RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 RPH3ALQ9UNE2 315 aa5.67□□□□□ -1.5
CNOT4-201ENST00000315544 PLECQ15149 4684 aaKnown RBP5.66□□□□□ -1.5
CNOT4-201ENST00000315544 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 IGHV4-38-2P0DP08 117 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 C22orf15Q8WYQ4 148 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
CNOT4-201ENST00000315544 C19orf73Q9NVV2 129 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 TENM1Q9UKZ4 2725 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 MEGF8Q7Z7M0 2845 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 MED13LQ71F56 2210 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 IGHV1-69DA0A0B4J2H0 117 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 OVOL1O14753 267 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 TOX4O94842 621 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 IGHV1-69P01742 117 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 ANKHD1Q8IWZ3 2542 aaKnown RBP5.66□□□□□ -1.5
CNOT4-201ENST00000315544 DOPEY2Q9Y3R5 2298 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 B4DSR2 109 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 K7EQG2 157 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 KRTAP10-3P60369 221 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 SMR3AQ99954 134 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 CITED1Q99966 193 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
CNOT4-201ENST00000315544 IGHV3-23P01764 117 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 Q6ZSN1 163 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 RPEQ96AT9 228 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 ZNF702PQ9H963 129 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 PKHD1P08F94 4074 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 TMEM263Q8WUH6 116 aaKnown RBP5.65□□□□□ -1.5
CNOT4-201ENST00000315544 TIMM17AQ99595 171 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 HILPDAQ9Y5L2 63 aa5.65□□□□□ -1.5
CNOT4-201ENST00000315544 TEX29Q8N6K0 151 aa5.65□□□□□ -1.51
CNOT4-201ENST00000315544 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 NHLRC4P0CG21 123 aaPredicted RBP5.64□□□□□ -1.51
CNOT4-201ENST00000315544 RAB9AP51151 201 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 INSL3P51460 131 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 MRPS36P82909 103 aaKnown RBP5.64□□□□□ -1.51
CNOT4-201ENST00000315544 SLC25A29Q8N8R3 303 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 BORCS7Q96B45 105 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 PYGO1Q9Y3Y4 419 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 C11orf86A6NJI1 115 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 F8VRH5 84 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 ENSAO43768 121 aaKnown RBP5.64□□□□□ -1.51
CNOT4-201ENST00000315544 C10orf126Q8N4M7 172 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 KMT2AQ03164 3969 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 CFC1BP0CG36 223 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 CFC1P0CG37 223 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 C10orf99Q6UWK7 81 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 HINT2Q9BX68 163 aa5.64□□□□□ -1.51
CNOT4-201ENST00000315544 KRTAP24-1Q3LI83 254 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 ATP6V0E2Q8NHE4 81 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 A0A0G2JLM5 398 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 M0R2P5 195 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 COX7A1P24310 79 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 ATP5J2P56134 94 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 CSNK1G2-AS1Q8NCQ2 148 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 WFDC12Q8WWY7 111 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 SERTAD4Q9NUC0 356 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 TRAV2A0A0B4J234 112 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 F5H768 121 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 K7ERJ3 54 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 BMI1P35226 326 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 C12orf74Q32Q52 190 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 LINC00477Q96M19 166 aa5.63□□□□□ -1.51
CNOT4-201ENST00000315544 PEF1Q9UBV8 284 aaKnown RBP5.63□□□□□ -1.51
CNOT4-201ENST00000315544 TSPAN13O95857 204 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 LAGE3Q14657 143 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 IGLV5-39A0A0G2JS06 123 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 IGKCP01834 107 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 LEPP41159 167 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 CLEC2AQ6UVW9 174 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 C14orf178Q8N769 122 aaPredicted RBP5.62□□□□□ -1.51
CNOT4-201ENST00000315544 MDFICQ9P1T7 246 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.62□□□□□ -1.512e-7■■□□□ 11.4
CNOT4-201ENST00000315544 TRAV40A0A0B4J280 105 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 CRYBA4P53673 196 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 OBSCN-AS1Q96MR7 158 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 JPT2Q9H910 190 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 MOB4Q9Y3A3 225 aa5.62□□□□□ -1.51
CNOT4-201ENST00000315544 GNRH2O43555 120 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 ANXA2RQ3ZCQ2 193 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 MDFIQ99750 246 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 PCNX1Q96RV3 2341 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 ATP5LO75964 103 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 SUMO2P61956 95 aaKnown RBP5.61□□□□□ -1.51
CNOT4-201ENST00000315544 BLCAPP62952 87 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 C4orf48Q5BLP8 95 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 ERASQ7Z444 233 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 LINC00612Q8N6U2 182 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 LRRK2Q5S007 2527 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 LOC107984156A0A0G2JMH3 177 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 PLNP26678 52 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 ARL17AQ8IVW1 177 aa5.61□□□□□ -1.51
CNOT4-201ENST00000315544 MYMXA0A1B0GTQ4 84 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 SCGB1A1P11684 91 aa5.6□□□□□ -1.51
CNOT4-201ENST00000315544 ZNF22P17026 224 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms