RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SAMD10Q9BYL1 202 aa16.73■□□□□ 0.27
SDF4-202ENST00000360001 ZMAT5Q9UDW3 170 aaKnown RBP16.73■□□□□ 0.27
SDF4-202ENST00000360001 NPYP01303 97 aa16.72■□□□□ 0.27
SDF4-202ENST00000360001 GATA1P15976 413 aaPredicted RBP16.72■□□□□ 0.27
SDF4-202ENST00000360001 APOC4P55056 127 aa16.72■□□□□ 0.27
SDF4-202ENST00000360001 PIK3CD-AS1Q5SR53 167 aa16.72■□□□□ 0.27
SDF4-202ENST00000360001 SAMD5Q5TGI4 173 aa16.72■□□□□ 0.27
SDF4-202ENST00000360001 LURAP1LQ8IV03 231 aa16.72■□□□□ 0.27
SDF4-202ENST00000360001 CRYGDP07320 174 aa16.71■□□□□ 0.27
SDF4-202ENST00000360001 SMIM17P0DL12 118 aa16.71■□□□□ 0.27
SDF4-202ENST00000360001 MRAP2Q96G30 205 aa16.71■□□□□ 0.27
SDF4-202ENST00000360001 URB1-AS1Q96HZ7 61 aa16.71■□□□□ 0.27
SDF4-202ENST00000360001 MGPP08493 103 aa16.71■□□□□ 0.27
SDF4-202ENST00000360001 PLAC8L1A1L4L8 177 aa16.7■□□□□ 0.26
SDF4-202ENST00000360001 RRN3P1Q2M238 152 aa16.7■□□□□ 0.26
SDF4-202ENST00000360001 C16orf74Q96GX8 76 aa16.7■□□□□ 0.26
SDF4-202ENST00000360001 S100A2P29034 98 aa16.69■□□□□ 0.26
SDF4-202ENST00000360001 NIT1Q86X76 327 aa16.69■□□□□ 0.26
SDF4-202ENST00000360001 HIST1H2BLQ99880 126 aa16.69■□□□□ 0.26
SDF4-202ENST00000360001 MRPL16Q9NX20 251 aaKnown RBP16.69■□□□□ 0.26
SDF4-202ENST00000360001 LAMTOR2Q9Y2Q5 125 aa16.69■□□□□ 0.26
SDF4-202ENST00000360001 NRACQ8N912 160 aa16.69■□□□□ 0.26
SDF4-202ENST00000360001 TNFRSF6BO95407 300 aa16.68■□□□□ 0.26
SDF4-202ENST00000360001 FAM74A4Q5TZK3 123 aa16.68■□□□□ 0.26
SDF4-202ENST00000360001 RASL10AQ92737 203 aa16.68■□□□□ 0.26
SDF4-202ENST00000360001 FABP4P15090 132 aa16.67■□□□□ 0.26
SDF4-202ENST00000360001 RNASEKQ6P5S7 137 aaKnown RBP16.67■□□□□ 0.26
SDF4-202ENST00000360001 X6R8D5 127 aa16.67■□□□□ 0.26
SDF4-202ENST00000360001 NBEAL2Q6ZNJ1 2754 aa16.66■□□□□ 0.26
SDF4-202ENST00000360001 DAZ2Q13117 558 aaKnown RBP16.66■□□□□ 0.26
SDF4-202ENST00000360001 LOC389332A0A1B0GUA5 103 aa16.66■□□□□ 0.26
SDF4-202ENST00000360001 A8MWV9 139 aa16.66■□□□□ 0.26
SDF4-202ENST00000360001 DEFB135Q30KP9 77 aa16.66■□□□□ 0.26
SDF4-202ENST00000360001 NDUFAF3Q9BU61 184 aa16.66■□□□□ 0.26
SDF4-202ENST00000360001 NACAE9PAV3 2078 aa16.65■□□□□ 0.26
SDF4-202ENST00000360001 LINC00614P0C842 121 aa16.65■□□□□ 0.26
SDF4-202ENST00000360001 IFI27P40305 119 aaPredicted RBP16.65■□□□□ 0.26
SDF4-202ENST00000360001 AKR1D1P51857 326 aa16.65■□□□□ 0.26
SDF4-202ENST00000360001 SUMO4Q6EEV6 95 aa16.65■□□□□ 0.26
SDF4-202ENST00000360001 NOP10Q9NPE3 64 aaKnown RBP16.65■□□□□ 0.26
SDF4-202ENST00000360001 A8MZ25 164 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 CFAP126Q5VTH2 177 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 UFSP1Q6NVU6 142 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 TMEM18Q96B42 140 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 MAP1LC3AQ9H492 121 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 TRGV1A0A0A0MS02 117 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 F5H697 171 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 PRSS3P2Q8NHM4 247 aa16.64■□□□□ 0.25
SDF4-202ENST00000360001 CHCHD1Q96BP2 118 aaKnown RBP16.64■□□□□ 0.25
SDF4-202ENST00000360001 NOTCH1P46531 2555 aa16.63■□□□□ 0.25
SDF4-202ENST00000360001 ZNF56Q15929 161 aa16.63■□□□□ 0.25
SDF4-202ENST00000360001 LGALS9BQ3B8N2 356 aa16.63■□□□□ 0.25
SDF4-202ENST00000360001 Q6ZTI0 123 aa16.63■□□□□ 0.25
SDF4-202ENST00000360001 RPL39LQ96EH5 51 aaKnown RBP16.63■□□□□ 0.25
SDF4-202ENST00000360001 SMIM9A6NGZ8 99 aa16.62■□□□□ 0.25
SDF4-202ENST00000360001 RS1O15537 224 aa16.62■□□□□ 0.25
SDF4-202ENST00000360001 OVOL2Q9BRP0 275 aa16.62■□□□□ 0.25
SDF4-202ENST00000360001 HSBP1O75506 76 aa16.62■□□□□ 0.25
SDF4-202ENST00000360001 NBEAL1Q6ZS30 2694 aa16.61■□□□□ 0.25
SDF4-202ENST00000360001 PRSS47A8MTI9 375 aa16.61■□□□□ 0.25
SDF4-202ENST00000360001 PMCHP20382 165 aa16.61■□□□□ 0.25
SDF4-202ENST00000360001 FAM19A2Q8N3H0 131 aa16.61■□□□□ 0.25
SDF4-202ENST00000360001 FA2HQ7L5A8 372 aa16.6■□□□□ 0.25
SDF4-202ENST00000360001 PACRGQ96M98 296 aaPredicted RBP16.6■□□□□ 0.25
SDF4-202ENST00000360001 IGHV3-73A0A0B4J1V6 119 aa16.6■□□□□ 0.25
SDF4-202ENST00000360001 AMTP48728 403 aa16.6■□□□□ 0.25
SDF4-202ENST00000360001 Q6ZWC4 215 aa16.6■□□□□ 0.25
SDF4-202ENST00000360001 OR10D4PQ8NGN7 298 aa16.6■□□□□ 0.25
SDF4-202ENST00000360001 AP5S1Q9NUS5 200 aa16.6■□□□□ 0.25
SDF4-202ENST00000360001 M0QY20 66 aa16.59■□□□□ 0.25
SDF4-202ENST00000360001 IGLV2-18A0A075B6J9 118 aa16.58■□□□□ 0.25
SDF4-202ENST00000360001 OR11H2Q8NH07 326 aa16.58■□□□□ 0.25
SDF4-202ENST00000360001 RNF183Q96D59 192 aa16.58■□□□□ 0.25
SDF4-202ENST00000360001 MGAM2Q2M2H8 2515 aa16.58■□□□□ 0.25
SDF4-202ENST00000360001 RHODO00212 210 aa16.58■□□□□ 0.24
SDF4-202ENST00000360001 PPP1R17O96001 155 aa16.58■□□□□ 0.24
SDF4-202ENST00000360001 C20orf78Q9BR46 151 aa16.58■□□□□ 0.24
SDF4-202ENST00000360001 EMP1P54849 157 aa16.57■□□□□ 0.24
SDF4-202ENST00000360001 SUMO2P61956 95 aaKnown RBP16.57■□□□□ 0.24
SDF4-202ENST00000360001 PMCHL1Q16048 86 aa16.57■□□□□ 0.24
SDF4-202ENST00000360001 NXT2Q9NPJ8 142 aaKnown RBP16.57■□□□□ 0.24
SDF4-202ENST00000360001 IGHV1-24A0A0C4DH33 117 aa16.57■□□□□ 0.24
SDF4-202ENST00000360001 LINC01546A6NGU7 62 aa16.57■□□□□ 0.24
SDF4-202ENST00000360001 Q8N8P6 123 aa16.57■□□□□ 0.24
SDF4-202ENST00000360001 EDA2RQ9HAV5 297 aa16.57■□□□□ 0.24
SDF4-202ENST00000360001 ZFP2Q6ZN57 461 aa16.56■□□□□ 0.24
SDF4-202ENST00000360001 Q6ZSN1 163 aa16.56■□□□□ 0.24
SDF4-202ENST00000360001 OR4C5Q8NGB2 326 aa16.56■□□□□ 0.24
SDF4-202ENST00000360001 GAGE12BA1L429 117 aa16.55■□□□□ 0.24
SDF4-202ENST00000360001 GAGE7O76087 117 aa16.55■□□□□ 0.24
SDF4-202ENST00000360001 GAGE12FP0CL80 117 aa16.55■□□□□ 0.24
SDF4-202ENST00000360001 GAGE12GP0CL81 117 aa16.55■□□□□ 0.24
SDF4-202ENST00000360001 GAGE12IP0CL82 117 aa16.55■□□□□ 0.24
SDF4-202ENST00000360001 SMIM2Q9BVW6 85 aa16.55■□□□□ 0.24
SDF4-202ENST00000360001 TRAV4A0A0B4J268 109 aa16.55■□□□□ 0.24
SDF4-202ENST00000360001 KPRPQ5T749 579 aaPredicted RBP16.55■□□□□ 0.24
SDF4-202ENST00000360001 ZNF479Q96JC4 524 aa16.54■□□□□ 0.24
SDF4-202ENST00000360001 TRBV6-5A0A0K0K1A5 114 aa16.53■□□□□ 0.24
SDF4-202ENST00000360001 IGHV4-28A0A0C4DH34 117 aa16.53■□□□□ 0.24
SDF4-202ENST00000360001 ST20Q9HBF5 79 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms