16.71■□□□□ 0.27
LDB1-201ENST00000361198 NHP2Q9NX24 153 aaKnown RBP16.71■□□□□ 0.27
LDB1-201ENST00000361198 ANK3Q12955 4377 aaKnown RBP16.71■□□□□ 0.26
LDB1-201ENST00000361198 KNCNA6PVL3 124 aa16.7■□□□□ 0.26
LDB1-201ENST00000361198 DEFB131AP59861 70 aa16.7■□□□□ 0.26
LDB1-201ENST00000361198 SETD2Q9BYW2 2564 aaPredicted RBP16.7■□□□□ 0.26
LDB1-201ENST00000361198 C9orf85Q96MD7 179 aa16.7■□□□□ 0.26
LDB1-201ENST00000361198 CSTL1Q9H114 145 aa16.7■□□□□ 0.26
LDB1-201ENST00000361198 IGHV1OR15-1A0A075B7D0 117 aa16.69■□□□□ 0.26
LDB1-201ENST00000361198 WNK1Q9H4A3 2382 aa16.69■□□□□ 0.26
LDB1-201ENST00000361198 OR11H12B2RN74 326 aa16.68■□□□□ 0.26
LDB1-201ENST00000361198 OR11H2Q8NH07 326 aa16.68■□□□□ 0.26
LDB1-201ENST00000361198 A0A087WWL8 130 aa16.68■□□□□ 0.26
LDB1-201ENST00000361198 MYMXA0A1B0GTQ4 84 aa16.68■□□□□ 0.26
LDB1-201ENST00000361198 C11orf44Q8N8P7 122 aa16.68■□□□□ 0.26
LDB1-201ENST00000361198 TRBV7-3A0A075B6L6 115 aa16.67■□□□□ 0.26
LDB1-201ENST00000361198 PRSS29PA6NIE9 313 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms