RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SMAD5-AS1Q9Y6J3 95 aa10.37□□□□□ -0.75
DDX54-202ENST00000314045 IGLV1-40P01703 118 aa10.36□□□□□ -0.75
DDX54-202ENST00000314045 KLF5Q13887 457 aaPredicted RBP10.36□□□□□ -0.75
DDX54-202ENST00000314045 DEFB114Q30KQ6 69 aa10.36□□□□□ -0.75
DDX54-202ENST00000314045 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
DDX54-202ENST00000314045 PIFOQ8TCI5 191 aa10.36□□□□□ -0.75
DDX54-202ENST00000314045 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
DDX54-202ENST00000314045 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 CTRLP40313 264 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 MAP6D1Q9H9H5 199 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 RNASE1P07998 156 aaKnown RBP10.35□□□□□ -0.75
DDX54-202ENST00000314045 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 HLA-DRB4P13762 266 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 PMVKQ15126 192 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 SMR3AQ99954 134 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 HLA-DRB4X5D2U9 266 aa10.35□□□□□ -0.75
DDX54-202ENST00000314045 RPL39LQ96EH5 51 aaKnown RBP10.34□□□□□ -0.75
DDX54-202ENST00000314045 TMEM141Q96I45 108 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 INSL3P51460 131 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 HILS1P60008 231 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 NDUFA11Q86Y39 141 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 NUPR1O60356 82 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
DDX54-202ENST00000314045 HSD52Q0P140 79 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 C20orf173Q96LM9 149 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 RASL10AQ92737 203 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 MDFICQ9P1T7 246 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 PAX4O43316 350 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
DDX54-202ENST00000314045 F8P00451 2351 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 ZNF747Q9BV97 191 aa10.33□□□□□ -0.76
DDX54-202ENST00000314045 GAGE6Q13070 117 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 A0A096LPF7 62 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 RHOHQ15669 191 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 LGALS9BQ3B8N2 356 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 LGALS9CQ6DKI2 356 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 MRAPQ8TCY5 172 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 TIMM21Q9BVV7 248 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 SNHG12Q9BXW3 62 aa10.32□□□□□ -0.76
DDX54-202ENST00000314045 H3BMM0 161 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 UBE2DNLQ8IWF7 75 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 C16orf74Q96GX8 76 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 CKS1BP61024 79 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 C6orf226Q5I0X4 101 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 C18orf65Q6ZTR6 163 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 C20orf144Q9BQM9 153 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 MED14OSP0DP75 135 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 LINC00158P58513 81 aa10.31□□□□□ -0.76
DDX54-202ENST00000314045 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 F8VRH5 84 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 H3BUT2 72 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 SS18Q15532 418 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 MPV17L2Q567V2 206 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 C11orf68Q9H3H3 251 aaKnown RBP10.3□□□□□ -0.76
DDX54-202ENST00000314045 DEFB125Q8N687 156 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 TMEM238C9JI98 176 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 MRPS16Q9Y3D3 137 aaKnown RBP10.3□□□□□ -0.76
DDX54-202ENST00000314045 A0A0J9YY99 117 aa10.3□□□□□ -0.76
DDX54-202ENST00000314045 DEFB135Q30KP9 77 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 JPT2Q9H910 190 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 K7EMI3 77 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 DLEU1O43261 78 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 IGLL1P15814 213 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 CRIP1P50238 77 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 CRLF1O75462 422 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 PRIMA1Q86XR5 153 aa10.29□□□□□ -0.76
DDX54-202ENST00000314045 A0A1B0GXF2 115 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 NPSP0C0P6 89 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 ESDP10768 282 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 CRIP2P52943 208 aaPredicted RBP10.28□□□□□ -0.76
DDX54-202ENST00000314045 KIR3DS1Q14943 382 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 K7ERU9 68 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 MRGPRG-AS1Q2M3A8 158 aa10.28□□□□□ -0.76
DDX54-202ENST00000314045 IGLC6P0CF74 106 aa10.27□□□□□ -0.76
DDX54-202ENST00000314045 IGLC3P0DOY3 106 aa10.27□□□□□ -0.76
DDX54-202ENST00000314045 RNASE13Q5GAN3 156 aaKnown RBP10.27□□□□□ -0.76
DDX54-202ENST00000314045 ODF3Q96PU9 254 aa10.27□□□□□ -0.76
DDX54-202ENST00000314045 SPCS1Q9Y6A9 102 aa10.27□□□□□ -0.76
DDX54-202ENST00000314045 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.77
DDX54-202ENST00000314045 DNAL4O96015 105 aa10.27□□□□□ -0.77
DDX54-202ENST00000314045 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
DDX54-202ENST00000314045 MYMXA0A1B0GTQ4 84 aa10.27□□□□□ -0.77
DDX54-202ENST00000314045 F8W735 103 aaPredicted RBP10.27□□□□□ -0.77
DDX54-202ENST00000314045 LINC00173Q6ZV60 143 aa10.27□□□□□ -0.77
DDX54-202ENST00000314045 CFAP54Q96N23 3096 aa10.27□□□□□ -0.77
DDX54-202ENST00000314045 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
DDX54-202ENST00000314045 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
DDX54-202ENST00000314045 CIDEAO60543 219 aa10.26□□□□□ -0.77
DDX54-202ENST00000314045 NPC2P61916 151 aa10.26□□□□□ -0.77
DDX54-202ENST00000314045 DSCAML1Q8TD84 2053 aa10.26□□□□□ -0.77
DDX54-202ENST00000314045 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms