RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 UBE2AP49459 152 aa16.2■□□□□ 0.18
RNF40-201ENST00000324685 FOXI1Q12951 378 aa16.2■□□□□ 0.18
RNF40-201ENST00000324685 IGF2-ASQ6U949 168 aa16.2■□□□□ 0.18
RNF40-201ENST00000324685 C10orf105Q8TEF2 133 aa16.2■□□□□ 0.18
RNF40-201ENST00000324685 J3KT08 172 aa16.2■□□□□ 0.18
RNF40-201ENST00000324685 GPHB5Q86YW7 130 aa16.2■□□□□ 0.18
RNF40-201ENST00000324685 KMT2EQ8IZD2 1858 aa16.19■□□□□ 0.18
RNF40-201ENST00000324685 DAND5Q8N907 189 aa16.19■□□□□ 0.18
RNF40-201ENST00000324685 DIRC1Q969H9 104 aa16.19■□□□□ 0.18
RNF40-201ENST00000324685 LECT2O14960 151 aa16.19■□□□□ 0.18
RNF40-201ENST00000324685 TDRG1Q3Y452 100 aa16.19■□□□□ 0.18
RNF40-201ENST00000324685 F8W735 103 aaPredicted RBP16.18■□□□□ 0.18
RNF40-201ENST00000324685 TAX1BP3O14907 124 aa16.18■□□□□ 0.18
RNF40-201ENST00000324685 WFDC2Q14508 124 aa16.18■□□□□ 0.18
RNF40-201ENST00000324685 ARFGEF3Q5TH69 2177 aa16.18■□□□□ 0.18
RNF40-201ENST00000324685 RLFQ13129 1914 aa16.18■□□□□ 0.18
RNF40-201ENST00000324685 C4orf3Q8WVX3 66 aa16.17■□□□□ 0.18
RNF40-201ENST00000324685 TM2D2Q9BX73 214 aa16.17■□□□□ 0.18
RNF40-201ENST00000324685 IGHV1-58A0A0C4DH39 117 aa16.17■□□□□ 0.18
RNF40-201ENST00000324685 MYCNOSP40205 109 aa16.16■□□□□ 0.18
RNF40-201ENST00000324685 TMEM256-PLSCR3K7ERE1 68 aa16.16■□□□□ 0.18
RNF40-201ENST00000324685 SPAG11BQ08648 103 aa16.16■□□□□ 0.18
RNF40-201ENST00000324685 HIGD2BQ4VC39 106 aa16.16■□□□□ 0.18
RNF40-201ENST00000324685 LYPD6Q86Y78 171 aa16.16■□□□□ 0.18
RNF40-201ENST00000324685 NLRC5Q86WI3 1866 aa16.15■□□□□ 0.18
RNF40-201ENST00000324685 ODF1Q14990 250 aa16.15■□□□□ 0.18
RNF40-201ENST00000324685 CLEC2BQ92478 149 aa16.15■□□□□ 0.18
RNF40-201ENST00000324685 PDE6GP18545 87 aa16.14■□□□□ 0.17
RNF40-201ENST00000324685 WT1P19544 449 aaPredicted RBP16.14■□□□□ 0.17
RNF40-201ENST00000324685 C14orf132Q9NPU4 83 aa16.13■□□□□ 0.17
RNF40-201ENST00000324685 ODF3L1Q8IXM7 274 aa16.13■□□□□ 0.17
RNF40-201ENST00000324685 TTTY13Q9BZ97 58 aa16.13■□□□□ 0.17
RNF40-201ENST00000324685 HELZP42694 1942 aaKnown RBP16.13■□□□□ 0.17
RNF40-201ENST00000324685 IGLV1-47P01700 117 aa16.13■□□□□ 0.17
RNF40-201ENST00000324685 PROP1O75360 226 aa16.12■□□□□ 0.17
RNF40-201ENST00000324685 MIR7-3HGQ8N6C7 128 aa16.12■□□□□ 0.17
RNF40-201ENST00000324685 DAZAP2Q15038 168 aaPredicted RBP16.11■□□□□ 0.17
RNF40-201ENST00000324685 C20orf203Q8NBC4 194 aa16.11■□□□□ 0.17
RNF40-201ENST00000324685 ESM1Q9NQ30 184 aa16.11■□□□□ 0.17
RNF40-201ENST00000324685 EP300Q09472 2414 aaPredicted RBP16.11■□□□□ 0.17
RNF40-201ENST00000324685 C19orf71A6NCJ1 209 aa16.11■□□□□ 0.17
RNF40-201ENST00000324685 CRYGBP07316 175 aa16.11■□□□□ 0.17
RNF40-201ENST00000324685 Q8N7P7 452 aa16.11■□□□□ 0.17
RNF40-201ENST00000324685 IGLV2-14P01704 120 aa16.11■□□□□ 0.17
RNF40-201ENST00000324685 TMEM263Q8WUH6 116 aaKnown RBP16.1■□□□□ 0.17
RNF40-201ENST00000324685 MGAMO43451 1857 aa16.1■□□□□ 0.17
RNF40-201ENST00000324685 SEM1Q6ZVN7 128 aa16.09■□□□□ 0.17
RNF40-201ENST00000324685 TRBV12-3P01733 135 aa16.09■□□□□ 0.17
RNF40-201ENST00000324685 HEATR5AQ86XA9 2040 aa16.09■□□□□ 0.17
RNF40-201ENST00000324685 ADORA2A-AS1P86434 159 aa16.09■□□□□ 0.17
RNF40-201ENST00000324685 NFE4Q86UQ8 179 aa16.09■□□□□ 0.17
RNF40-201ENST00000324685 TRBV10-1A0A0K0K1A3 114 aa16.08■□□□□ 0.17
RNF40-201ENST00000324685 G3V4G9 280 aa16.08■□□□□ 0.17
RNF40-201ENST00000324685 PRB2P02812 416 aaPredicted RBP16.08■□□□□ 0.17
RNF40-201ENST00000324685 MDFICQ9P1T7 246 aa16.08■□□□□ 0.17
RNF40-201ENST00000324685 COX7BP24311 80 aa16.08■□□□□ 0.16
RNF40-201ENST00000324685 C4orf48Q5BLP8 95 aa16.08■□□□□ 0.16
RNF40-201ENST00000324685 RNASE8Q8TDE3 154 aaKnown RBP16.08■□□□□ 0.16
RNF40-201ENST00000324685 A0A0J9YX75 114 aa16.08■□□□□ 0.16
RNF40-201ENST00000324685 MIAQ16674 131 aa16.08■□□□□ 0.16
RNF40-201ENST00000324685 ZFP36P26651 326 aaKnown RBP16.07■□□□□ 0.16
RNF40-201ENST00000324685 NDUFA11Q86Y39 141 aa16.07■□□□□ 0.16
RNF40-201ENST00000324685 SPATA25Q9BR10 227 aa16.07■□□□□ 0.16
RNF40-201ENST00000324685 SIRPDQ9H106 197 aa16.07■□□□□ 0.16
RNF40-201ENST00000324685 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
RNF40-201ENST00000324685 KLK12Q9UKR0 248 aa16.06■□□□□ 0.16
RNF40-201ENST00000324685 POLEQ07864 2286 aa16.06■□□□□ 0.16
RNF40-201ENST00000324685 DEFB135Q30KP9 77 aa16.05■□□□□ 0.16
RNF40-201ENST00000324685 PRO0255Q9UI72 69 aa16.05■□□□□ 0.16
RNF40-201ENST00000324685 TANC1Q9C0D5 1861 aa16.05■□□□□ 0.16
RNF40-201ENST00000324685 FANCD2OSQ96PS1 177 aa16.05■□□□□ 0.16
RNF40-201ENST00000324685 LINC00643Q86TS7 51 aa16.04■□□□□ 0.16
RNF40-201ENST00000324685 E7EUB6 86 aa16.04■□□□□ 0.16
RNF40-201ENST00000324685 SPATA12Q7Z6I5 190 aa16.04■□□□□ 0.16
RNF40-201ENST00000324685 C11orf1Q9H5F2 150 aa16.04■□□□□ 0.16
RNF40-201ENST00000324685 KLK5Q9Y337 293 aaPredicted RBP16.04■□□□□ 0.16
RNF40-201ENST00000324685 B9D2Q9BPU9 175 aa16.03■□□□□ 0.16
RNF40-201ENST00000324685 DOCK8Q8NF50 2099 aa16.03■□□□□ 0.16
RNF40-201ENST00000324685 INSL3P51460 131 aa16.03■□□□□ 0.16
RNF40-201ENST00000324685 EML6Q6ZMW3 1958 aa16.03■□□□□ 0.16
RNF40-201ENST00000324685 A6NDX4 124 aa16.03■□□□□ 0.16
RNF40-201ENST00000324685 SEC61GP60059 68 aa16.02■□□□□ 0.15
RNF40-201ENST00000324685 Q6ZUT4 128 aa16.01■□□□□ 0.15
RNF40-201ENST00000324685 A0A1B0GXF2 115 aa16.01■□□□□ 0.15
RNF40-201ENST00000324685 ODF3Q96PU9 254 aa16.01■□□□□ 0.15
RNF40-201ENST00000324685 MAP6D1Q9H9H5 199 aa16.01■□□□□ 0.15
RNF40-201ENST00000324685 SPTBN1Q01082 2364 aaKnown RBP16.01■□□□□ 0.15
RNF40-201ENST00000324685 UNQ9165/PRO28630Q6UXU0 137 aa16.01■□□□□ 0.15
RNF40-201ENST00000324685 H0Y9J4 135 aa16■□□□□ 0.15
RNF40-201ENST00000324685 DEFB1P60022 68 aa16■□□□□ 0.15
RNF40-201ENST00000324685 SMAD5-AS1Q9Y6J3 95 aa16■□□□□ 0.15
RNF40-201ENST00000324685 TCL1BO95988 128 aa15.99■□□□□ 0.15
RNF40-201ENST00000324685 NCKAP5O14513 1909 aa15.99■□□□□ 0.15
RNF40-201ENST00000324685 FRMD6-AS1P0C7T7 363 aa15.99■□□□□ 0.15
RNF40-201ENST00000324685 UFSP1Q6NVU6 142 aa15.99■□□□□ 0.15
RNF40-201ENST00000324685 PLXND1Q9Y4D7 1925 aa15.99■□□□□ 0.15
RNF40-201ENST00000324685 HIST2H2BDQ6DRA6 164 aa15.99■□□□□ 0.15
RNF40-201ENST00000324685 IGKV1D-37A0A075B6S9 117 aa15.98■□□□□ 0.15
RNF40-201ENST00000324685 ZNF407Q9C0G0 2248 aa15.98■□□□□ 0.15
RNF40-201ENST00000324685 DEFB4AO15263 64 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms