RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 LINC01548A6NM66 108 aa11.79□□□□□ -0.52
R3HDM2-201ENST00000347140 Q8NA96 180 aa11.79□□□□□ -0.52
R3HDM2-201ENST00000347140 SMIM20Q8N5G0 67 aa11.79□□□□□ -0.52
R3HDM2-201ENST00000347140 TIMM17AQ99595 171 aa11.79□□□□□ -0.52
R3HDM2-201ENST00000347140 NDUFA4O00483 81 aa11.79□□□□□ -0.52
R3HDM2-201ENST00000347140 TRPT1Q86TN4 253 aaKnown RBP11.79□□□□□ -0.52
R3HDM2-201ENST00000347140 M0R2P5 195 aa11.79□□□□□ -0.52
R3HDM2-201ENST00000347140 IGHV3-30P01768 117 aa11.78□□□□□ -0.52
R3HDM2-201ENST00000347140 IGHV3-30-5P0DP03 117 aa11.78□□□□□ -0.52
R3HDM2-201ENST00000347140 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
R3HDM2-201ENST00000347140 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
R3HDM2-201ENST00000347140 Q6ZS46 218 aa11.78□□□□□ -0.52
R3HDM2-201ENST00000347140 LEPROTO15243 131 aa11.77□□□□□ -0.52
R3HDM2-201ENST00000347140 CD28P10747 220 aa11.77□□□□□ -0.52
R3HDM2-201ENST00000347140 H3BMM0 161 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 MUSTN1Q8IVN3 82 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 UBE2WQ96B02 151 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 SPXQ9BT56 116 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 COL6A6A6NMZ7 2263 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 JPT2Q9H910 190 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 IFITM1P13164 125 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 CARD19Q96LW7 228 aa11.77□□□□□ -0.53
R3HDM2-201ENST00000347140 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
R3HDM2-201ENST00000347140 ZNF575Q86XF7 245 aa11.76□□□□□ -0.53
R3HDM2-201ENST00000347140 TIMM21Q9BVV7 248 aa11.76□□□□□ -0.53
R3HDM2-201ENST00000347140 UNQ9165/PRO28630Q6UXU0 137 aa11.76□□□□□ -0.53
R3HDM2-201ENST00000347140 C11orf68Q9H3H3 251 aaKnown RBP11.76□□□□□ -0.53
R3HDM2-201ENST00000347140 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 GAGE12JA6NER3 117 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 GAGE7O76087 117 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 GAGE4Q13068 117 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 SIRPDQ9H106 197 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 NPC2P61916 151 aa11.75□□□□□ -0.53
R3HDM2-201ENST00000347140 WDFY4Q6ZS81 3184 aa11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 USMG5Q96IX5 58 aa11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 COX6B1P14854 86 aa11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 ITLN2Q8WWU7 325 aaPredicted RBP11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 DAZ1Q9NQZ3 744 aaKnown RBP11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 ZFHX2Q9C0A1 2572 aaPredicted RBP11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 IGLV4-69A0A075B6H9 119 aa11.74□□□□□ -0.53
R3HDM2-201ENST00000347140 C5orf56Q8N8D9 126 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 OPRPNQ99935 248 aaPredicted RBP11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 TLN1Q9Y490 2541 aaKnown RBP11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 RNASE3P12724 160 aaKnown RBP11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 RHOHQ15669 191 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 SVIPQ8NHG7 77 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 U3KQE9 123 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 DNAL4O96015 105 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 BRD3OSQ6XYD6 125 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 EDA2RQ9HAV5 297 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 TNFRSF18Q9Y5U5 241 aa11.73□□□□□ -0.53
R3HDM2-201ENST00000347140 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 IGHV3-33P01772 117 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 IGIPA6NJ69 53 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 I3L3M4 83 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 Q8N1Y9 231 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 GPHB5Q86YW7 130 aa11.72□□□□□ -0.53
R3HDM2-201ENST00000347140 CRYGDP07320 174 aa11.71□□□□□ -0.53
R3HDM2-201ENST00000347140 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.53
R3HDM2-201ENST00000347140 A0A0B4J2C4 111 aa11.71□□□□□ -0.53
R3HDM2-201ENST00000347140 YAE1D1Q9NRH1 226 aa11.71□□□□□ -0.53
R3HDM2-201ENST00000347140 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.54
R3HDM2-201ENST00000347140 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.54
R3HDM2-201ENST00000347140 IGHV4OR15-8A0A075B7B6 117 aa11.7□□□□□ -0.54
R3HDM2-201ENST00000347140 A0A087WW49 117 aa11.7□□□□□ -0.54
R3HDM2-201ENST00000347140 RPL32P62910 135 aaKnown RBP11.7□□□□□ -0.54
R3HDM2-201ENST00000347140 TRAV12-2A0A075B6T6 113 aa11.7□□□□□ -0.54
R3HDM2-201ENST00000347140 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
R3HDM2-201ENST00000347140 NDUFV3P56181 108 aaKnown RBP11.7□□□□□ -0.54
R3HDM2-201ENST00000347140 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
R3HDM2-201ENST00000347140 RHODO00212 210 aa11.69□□□□□ -0.54
R3HDM2-201ENST00000347140 NDUFA12Q9UI09 145 aa11.69□□□□□ -0.54
R3HDM2-201ENST00000347140 IGHV3-73A0A0B4J1V6 119 aa11.69□□□□□ -0.54
R3HDM2-201ENST00000347140 TRBV10-2A0A0K0K1G8 114 aa11.69□□□□□ -0.54
R3HDM2-201ENST00000347140 IGHV1-69P01742 117 aa11.69□□□□□ -0.54
R3HDM2-201ENST00000347140 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
R3HDM2-201ENST00000347140 TSHBP01222 138 aa11.68□□□□□ -0.54
R3HDM2-201ENST00000347140 P0DMU3 169 aa11.68□□□□□ -0.54
R3HDM2-201ENST00000347140 FAM231AP0DMU4 169 aa11.68□□□□□ -0.54
R3HDM2-201ENST00000347140 FAM231CP0DMU5 169 aa11.68□□□□□ -0.54
R3HDM2-201ENST00000347140 TEX49A0A1B0GTD5 131 aa11.68□□□□□ -0.54
R3HDM2-201ENST00000347140 TMEM223A0PJW6 202 aa11.68□□□□□ -0.54
R3HDM2-201ENST00000347140 TRAV8-3A0A0A6YYJ7 113 aa11.67□□□□□ -0.54
R3HDM2-201ENST00000347140 CRIP2P52943 208 aaPredicted RBP11.67□□□□□ -0.54
R3HDM2-201ENST00000347140 FHL3Q13643 280 aa11.67□□□□□ -0.54
R3HDM2-201ENST00000347140 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
R3HDM2-201ENST00000347140 ANKRD11Q6UB99 2663 aaPredicted RBP11.67□□□□□ -0.54
R3HDM2-201ENST00000347140 IGHV1OR15-1A0A075B7D0 117 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1639.4 ms