RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 SPANXB1Q9NS25 103 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF1-202ENST00000347545 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
ARHGEF1-202ENST00000347545 DOPEY1Q5JWR5 2465 aa10.82□□□□□ -0.68
ARHGEF1-202ENST00000347545 POLR2KP53803 58 aaKnown RBP10.82□□□□□ -0.68
ARHGEF1-202ENST00000347545 C12orf74Q32Q52 190 aa10.82□□□□□ -0.68
ARHGEF1-202ENST00000347545 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 B4DSR2 109 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 CKS1BP61024 79 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 FAM159AQ6UWV7 190 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 CSPG4Q6UVK1 2322 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 A0A1B0GV72 72 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 OR11H12B2RN74 326 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 ZNF688P0C7X2 276 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 OR11H1Q8NG94 326 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 OR11H2Q8NH07 326 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 LINC01619G3V211 115 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 CD7P09564 240 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 COX6B1P14854 86 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 RPL32P62910 135 aaKnown RBP10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 HIST1H4GQ99525 98 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
ARHGEF1-202ENST00000347545 TRAV12-2A0A075B6T6 113 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 TRAV26-1A0A087WT03 109 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 RPL39P62891 51 aaKnown RBP10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 MORN3Q6PF18 240 aaPredicted RBP10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 ZFP2Q6ZN57 461 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 C9orf85Q96MD7 179 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 MDFICQ9P1T7 246 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 TP53TG1Q9Y2A0 90 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 IGHV3-16A0A0C4DH30 117 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 ID1P41134 155 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 PLEKHB2Q96CS7 222 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
ARHGEF1-202ENST00000347545 A0A096LNT2 108 aa10.79□□□□□ -0.68
ARHGEF1-202ENST00000347545 PPP1R17O96001 155 aa10.79□□□□□ -0.68
ARHGEF1-202ENST00000347545 IGKV3-20P01619 116 aa10.79□□□□□ -0.68
ARHGEF1-202ENST00000347545 PIEZO1Q92508 2521 aa10.79□□□□□ -0.68
ARHGEF1-202ENST00000347545 A0A0J9YX75 114 aa10.79□□□□□ -0.68
ARHGEF1-202ENST00000347545 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
ARHGEF1-202ENST00000347545 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
ARHGEF1-202ENST00000347545 EMP1P54849 157 aa10.78□□□□□ -0.68
ARHGEF1-202ENST00000347545 MXRA5Q9NR99 2828 aa10.78□□□□□ -0.68
ARHGEF1-202ENST00000347545 CYSLTR1Q9Y271 337 aa10.78□□□□□ -0.68
ARHGEF1-202ENST00000347545 K7EQG2 157 aa10.78□□□□□ -0.68
ARHGEF1-202ENST00000347545 LGALS9O00182 355 aa10.78□□□□□ -0.68
ARHGEF1-202ENST00000347545 FOXI2Q6ZQN5 318 aa10.78□□□□□ -0.68
ARHGEF1-202ENST00000347545 Q8N1Y9 231 aa10.77□□□□□ -0.69
ARHGEF1-202ENST00000347545 KLHL30-AS1Q8NEE0 82 aa10.77□□□□□ -0.69
ARHGEF1-202ENST00000347545 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
ARHGEF1-202ENST00000347545 MAPK1IP1LQ8NDC0 245 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 SDHAF1A6NFY7 115 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 F5H697 171 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 J3QR89 54 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 CRYBA4P53673 196 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 RRN3P1Q2M238 152 aa10.76□□□□□ -0.69
ARHGEF1-202ENST00000347545 CACNA1AO00555 2505 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 TRBV6-5A0A0K0K1A5 114 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 SYNJ2BPP57105 145 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 TSPEAR-AS2P59090 65 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 SPINK13Q1W4C9 94 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 FAM74A4Q5TZK3 123 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 F8W1H4 67 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 VCYO14598 125 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 GATA3P23771 443 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 DUX5Q96PT3 197 aa10.75□□□□□ -0.69
ARHGEF1-202ENST00000347545 ANKRD17O75179 2603 aaKnown RBP10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 M0QY20 66 aa10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 SCGB2A2Q13296 93 aa10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 ZNRF2Q8NHG8 242 aa10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 CR1P17927 2039 aa10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 PMVKQ15126 192 aa10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 LINC01356Q8N9X3 169 aa10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 DOPEY2Q9Y3R5 2298 aa10.74□□□□□ -0.69
ARHGEF1-202ENST00000347545 TMEM89A2RUT3 159 aa10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 AKAP9Q99996 3911 aa10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 RBMY1A1P0DJD3 496 aaKnown RBP10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 RBMY1CP0DJD4 496 aa10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 SCGB1A1P11684 91 aa10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 RBMY1FQ15415 496 aaKnown RBP10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 TIMM17AQ99595 171 aa10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 SPATA25Q9BR10 227 aa10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
ARHGEF1-202ENST00000347545 SORL1Q92673 2214 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 IGHV1OR15-1A0A075B7D0 117 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 SYT8Q8NBV8 401 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 KIR2DL4Q99706 377 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 ZNF702PQ9H963 129 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 PRO0461Q9UI25 63 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 ZNF256Q9Y2P7 627 aaPredicted RBP10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 P0DMU3 169 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 FAM231AP0DMU4 169 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 FAM231CP0DMU5 169 aa10.72□□□□□ -0.69
ARHGEF1-202ENST00000347545 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms