RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 HNRNPA3P51991 378 aaKnown RBP8.24□□□□□ -1.09
SVIP-201ENST00000354193 ST20Q9HBF5 79 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 TNFRSF18Q9Y5U5 241 aa8.24□□□□□ -1.09
SVIP-201ENST00000354193 PKIAP61925 76 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 ODF3L2Q3SX64 289 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 DDTP30046 118 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 HLA-DRB4P13762 266 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 PROK1P58294 105 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 NOP10Q9NPE3 64 aaKnown RBP8.23□□□□□ -1.09
SVIP-201ENST00000354193 HLA-DRB4X5D2U9 266 aa8.23□□□□□ -1.09
SVIP-201ENST00000354193 P0DMU3 169 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 FAM231AP0DMU4 169 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 FAM231CP0DMU5 169 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 CRLF1O75462 422 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 ZNF415Q09FC8 603 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 ARL6IP6Q8N6S5 226 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 GOLT1BQ9Y3E0 138 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 SUMO2P61956 95 aaKnown RBP8.22□□□□□ -1.09
SVIP-201ENST00000354193 OR4C5Q8NGB2 326 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
SVIP-201ENST00000354193 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
SVIP-201ENST00000354193 IGLL1P15814 213 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 C12orf54Q6X4T0 127 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 ZNF580Q9UK33 172 aa8.22□□□□□ -1.09
SVIP-201ENST00000354193 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.09
SVIP-201ENST00000354193 Q8N2B8 174 aa8.21□□□□□ -1.09
SVIP-201ENST00000354193 VWFP04275 2813 aa8.21□□□□□ -1.09
SVIP-201ENST00000354193 SDHAF1A6NFY7 115 aa8.21□□□□□ -1.1
SVIP-201ENST00000354193 SYS1-DBNDD2H3BUS1 97 aa8.21□□□□□ -1.1
SVIP-201ENST00000354193 BRI3O95415 125 aa8.21□□□□□ -1.1
SVIP-201ENST00000354193 STPG4Q8N801 248 aa8.21□□□□□ -1.1
SVIP-201ENST00000354193 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
SVIP-201ENST00000354193 TRAV8-6A0A0B4J262 113 aa8.2□□□□□ -1.1
SVIP-201ENST00000354193 TRGV4A0A0C4DH28 118 aa8.2□□□□□ -1.1
SVIP-201ENST00000354193 CTAG1AP78358 180 aa8.2□□□□□ -1.1
SVIP-201ENST00000354193 LAGE3Q14657 143 aa8.2□□□□□ -1.1
SVIP-201ENST00000354193 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
SVIP-201ENST00000354193 A0A096LPF7 62 aa8.19□□□□□ -1.1
SVIP-201ENST00000354193 AZU1P20160 251 aa8.19□□□□□ -1.1
SVIP-201ENST00000354193 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
SVIP-201ENST00000354193 DEFB135Q30KP9 77 aa8.19□□□□□ -1.1
SVIP-201ENST00000354193 TP73-AS1Q9UF72 201 aa8.19□□□□□ -1.1
SVIP-201ENST00000354193 PRB2P02812 416 aaPredicted RBP8.19□□□□□ -1.1
SVIP-201ENST00000354193 KLLNB2CW77 178 aa8.19□□□□□ -1.1
SVIP-201ENST00000354193 GATD1Q8NB37 220 aa8.19□□□□□ -1.1
SVIP-201ENST00000354193 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
SVIP-201ENST00000354193 IGHV3-64A0A075B6Q5 118 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 RBMY1BA6NDE4 496 aaKnown RBP8.18□□□□□ -1.1
SVIP-201ENST00000354193 RBMY1EA6NEQ0 496 aaKnown RBP8.18□□□□□ -1.1
SVIP-201ENST00000354193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.18□□□□□ -1.1
SVIP-201ENST00000354193 RBMY1DP0C7P1 496 aaKnown RBP8.18□□□□□ -1.1
SVIP-201ENST00000354193 DEFB121Q5J5C9 76 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 RNF185Q96GF1 192 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 SMIM2Q9BVW6 85 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 GAGE12JA6NER3 117 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 GAGE1Q13065 139 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 GAGE4Q13068 117 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 GAGE5Q13069 117 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 GAGE13Q4V321 117 aa8.18□□□□□ -1.1
SVIP-201ENST00000354193 ZC2HC1BQ5TFG8 222 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 URB1-AS1Q96HZ7 61 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 KLK9Q2XQG4 91 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 NDUFA11Q86Y39 141 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 RNF152Q8N8N0 203 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 DKK2Q9UBU2 259 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
SVIP-201ENST00000354193 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 C2orf66Q6UXQ4 117 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
SVIP-201ENST00000354193 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
SVIP-201ENST00000354193 Q6ZTI0 123 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 ZNRF2Q8NHG8 242 aa8.17□□□□□ -1.1
SVIP-201ENST00000354193 ERASQ7Z444 233 aa8.16□□□□□ -1.1
SVIP-201ENST00000354193 MRAPQ8TCY5 172 aa8.16□□□□□ -1.1
SVIP-201ENST00000354193 TP53TG1Q9Y2A0 90 aa8.16□□□□□ -1.1
SVIP-201ENST00000354193 H7C1H1 209 aa8.16□□□□□ -1.1
SVIP-201ENST00000354193 ZNF493Q6ZR52 646 aa8.16□□□□□ -1.1
SVIP-201ENST00000354193 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
SVIP-201ENST00000354193 CYSLTR1Q9Y271 337 aa8.16□□□□□ -1.1
SVIP-201ENST00000354193 M0R2P5 195 aa8.15□□□□□ -1.1
SVIP-201ENST00000354193 KRTAP10-3P60369 221 aa8.15□□□□□ -1.1
SVIP-201ENST00000354193 Q8N8P6 123 aa8.15□□□□□ -1.1
SVIP-201ENST00000354193 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
SVIP-201ENST00000354193 C1QTNF4Q9BXJ3 329 aa8.15□□□□□ -1.1
SVIP-201ENST00000354193 RASL10AQ92737 203 aa8.15□□□□□ -1.1
SVIP-201ENST00000354193 MRAP2Q96G30 205 aa8.15□□□□□ -1.1
SVIP-201ENST00000354193 TRAV9-2A0A087WT02 112 aa8.15□□□□□ -1.11
SVIP-201ENST00000354193 VCYO14598 125 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 C9orf66Q5T8R8 295 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 TMEM262E9PQX1 116 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 ORMDL2Q53FV1 153 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 TTTY13Q9BZ97 58 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 C16orf95Q9H693 158 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 ATP5LO75964 103 aa8.14□□□□□ -1.11
SVIP-201ENST00000354193 AMTNQ6UX39 209 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms