RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 JPT2Q9H910 190 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 A0A087WWC5 75 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 RAB19A4D1S5 217 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 OR5AL1P0C617 328 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 DNAH10OSP0CZ25 163 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 LINC00315P59091 139 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 LELP1Q5T871 98 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 WFDC10BQ8IUB3 73 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 TPPP3Q9BW30 176 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 SAMD10Q9BYL1 202 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 KRTAP1-5Q9BYS1 174 aa10.77□□□□□ -0.69
TSPAN4-201ENST00000346501 RBFOX3A6NFN3 312 aa10.76□□□□□ -0.69
TSPAN4-201ENST00000346501 SNAI2O43623 268 aa10.76□□□□□ -0.69
TSPAN4-201ENST00000346501 CRYGDP07320 174 aa10.76□□□□□ -0.69
TSPAN4-201ENST00000346501 NKX2-5P52952 324 aaPredicted RBP10.76□□□□□ -0.69
TSPAN4-201ENST00000346501 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
TSPAN4-201ENST00000346501 ZNF56Q15929 161 aa10.76□□□□□ -0.69
TSPAN4-201ENST00000346501 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
TSPAN4-201ENST00000346501 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 A0A1B0GVG6 124 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 TMEM250H0YL14 139 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 UFSP1Q6NVU6 142 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 FER1L6-AS1Q8NA97 138 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 OR10AG1Q8NH19 301 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 AP1S3Q96PC3 154 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 SSBP4Q9BWG4 385 aaPredicted RBP10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 EIF5A2Q9GZV4 153 aaKnown RBP10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 MSRB1Q9NZV6 116 aa10.75□□□□□ -0.69
TSPAN4-201ENST00000346501 FRAS1Q86XX4 4008 aa10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 F2Z2F3 143 aa10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 F5H697 171 aa10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 RAB4BP61018 213 aa10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 SSTP61278 116 aa10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 LINC01556Q5JQF7 62 aa10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 Q6ZSN1 163 aa10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
TSPAN4-201ENST00000346501 IGLV2-8P01709 118 aa10.73□□□□□ -0.69
TSPAN4-201ENST00000346501 CEBPGP53567 150 aa10.73□□□□□ -0.69
TSPAN4-201ENST00000346501 ERVFC1-1P60608 527 aa10.73□□□□□ -0.69
TSPAN4-201ENST00000346501 CACNG7P62955 275 aa10.73□□□□□ -0.69
TSPAN4-201ENST00000346501 URGCP-MRPS24S4R325 110 aa10.73□□□□□ -0.69
TSPAN4-201ENST00000346501 DNAH10Q8IVF4 4471 aa10.72□□□□□ -0.69
TSPAN4-201ENST00000346501 C19orf71A6NCJ1 209 aa10.72□□□□□ -0.69
TSPAN4-201ENST00000346501 KCNIP4Q6PIL6 250 aa10.72□□□□□ -0.69
TSPAN4-201ENST00000346501 ZNF575Q86XF7 245 aa10.72□□□□□ -0.69
TSPAN4-201ENST00000346501 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.69
TSPAN4-201ENST00000346501 MUC21A0A0G2JKD1 596 aa10.71□□□□□ -0.69
TSPAN4-201ENST00000346501 MUC21A0A140T8X8 626 aa10.71□□□□□ -0.69
TSPAN4-201ENST00000346501 C16orf90A8MZG2 172 aa10.71□□□□□ -0.69
TSPAN4-201ENST00000346501 PSCAO43653 123 aa10.71□□□□□ -0.69
TSPAN4-201ENST00000346501 TOR2AQ5JU69 321 aa10.71□□□□□ -0.69
TSPAN4-201ENST00000346501 LYPD6BQ8NI32 183 aa10.71□□□□□ -0.69
TSPAN4-201ENST00000346501 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 H7C1H1 209 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 IGHV3-30P01768 117 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 IGHV3-33P01772 117 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 TRGC1P0CF51 173 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 IGHV3-30-3P0DP02 117 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 IGHV3-30-5P0DP03 117 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 GZMBP10144 247 aa10.7□□□□□ -0.7
TSPAN4-201ENST00000346501 NDUFS6O75380 124 aaKnown RBP10.69□□□□□ -0.7
TSPAN4-201ENST00000346501 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
TSPAN4-201ENST00000346501 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
TSPAN4-201ENST00000346501 SPATA12Q7Z6I5 190 aa10.69□□□□□ -0.7
TSPAN4-201ENST00000346501 NUDT10Q8NFP7 164 aa10.69□□□□□ -0.7
TSPAN4-201ENST00000346501 NUDT11Q96G61 164 aa10.69□□□□□ -0.7
TSPAN4-201ENST00000346501 RPP21Q9H633 154 aaKnown RBP10.69□□□□□ -0.7
TSPAN4-201ENST00000346501 IBA57-AS1B1ANH7 110 aa10.68□□□□□ -0.7
TSPAN4-201ENST00000346501 MGPP08493 103 aa10.68□□□□□ -0.7
TSPAN4-201ENST00000346501 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
TSPAN4-201ENST00000346501 OCC1Q8TAD7 63 aa10.68□□□□□ -0.7
TSPAN4-201ENST00000346501 FAM210AQ96ND0 272 aa10.68□□□□□ -0.7
TSPAN4-201ENST00000346501 A0A087WX48 190 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 LAGE3Q14657 143 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 ELOBQ15370 118 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 WDR73Q6P4I2 378 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 SMIM15Q7Z3B0 74 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 OR10G8Q8NGN5 311 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 SMIM7Q9BQ49 75 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 TM2D2Q9BX73 214 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
TSPAN4-201ENST00000346501 TRAV8-3A0A0A6YYJ7 113 aa10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 GATCO43716 136 aaKnown RBP10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 UBE2D3P61077 147 aa10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 UBE2D2P62837 147 aa10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 Q6ZRN7 208 aaPredicted RBP10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 BORCS7Q96B45 105 aa10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 RNASE7Q9H1E1 156 aaKnown RBP10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 Q9HAA7 133 aa10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
TSPAN4-201ENST00000346501 ZNF727A8MUV8 499 aa10.65□□□□□ -0.7
TSPAN4-201ENST00000346501 A8MWL6 223 aa10.65□□□□□ -0.7
TSPAN4-201ENST00000346501 PKIAP61925 76 aa10.65□□□□□ -0.7
TSPAN4-201ENST00000346501 CHCHD7Q9BUK0 85 aa10.65□□□□□ -0.7
TSPAN4-201ENST00000346501 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
TSPAN4-201ENST00000346501 Q9UF83 564 aa10.65□□□□□ -0.7
TSPAN4-201ENST00000346501 K7EN84 100 aa10.64□□□□□ -0.71
TSPAN4-201ENST00000346501 NTF3P20783 257 aa10.64□□□□□ -0.71
TSPAN4-201ENST00000346501 TWIST1Q15672 202 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms