RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 HIST2H2BCQ6DN03 193 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 AJUBAQ96IF1 538 aa6.32□□□□□ -1.4
HPS4-201ENST00000336873 WI2-2373I1.2A0A1W2PRP0 233 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 NPIPB6E9PJ23 425 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 SLC25A16P16260 332 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
HPS4-201ENST00000336873 DEFB125Q8N687 156 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 SPXQ9BT56 116 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 TP53TG1Q9Y2A0 90 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 TRBV7-1A0A0A6YYK4 115 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 DEFB131AP59861 70 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 SEC11AP67812 179 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 NPBQ8NG41 125 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 LINC01587Q99440 93 aa6.31□□□□□ -1.4
HPS4-201ENST00000336873 MSMBP08118 114 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 LMO4P61968 165 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 CFHR3Q02985 330 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 DEFB112Q30KQ8 113 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 SH2D6Q7Z4S9 175 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 C8orf31Q8N9H6 132 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 SCRT2Q9NQ03 307 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 LY6LH3BQJ8 138 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 TNFRSF13BO14836 293 aaPredicted RBP6.3□□□□□ -1.4
HPS4-201ENST00000336873 DAZ1Q9NQZ3 744 aaKnown RBP6.3□□□□□ -1.4
HPS4-201ENST00000336873 XCL2Q9UBD3 114 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 GCN1Q92616 2671 aaKnown RBP6.3□□□□□ -1.4
HPS4-201ENST00000336873 HLA-DRB4P13762 266 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
HPS4-201ENST00000336873 LINC01545Q5VT33 79 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 TMEM190Q8WZ59 177 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 RNF183Q96D59 192 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 HLA-DRB4X5D2U9 266 aa6.3□□□□□ -1.4
HPS4-201ENST00000336873 TRBV25-1A0A075B6N4 114 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 PRSS29PA6NIE9 313 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 INS-IGF2F8WCM5 200 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 HERVK_113P61574 105 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 PRR9Q5T870 116 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 C5orf56Q8N8D9 126 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 K7EP34 96 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
HPS4-201ENST00000336873 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 C9orf139Q6ZV77 190 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 SIRPDQ9H106 197 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 DPH3P1Q9H4G8 78 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 SDHAF1A6NFY7 115 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 F8W735 103 aaPredicted RBP6.29□□□□□ -1.4
HPS4-201ENST00000336873 APRG1Q8IVJ8 170 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
HPS4-201ENST00000336873 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 TOMM7Q9P0U1 55 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 UBR5O95071 2799 aaPredicted RBP6.28□□□□□ -1.4
HPS4-201ENST00000336873 F8P00451 2351 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 B4DSR2 109 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 CEMP1Q6PRD7 247 aaPredicted RBP6.28□□□□□ -1.4
HPS4-201ENST00000336873 VCX2Q9H322 139 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 MDFICQ9P1T7 246 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 C9orf118A6NHY6 69 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 OOSP1A8MZH6 123 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 FBXL19-AS1Q494R0 122 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 OR9G4Q8NGQ1 327 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 PRADC1Q9BSG0 188 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 TNFRSF18Q9Y5U5 241 aa6.28□□□□□ -1.4
HPS4-201ENST00000336873 LINC01549A6NIU2 74 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 AVPP01185 164 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 P0DMU3 169 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 FAM231AP0DMU4 169 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 FAM231CP0DMU5 169 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 LGALS9BQ3B8N2 356 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 LGALS9CQ6DKI2 356 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 PRORYQ9H606 182 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 CRXO43186 299 aaPredicted RBP6.27□□□□□ -1.41
HPS4-201ENST00000336873 NBEAL1Q6ZS30 2694 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 ODF3BA8MYP8 253 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 SNCGO76070 127 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 SLURP1P55000 103 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 Q8N8P6 123 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 SYT8Q8NBV8 401 aa6.27□□□□□ -1.41
HPS4-201ENST00000336873 TRBV20-1A0A075B6N2 111 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 HOXA3O43365 443 aaPredicted RBP6.26□□□□□ -1.41
HPS4-201ENST00000336873 ORMDL2Q53FV1 153 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 TCTEX1D4Q5JR98 221 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 H7C1H1 209 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 OVOL1O14753 267 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 RPL35AP18077 110 aaKnown RBP6.26□□□□□ -1.41
HPS4-201ENST00000336873 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
HPS4-201ENST00000336873 MGAM2Q2M2H8 2515 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 CD28P10747 220 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 FGF6P10767 208 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 WFDC2Q14508 124 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 GAGE13Q4V321 117 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 GAGE2EQ4V326 116 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 GAGE2DQ9UEU5 116 aa6.26□□□□□ -1.41
HPS4-201ENST00000336873 SRSF2Q01130 221 aaKnown RBP6.25□□□□□ -1.41
HPS4-201ENST00000336873 C3orf56Q8N813 242 aa6.25□□□□□ -1.41
HPS4-201ENST00000336873 ZFAND3Q9H8U3 227 aa6.25□□□□□ -1.41
HPS4-201ENST00000336873 A0A096LNJ9 63 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms