RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RLFQ13129 1914 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 CXCL5P42830 114 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 TRIOBPQ9H2D6 2365 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 P0DMU3 169 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 FAM231AP0DMU4 169 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 FAM231CP0DMU5 169 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 RITA1Q96K30 269 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 CENPVL3A0A0U1RRI6 287 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 HIGD2BQ4VC39 106 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 PRSS33Q8NF86 280 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 A0A096LPF7 62 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 NFE4Q86UQ8 179 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 IMUPQ9GZP8 106 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 A0A0J9YXY3 114 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 CHKB-CPT1BH3BT56 60 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 MLST8Q9BVC4 326 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 BRWD3Q6RI45 1802 aa9.79□□□□□ -0.84
SYNCRIP-201ENST00000355238 HIST2H2BDQ6DRA6 164 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 GVINP1Q7Z2Y8 2422 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 IGHV4-4A0A075B6R2 117 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 ZNF407Q9C0G0 2248 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 PKDREJQ9NTG1 2253 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 GNLYP22749 145 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 FAM215AQ9Y5M1 114 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 MRPL55Q7Z7F7 128 aaKnown RBP9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 NDUFB1O75438 58 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 C16orf74Q96GX8 76 aa9.78□□□□□ -0.84
SYNCRIP-201ENST00000355238 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.84
SYNCRIP-201ENST00000355238 UBE2BP63146 152 aa9.77□□□□□ -0.84
SYNCRIP-201ENST00000355238 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.84
SYNCRIP-201ENST00000355238 FAM240AA0A1B0GVK7 77 aa9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 LINC00322Q6ZN03 302 aaPredicted RBP9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 SVIPQ8NHG7 77 aa9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 Q9HAA7 133 aa9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 WDR81Q562E7 1941 aa9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 NDUFA7O95182 113 aa9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 NEXN-AS1Q8NBZ9 246 aa9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 EP300Q09472 2414 aaPredicted RBP9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 V9GYY9 64 aa9.77□□□□□ -0.85
SYNCRIP-201ENST00000355238 Q6ZQT7 251 aa9.76□□□□□ -0.85
SYNCRIP-201ENST00000355238 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
SYNCRIP-201ENST00000355238 IGKV1D-37A0A075B6S9 117 aa9.76□□□□□ -0.85
SYNCRIP-201ENST00000355238 DIRC1Q969H9 104 aa9.76□□□□□ -0.85
SYNCRIP-201ENST00000355238 TP73-AS1Q9UF72 201 aa9.76□□□□□ -0.85
SYNCRIP-201ENST00000355238 CAMK2N2Q96S95 79 aa9.76□□□□□ -0.85
SYNCRIP-201ENST00000355238 PRB2P02812 416 aaPredicted RBP9.75□□□□□ -0.85
SYNCRIP-201ENST00000355238 SPRNQ5BIV9 151 aa9.75□□□□□ -0.85
SYNCRIP-201ENST00000355238 SDIM1Q6ZPB5 146 aa9.75□□□□□ -0.85
SYNCRIP-201ENST00000355238 ZNF295-AS1Q8N0V1 137 aa9.75□□□□□ -0.85
SYNCRIP-201ENST00000355238 AJUBAQ96IF1 538 aa9.75□□□□□ -0.85
SYNCRIP-201ENST00000355238 PROP1O75360 226 aa9.75□□□□□ -0.85
SYNCRIP-201ENST00000355238 K7EMT4 169 aa9.74□□□□□ -0.85
SYNCRIP-201ENST00000355238 ATP5EP56381 51 aaPredicted RBP9.74□□□□□ -0.85
SYNCRIP-201ENST00000355238 A0A0J9YY99 117 aa9.74□□□□□ -0.85
SYNCRIP-201ENST00000355238 E7EUB6 86 aa9.74□□□□□ -0.85
SYNCRIP-201ENST00000355238 NCR3O14931 201 aa9.74□□□□□ -0.85
SYNCRIP-201ENST00000355238 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
SYNCRIP-201ENST00000355238 C2orf91Q6ZV80 131 aa9.74□□□□□ -0.85
SYNCRIP-201ENST00000355238 DOCK7Q96N67 2140 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 NACAE9PAV3 2078 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 U3KQK5 164 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 Q8N9W7 124 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 OBSL1O75147 1896 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 IGKV2D-24A0A075B6R9 120 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 GYPEP15421 78 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 CLPSL1A2RUU4 121 aa9.73□□□□□ -0.85
SYNCRIP-201ENST00000355238 IGKV2D-26A0A0A0MRZ7 120 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 CFAP126Q5VTH2 177 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 PRR30Q53SZ7 412 aaPredicted RBP9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 MAPKAPK5-AS1Q8N8E1 139 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 MGAMO43451 1857 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 LRRC75A-AS1Q8N1F1 130 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 SERP2Q8N6R1 65 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 PKIGQ9Y2B9 76 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 NDUFA1O15239 70 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 THSD7BQ9C0I4 1608 aa9.72□□□□□ -0.85
SYNCRIP-201ENST00000355238 TRIAP1O43715 76 aa9.71□□□□□ -0.85
SYNCRIP-201ENST00000355238 IGHV3-33P01772 117 aa9.71□□□□□ -0.85
SYNCRIP-201ENST00000355238 NDUFC1O43677 76 aa9.71□□□□□ -0.85
SYNCRIP-201ENST00000355238 IGLV1-47P01700 117 aa9.71□□□□□ -0.85
SYNCRIP-201ENST00000355238 MPLKIPQ8TAP9 179 aa9.71□□□□□ -0.85
SYNCRIP-201ENST00000355238 VPREB3Q9UKI3 123 aa9.71□□□□□ -0.86
SYNCRIP-201ENST00000355238 TMEM223A0PJW6 202 aa9.71□□□□□ -0.86
SYNCRIP-201ENST00000355238 MRPS12O15235 138 aaKnown RBP9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 WT1P19544 449 aaPredicted RBP9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 DEFB121Q5J5C9 76 aa9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 MALRD1Q5VYJ5 2156 aa9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 SPTAN1Q13813 2472 aaKnown RBP9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 COL4A6Q14031 1691 aa9.7□□□□□ -0.86
SYNCRIP-201ENST00000355238 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms