RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 C11orf68Q9H3H3 251 aaKnown RBP19.61■□□□□ 0.73
CTDNEP1-201ENST00000318988 DKK2Q9UBU2 259 aa19.61■□□□□ 0.73
CTDNEP1-201ENST00000318988 A0A087WWL8 130 aa19.6■□□□□ 0.73
CTDNEP1-201ENST00000318988 TEX48A0A1B0GUV7 120 aa19.6■□□□□ 0.73
CTDNEP1-201ENST00000318988 DEFB130BP0DP73 79 aa19.6■□□□□ 0.73
CTDNEP1-201ENST00000318988 DEFB130AP0DP74 79 aa19.6■□□□□ 0.73
CTDNEP1-201ENST00000318988 APCSP02743 223 aa19.59■□□□□ 0.73
CTDNEP1-201ENST00000318988 MGPP08493 103 aa19.59■□□□□ 0.73
CTDNEP1-201ENST00000318988 OR4C5Q8NGB2 326 aa19.59■□□□□ 0.73
CTDNEP1-201ENST00000318988 MRPL18Q9H0U6 180 aaKnown RBP19.59■□□□□ 0.73
CTDNEP1-201ENST00000318988 FABP9Q0Z7S8 132 aa19.58■□□□□ 0.73
CTDNEP1-201ENST00000318988 FAM104BQ5XKR9 115 aa19.58■□□□□ 0.73
CTDNEP1-201ENST00000318988 AMN1Q8IY45 258 aa19.58■□□□□ 0.73
CTDNEP1-201ENST00000318988 RS1O15537 224 aa19.57■□□□□ 0.72
CTDNEP1-201ENST00000318988 CFAP126Q5VTH2 177 aa19.57■□□□□ 0.72
CTDNEP1-201ENST00000318988 TRAV4A0A0B4J268 109 aa19.56■□□□□ 0.72
CTDNEP1-201ENST00000318988 RHODO00212 210 aa19.56■□□□□ 0.72
CTDNEP1-201ENST00000318988 NHLRC4P0CG21 123 aaPredicted RBP19.56■□□□□ 0.72
CTDNEP1-201ENST00000318988 DAD1P61803 113 aa19.56■□□□□ 0.72
CTDNEP1-201ENST00000318988 SAMD10Q9BYL1 202 aa19.56■□□□□ 0.72
CTDNEP1-201ENST00000318988 F5H697 171 aa19.56■□□□□ 0.72
CTDNEP1-201ENST00000318988 CRYGDP07320 174 aa19.56■□□□□ 0.72
CTDNEP1-201ENST00000318988 A0A0J9YWU9 116 aa19.55■□□□□ 0.72
CTDNEP1-201ENST00000318988 LINC00612Q8N6U2 182 aa19.55■□□□□ 0.72
CTDNEP1-201ENST00000318988 RAB4AP20338 218 aa19.54■□□□□ 0.72
CTDNEP1-201ENST00000318988 SLAQ13239 276 aa19.54■□□□□ 0.72
CTDNEP1-201ENST00000318988 ZNF56Q15929 161 aa19.54■□□□□ 0.72
CTDNEP1-201ENST00000318988 CELA1Q9UNI1 258 aa19.54■□□□□ 0.72
CTDNEP1-201ENST00000318988 KIF25-AS1Q9Y6Z4 181 aa19.54■□□□□ 0.72
CTDNEP1-201ENST00000318988 IGHV3-53P01767 116 aa19.53■□□□□ 0.72
CTDNEP1-201ENST00000318988 TRGC2P03986 189 aa19.53■□□□□ 0.72
CTDNEP1-201ENST00000318988 IGHV3-73A0A0B4J1V6 119 aa19.52■□□□□ 0.72
CTDNEP1-201ENST00000318988 CIDEAO60543 219 aa19.52■□□□□ 0.72
CTDNEP1-201ENST00000318988 ZFP2Q6ZN57 461 aa19.52■□□□□ 0.72
CTDNEP1-201ENST00000318988 MRPL51Q4U2R6 128 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-201ENST00000318988 POM121L12Q8N7R1 296 aa19.51■□□□□ 0.71
CTDNEP1-201ENST00000318988 RNF185Q96GF1 192 aa19.51■□□□□ 0.71
CTDNEP1-201ENST00000318988 C18orf15Q96N68 181 aa19.51■□□□□ 0.71
CTDNEP1-201ENST00000318988 KIAA1644Q3SXP7 199 aa19.51■□□□□ 0.71
CTDNEP1-201ENST00000318988 ZNF479Q96JC4 524 aa19.51■□□□□ 0.71
CTDNEP1-201ENST00000318988 CKS2P33552 79 aa19.5■□□□□ 0.71
CTDNEP1-201ENST00000318988 MRAP2Q96G30 205 aa19.5■□□□□ 0.71
CTDNEP1-201ENST00000318988 LINC00315P59091 139 aa19.49■□□□□ 0.71
CTDNEP1-201ENST00000318988 UFSP1Q6NVU6 142 aa19.48■□□□□ 0.71
CTDNEP1-201ENST00000318988 TRGV4A0A0C4DH28 118 aa19.47■□□□□ 0.71
CTDNEP1-201ENST00000318988 PPBPP02775 128 aa19.47■□□□□ 0.71
CTDNEP1-201ENST00000318988 ORMDL3Q8N138 153 aa19.47■□□□□ 0.71
CTDNEP1-201ENST00000318988 C1orf196B1AJZ1 125 aa19.46■□□□□ 0.71
CTDNEP1-201ENST00000318988 D6R8Y8 96 aa19.46■□□□□ 0.71
CTDNEP1-201ENST00000318988 C11orf45Q8TAV5 145 aa19.46■□□□□ 0.71
CTDNEP1-201ENST00000318988 TRAV26-2A0A0B4J265 109 aa19.46■□□□□ 0.71
CTDNEP1-201ENST00000318988 SUMO4Q6EEV6 95 aa19.46■□□□□ 0.71
CTDNEP1-201ENST00000318988 MEGF8Q7Z7M0 2845 aa19.45■□□□□ 0.7
CTDNEP1-201ENST00000318988 H7C1H1 209 aa19.45■□□□□ 0.7
CTDNEP1-201ENST00000318988 ATP5G1P05496 136 aa19.45■□□□□ 0.7
CTDNEP1-201ENST00000318988 SMKR1H3BMG3 65 aa19.44■□□□□ 0.7
CTDNEP1-201ENST00000318988 NCR2O95944 276 aa19.44■□□□□ 0.7
CTDNEP1-201ENST00000318988 C12orf74Q32Q52 190 aa19.43■□□□□ 0.7
CTDNEP1-201ENST00000318988 PRELID3AQ96N28 172 aa19.43■□□□□ 0.7
CTDNEP1-201ENST00000318988 SRIP30626 198 aa19.42■□□□□ 0.7
CTDNEP1-201ENST00000318988 PPP1R17O96001 155 aa19.41■□□□□ 0.7
CTDNEP1-201ENST00000318988 U3KQK5 164 aa19.41■□□□□ 0.7
CTDNEP1-201ENST00000318988 HTN3P15516 51 aa19.41■□□□□ 0.7
CTDNEP1-201ENST00000318988 FHL2Q14192 279 aa19.41■□□□□ 0.7
CTDNEP1-201ENST00000318988 ALKBH7Q9BT30 221 aaPredicted RBP19.41■□□□□ 0.7
CTDNEP1-201ENST00000318988 Q6ZSN1 163 aa19.4■□□□□ 0.7
CTDNEP1-201ENST00000318988 LAMTOR2Q9Y2Q5 125 aa19.4■□□□□ 0.7
CTDNEP1-201ENST00000318988 M0QY20 66 aa19.39■□□□□ 0.69
CTDNEP1-201ENST00000318988 PHOX2AO14813 284 aa19.39■□□□□ 0.69
CTDNEP1-201ENST00000318988 GATA1P15976 413 aaPredicted RBP19.39■□□□□ 0.69
CTDNEP1-201ENST00000318988 NANOS2P60321 138 aaKnown RBP19.39■□□□□ 0.69
CTDNEP1-201ENST00000318988 RAB5BP61020 215 aa19.39■□□□□ 0.69
CTDNEP1-201ENST00000318988 F5H768 121 aa19.38■□□□□ 0.69
CTDNEP1-201ENST00000318988 OR10J3Q5JRS4 329 aa19.38■□□□□ 0.69
CTDNEP1-201ENST00000318988 HHLA3Q9XRX5 114 aa19.38■□□□□ 0.69
CTDNEP1-201ENST00000318988 K7EQD1 137 aa19.37■□□□□ 0.69
CTDNEP1-201ENST00000318988 EDA2RQ9HAV5 297 aa19.37■□□□□ 0.69
CTDNEP1-201ENST00000318988 TENM3Q9P273 2699 aa19.37■□□□□ 0.69
CTDNEP1-201ENST00000318988 TRBV6-4A0A1B0GX49 114 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 GAS8-AS1O95177 125 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 TNFRSF6BO95407 300 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 Q6ZTC4 211 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 SLC25A29Q8N8R3 303 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 PRADC1Q9BSG0 188 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 NIT2Q9NQR4 276 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 HUWE1Q7Z6Z7 4374 aaKnown RBP19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 NACAE9PAV3 2078 aa19.36■□□□□ 0.69
CTDNEP1-201ENST00000318988 HOXA5P20719 270 aa19.35■□□□□ 0.69
CTDNEP1-201ENST00000318988 RPL39LQ96EH5 51 aaKnown RBP19.35■□□□□ 0.69
CTDNEP1-201ENST00000318988 PRO0255Q9UI72 69 aa19.35■□□□□ 0.69
CTDNEP1-201ENST00000318988 NPYP01303 97 aa19.35■□□□□ 0.69
CTDNEP1-201ENST00000318988 RHOHQ15669 191 aa19.35■□□□□ 0.69
CTDNEP1-201ENST00000318988 NRACQ8N912 160 aa19.35■□□□□ 0.69
CTDNEP1-201ENST00000318988 DNAH9Q9NYC9 4486 aa19.34■□□□□ 0.69
CTDNEP1-201ENST00000318988 MAP1LC3AQ9H492 121 aa19.34■□□□□ 0.69
CTDNEP1-201ENST00000318988 ST20Q9HBF5 79 aa19.34■□□□□ 0.69
CTDNEP1-201ENST00000318988 TNFRSF18Q9Y5U5 241 aa19.34■□□□□ 0.69
CTDNEP1-201ENST00000318988 TRBV10-1A0A0K0K1A3 114 aa19.33■□□□□ 0.68
CTDNEP1-201ENST00000318988 P0DMU3 169 aa19.33■□□□□ 0.68
CTDNEP1-201ENST00000318988 FAM231AP0DMU4 169 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms