RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZMAT5Q9UDW3 170 aaKnown RBP9.86□□□□□ -0.83
CDC42-202ENST00000344548 INSP01308 110 aa9.86□□□□□ -0.83
CDC42-202ENST00000344548 FAM74A4Q5TZK3 123 aa9.86□□□□□ -0.83
CDC42-202ENST00000344548 DEFB104AQ8WTQ1 72 aa9.86□□□□□ -0.83
CDC42-202ENST00000344548 TRGV11A0A075B6L2 103 aa9.85□□□□□ -0.83
CDC42-202ENST00000344548 ZNF664Q8N3J9 261 aa9.85□□□□□ -0.83
CDC42-202ENST00000344548 MAP1LC3AQ9H492 121 aa9.85□□□□□ -0.83
CDC42-202ENST00000344548 LEPROTL1O95214 131 aa9.85□□□□□ -0.83
CDC42-202ENST00000344548 POM121L12Q8N7R1 296 aa9.85□□□□□ -0.83
CDC42-202ENST00000344548 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
CDC42-202ENST00000344548 PRO1933Q9H354 126 aa9.85□□□□□ -0.83
CDC42-202ENST00000344548 NACAE9PAV3 2078 aa9.84□□□□□ -0.83
CDC42-202ENST00000344548 TCAPO15273 167 aa9.84□□□□□ -0.83
CDC42-202ENST00000344548 IGLL1P15814 213 aa9.84□□□□□ -0.83
CDC42-202ENST00000344548 MRAP2Q96G30 205 aa9.84□□□□□ -0.83
CDC42-202ENST00000344548 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
CDC42-202ENST00000344548 SUMO4Q6EEV6 95 aa9.84□□□□□ -0.83
CDC42-202ENST00000344548 LAMTOR2Q9Y2Q5 125 aa9.84□□□□□ -0.83
CDC42-202ENST00000344548 PKD1L1Q8TDX9 2849 aa9.83□□□□□ -0.84
CDC42-202ENST00000344548 NEGR1Q7Z3B1 354 aa9.83□□□□□ -0.84
CDC42-202ENST00000344548 ATOH7Q8N100 152 aa9.83□□□□□ -0.84
CDC42-202ENST00000344548 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
CDC42-202ENST00000344548 TMEM208Q9BTX3 173 aa9.83□□□□□ -0.84
CDC42-202ENST00000344548 IGHV3-73A0A0B4J1V6 119 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 PRSS47A8MTI9 375 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 MORN3Q6PF18 240 aaPredicted RBP9.82□□□□□ -0.84
CDC42-202ENST00000344548 ZNF747Q9BV97 191 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 Q9UF83 564 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 LINC01546A6NGU7 62 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 F5H697 171 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 C9orf66Q5T8R8 295 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 Q8N8P6 123 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 MRPL16Q9NX20 251 aaKnown RBP9.82□□□□□ -0.84
CDC42-202ENST00000344548 COL6A5A8TX70 2615 aa9.82□□□□□ -0.84
CDC42-202ENST00000344548 SMIM17P0DL12 118 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 BTF3P20290 206 aaKnown RBP9.81□□□□□ -0.84
CDC42-202ENST00000344548 CMC4P56277 68 aaPredicted RBP9.81□□□□□ -0.84
CDC42-202ENST00000344548 NUTF2P61970 127 aaKnown RBP9.81□□□□□ -0.84
CDC42-202ENST00000344548 SYT8Q8NBV8 401 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 LINC00467Q9BRT7 94 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 H0Y8G0 127 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 SYS1-DBNDD2H3BUS1 97 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
CDC42-202ENST00000344548 TEX43Q6ZNM6 134 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 WFDC9Q8NEX5 89 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 PMCHL2Q9BQD1 86 aa9.81□□□□□ -0.84
CDC42-202ENST00000344548 INSL3P51460 131 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 CTAG1AP78358 180 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 ZNF415Q09FC8 603 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 Q6ZSN1 163 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 RNASE8Q8TDE3 154 aaKnown RBP9.8□□□□□ -0.84
CDC42-202ENST00000344548 TMEM70Q9BUB7 260 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 NXT2Q9NPJ8 142 aaKnown RBP9.8□□□□□ -0.84
CDC42-202ENST00000344548 M0QY20 66 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 M0R2P5 195 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 P0DMU3 169 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 FAM231AP0DMU4 169 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 FAM231CP0DMU5 169 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 ZNF56Q15929 161 aa9.8□□□□□ -0.84
CDC42-202ENST00000344548 LINC00587B1AMM8 73 aa9.79□□□□□ -0.84
CDC42-202ENST00000344548 HBDP02042 147 aa9.79□□□□□ -0.84
CDC42-202ENST00000344548 UFSP1Q6NVU6 142 aa9.79□□□□□ -0.84
CDC42-202ENST00000344548 IL17DQ8TAD2 202 aa9.79□□□□□ -0.84
CDC42-202ENST00000344548 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
CDC42-202ENST00000344548 C18orf15Q96N68 181 aa9.79□□□□□ -0.84
CDC42-202ENST00000344548 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
CDC42-202ENST00000344548 PAM16Q9Y3D7 125 aa9.78□□□□□ -0.84
CDC42-202ENST00000344548 FCER1GP30273 86 aa9.77□□□□□ -0.84
CDC42-202ENST00000344548 S100A12P80511 92 aa9.77□□□□□ -0.84
CDC42-202ENST00000344548 CFAP126Q5VTH2 177 aa9.77□□□□□ -0.84
CDC42-202ENST00000344548 GTSCR1Q86UQ5 136 aa9.77□□□□□ -0.84
CDC42-202ENST00000344548 C20orf78Q9BR46 151 aa9.77□□□□□ -0.84
CDC42-202ENST00000344548 CSTL1Q9H114 145 aa9.77□□□□□ -0.84
CDC42-202ENST00000344548 POLR2KP53803 58 aaKnown RBP9.77□□□□□ -0.85
CDC42-202ENST00000344548 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
CDC42-202ENST00000344548 ZNF705AQ6ZN79 300 aaPredicted RBP9.77□□□□□ -0.85
CDC42-202ENST00000344548 HSPB8Q9UJY1 196 aa9.77□□□□□ -0.85
CDC42-202ENST00000344548 LAGE3Q14657 143 aa9.76□□□□□ -0.85
CDC42-202ENST00000344548 Q6ZTI0 123 aa9.76□□□□□ -0.85
CDC42-202ENST00000344548 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
CDC42-202ENST00000344548 CMYA5Q8N3K9 4069 aa9.75□□□□□ -0.85
CDC42-202ENST00000344548 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
CDC42-202ENST00000344548 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
CDC42-202ENST00000344548 NOP10Q9NPE3 64 aaKnown RBP9.75□□□□□ -0.85
CDC42-202ENST00000344548 PKIAP61925 76 aa9.75□□□□□ -0.85
CDC42-202ENST00000344548 SPXQ9BT56 116 aa9.75□□□□□ -0.85
CDC42-202ENST00000344548 ST20Q9HBF5 79 aa9.75□□□□□ -0.85
CDC42-202ENST00000344548 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
CDC42-202ENST00000344548 C3orf56Q8N813 242 aa9.74□□□□□ -0.85
CDC42-202ENST00000344548 IFI27L1Q96BM0 104 aa9.74□□□□□ -0.85
CDC42-202ENST00000344548 GOLT1BQ9Y3E0 138 aa9.74□□□□□ -0.85
CDC42-202ENST00000344548 KIR2DL5BA0A0G2JN68 375 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 KIR2DL5BA0A0G2JPC4 375 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 A8MWV9 139 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 KIR2DL5AQ8N109 375 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 PTH2Q96A98 100 aa9.73□□□□□ -0.85
CDC42-202ENST00000344548 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms