RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 IL17DQ8TAD2 202 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 A8MZ25 164 aa10.62□□□□□ -0.71
CDK5RAP3-201ENST00000338399 ORMDL3Q8N138 153 aa10.62□□□□□ -0.71
CDK5RAP3-201ENST00000338399 C18orf32Q8TCD1 76 aa10.62□□□□□ -0.71
CDK5RAP3-201ENST00000338399 SAMD10Q9BYL1 202 aa10.62□□□□□ -0.71
CDK5RAP3-201ENST00000338399 U3KQK5 164 aa10.62□□□□□ -0.71
CDK5RAP3-201ENST00000338399 TRAV26-2A0A0B4J265 109 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 PLAC8L1A1L4L8 177 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 GAS8-AS1O95177 125 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DEFA6Q01524 100 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 Q0VG73 95 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 OR10J3Q5JRS4 329 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 FAM74A4Q5TZK3 123 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 BAGE3Q86Y29 109 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 PTH2Q96A98 100 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 X6R8D5 127 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 PRB2P02812 416 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 CRYGDP07320 174 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 LINC00315P59091 139 aa10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 NOP10Q9NPE3 64 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-201ENST00000338399 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-201ENST00000338399 COA6Q5JTJ3 125 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-201ENST00000338399 CDPF1Q6NVV7 123 aa10.6□□□□□ -0.71
CDK5RAP3-201ENST00000338399 HIST3H2BBQ8N257 126 aa10.6□□□□□ -0.71
CDK5RAP3-201ENST00000338399 NACAE9PAV3 2078 aa10.6□□□□□ -0.71
CDK5RAP3-201ENST00000338399 TRGV1A0A0A0MS02 117 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 SMIM9A6NGZ8 99 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 PPBPP02775 128 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 PIK3CD-AS1Q5SR53 167 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 RASL10AQ92737 203 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 F5H697 171 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 NPYP01303 97 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 EMP1P54849 157 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DAZ2Q13117 558 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 PDZD11Q5EBL8 140 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 Q6ZTI0 123 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 Q6ZWC4 215 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 OR10D4PQ8NGN7 298 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 RNF183Q96D59 192 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 MRAP2Q96G30 205 aa10.59□□□□□ -0.71
CDK5RAP3-201ENST00000338399 A8MWV9 139 aa10.58□□□□□ -0.72
CDK5RAP3-201ENST00000338399 NUPR1O60356 82 aa10.58□□□□□ -0.72
CDK5RAP3-201ENST00000338399 SERF1AO75920 110 aa10.58□□□□□ -0.72
CDK5RAP3-201ENST00000338399 POM121L12Q8N7R1 296 aa10.58□□□□□ -0.72
CDK5RAP3-201ENST00000338399 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 LINC00310P59036 64 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 ZNF56Q15929 161 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 KPRPQ5T749 579 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 CFAP126Q5VTH2 177 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 OVOL2Q9BRP0 275 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 LOC389332A0A1B0GUA5 103 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 LGALS9BQ3B8N2 356 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
CDK5RAP3-201ENST00000338399 RS1O15537 224 aa10.56□□□□□ -0.72
CDK5RAP3-201ENST00000338399 PKIAP61925 76 aa10.56□□□□□ -0.72
CDK5RAP3-201ENST00000338399 NIT1Q86X76 327 aa10.56□□□□□ -0.72
CDK5RAP3-201ENST00000338399 NRACQ8N912 160 aa10.56□□□□□ -0.72
CDK5RAP3-201ENST00000338399 NDUFAF3Q9BU61 184 aa10.56□□□□□ -0.72
CDK5RAP3-201ENST00000338399 LAMTOR2Q9Y2Q5 125 aa10.56□□□□□ -0.72
CDK5RAP3-201ENST00000338399 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
CDK5RAP3-201ENST00000338399 K7EIL1 84 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 UFSP1Q6NVU6 142 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 RPL39LQ96EH5 51 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 URB1-AS1Q96HZ7 61 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 GAGE12BA1L429 117 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 GAGE7O76087 117 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 GAGE12FP0CL80 117 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 GAGE12GP0CL81 117 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 GAGE12IP0CL82 117 aa10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 RNASEKQ6P5S7 137 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-201ENST00000338399 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
CDK5RAP3-201ENST00000338399 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
CDK5RAP3-201ENST00000338399 DEFB4AO15263 64 aa10.54□□□□□ -0.72
CDK5RAP3-201ENST00000338399 OR4C5Q8NGB2 326 aa10.54□□□□□ -0.72
CDK5RAP3-201ENST00000338399 PRSS3P2Q8NHM4 247 aa10.54□□□□□ -0.72
CDK5RAP3-201ENST00000338399 MAP1LC3AQ9H492 121 aa10.54□□□□□ -0.72
CDK5RAP3-201ENST00000338399 RETNQ9HD89 108 aa10.54□□□□□ -0.72
CDK5RAP3-201ENST00000338399 LINC00614P0C842 121 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 MIFP14174 115 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 DDTP30046 118 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 IFI27P40305 119 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 ZNF479Q96JC4 524 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 MGAM2Q2M2H8 2515 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 TSTD3H0UI37 97 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 RHODO00212 210 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 IGHV3-53P01767 116 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 ESDP10768 282 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 KRTAP21-3Q3LHN1 58 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 DEFB121Q5J5C9 76 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 Q8NAQ8 132 aa10.53□□□□□ -0.72
CDK5RAP3-201ENST00000338399 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
CDK5RAP3-201ENST00000338399 M0QY20 66 aa10.52□□□□□ -0.73
CDK5RAP3-201ENST00000338399 Q6ZSN1 163 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms