RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 CCL25O15444 150 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 NPYP01303 97 aa7.63□□□□□ -1.19
CHD3-202ENST00000358181 IGLV3-32A0A0A0MS00 114 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 J3QRE1 110 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 K7EM74 188 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 DAZ2Q13117 558 aaKnown RBP7.62□□□□□ -1.19
CHD3-202ENST00000358181 DAZ4Q86SG3 579 aaKnown RBP7.62□□□□□ -1.19
CHD3-202ENST00000358181 CIRBP-AS1Q8TBR5 109 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 DCANP1Q8TF63 244 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 DAZ3Q9NR90 486 aaKnown RBP7.62□□□□□ -1.19
CHD3-202ENST00000358181 KIF26AQ9ULI4 1882 aaPredicted RBP7.62□□□□□ -1.19
CHD3-202ENST00000358181 TRAV23DV6A0A075B6W5 121 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 NUPR2A6NF83 97 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 B5MCH6 92 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 ACACAQ13085 2346 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 ABCA4P78363 2273 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 PYGO2Q9BRQ0 406 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 TRBV19A0A075B6N1 114 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 IGLC2P0DOY2 106 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 IGLC3P0DOY3 106 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 Q0VG73 95 aa7.62□□□□□ -1.19
CHD3-202ENST00000358181 FGF23Q9GZV9 251 aaPredicted RBP7.62□□□□□ -1.19
CHD3-202ENST00000358181 VOPP1Q96AW1 172 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 FSHBP01225 129 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 Q6ZS92 163 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 CLEC2BQ92478 149 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 PDE6HQ13956 83 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 A0A0B4J2C4 111 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 C9orf118A6NHY6 69 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 BPY2O14599 106 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 LINC00269Q8N2A0 174 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 XAGE1AQ9HD64 81 aa7.61□□□□□ -1.19
CHD3-202ENST00000358181 H3BRN7 92 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 LGALS9O00182 355 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 LYL1P12980 280 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 GFRA4Q9GZZ7 299 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 ZNF503-AS2A6NEH8 195 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 C15orf62A8K5M9 175 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 IGF1P05019 195 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 Q6P435 159 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 BLCAPP62952 87 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 CDPF1Q6NVV7 123 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 CYYR1Q96J86 154 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 ADAMTS9Q9P2N4 1935 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 FAM236AA0A1B0GUQ0 79 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 FAM236BA0A1B0GV22 79 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 PKDREJQ9NTG1 2253 aa7.6□□□□□ -1.19
CHD3-202ENST00000358181 IGKV2-28A0A075B6P5 120 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 IGKV2D-28P01615 120 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 CFC1BP0CG36 223 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 CFC1P0CG37 223 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 ZNF524Q96C55 264 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 SPANXCQ9NY87 97 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 TANC2Q9HCD6 1990 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 YPEL3P61236 119 aaPredicted RBP7.59□□□□□ -1.19
CHD3-202ENST00000358181 LHFPL1Q86WI0 220 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 WFDC13Q8IUB5 93 aa7.59□□□□□ -1.19
CHD3-202ENST00000358181 KIAA1671Q9BY89 1806 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 F8W1H4 67 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 C3orf84H3BNL1 204 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 IGHV2-5P01817 119 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 JMJD7-PLA2G4BH0Y9G9 81 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 C20orf144Q9BQM9 153 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 POLR3KQ9Y2Y1 108 aaPredicted RBP7.58□□□□□ -1.2
CHD3-202ENST00000358181 RPL37AP8A6NKH3 93 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 CRYGBP07316 175 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 U3KQA8 63 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 PCNX1Q96RV3 2341 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 A6NED7 52 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 K7EP13 123 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 IGLV2-14P01704 120 aa7.58□□□□□ -1.2
CHD3-202ENST00000358181 C17orf82Q86X59 251 aaPredicted RBP7.58□□□□□ -1.2
CHD3-202ENST00000358181 NOTCH4Q99466 2003 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 LINC00482Q8N8I6 264 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 RNASE8Q8TDE3 154 aaKnown RBP7.57□□□□□ -1.2
CHD3-202ENST00000358181 KAAG1Q9UBP8 84 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 ADCYAP1P18509 176 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 RLFQ13129 1914 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 C12orf74Q32Q52 190 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 C1orf158Q8N1D5 194 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 MIR7-3HGQ8N6C7 128 aa7.57□□□□□ -1.2
CHD3-202ENST00000358181 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 ZNF833PQ6ZTB9 187 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 DNAJC9-AS1A6NH13 148 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 TRBV24-1A0A075B6N3 115 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 F8VRH5 84 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 MPZP25189 248 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 SIP14410 1827 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 WT1P19544 449 aaPredicted RBP7.56□□□□□ -1.2
CHD3-202ENST00000358181 DEFB1P60022 68 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 C4orf3Q8WVX3 66 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 TMEM89A2RUT3 159 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
CHD3-202ENST00000358181 ZGRF1Q86YA3 2104 aa7.56□□□□□ -1.2
CHD3-202ENST00000358181 MED14OSP0DP75 135 aa7.55□□□□□ -1.2
CHD3-202ENST00000358181 Q6ZRM9 215 aa7.55□□□□□ -1.2
CHD3-202ENST00000358181 PLAC8L1A1L4L8 177 aa7.55□□□□□ -1.2
CHD3-202ENST00000358181 SPRNQ5BIV9 151 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms