RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GAGE5Q13069 117 aa17.89■□□□□ 0.45
CDKN2A-201ENST00000304494 GAGE13Q4V321 117 aa17.89■□□□□ 0.45
CDKN2A-201ENST00000304494 FAM74A4Q5TZK3 123 aa17.89■□□□□ 0.45
CDKN2A-201ENST00000304494 AKAP14Q86UN6 197 aa17.89■□□□□ 0.45
CDKN2A-201ENST00000304494 IFNA1P01562 189 aa17.87■□□□□ 0.45
CDKN2A-201ENST00000304494 LINC00694P0DN24 101 aa17.87■□□□□ 0.45
CDKN2A-201ENST00000304494 PRR27Q6MZM9 219 aa17.87■□□□□ 0.45
CDKN2A-201ENST00000304494 C14orf178Q8N769 122 aaPredicted RBP17.87■□□□□ 0.45
CDKN2A-201ENST00000304494 LRP1BQ9NZR2 4599 aa17.87■□□□□ 0.45
CDKN2A-201ENST00000304494 A0A087WWL8 130 aa17.86■□□□□ 0.45
CDKN2A-201ENST00000304494 KRTAP10-2P60368 255 aa17.86■□□□□ 0.45
CDKN2A-201ENST00000304494 RPL19P84098 196 aaKnown RBP17.86■□□□□ 0.45
CDKN2A-201ENST00000304494 PDE6DO43924 150 aa17.85■□□□□ 0.45
CDKN2A-201ENST00000304494 CDK2AP2O75956 126 aa17.85■□□□□ 0.45
CDKN2A-201ENST00000304494 MEF2BQ02080 365 aaPredicted RBP17.85■□□□□ 0.45
CDKN2A-201ENST00000304494 DERL1Q9BUN8 251 aa17.85■□□□□ 0.45
CDKN2A-201ENST00000304494 A0A087WWC5 75 aa17.83■□□□□ 0.44
CDKN2A-201ENST00000304494 CENPWQ5EE01 88 aa17.83■□□□□ 0.44
CDKN2A-201ENST00000304494 PGPEP1Q9NXJ5 209 aa17.83■□□□□ 0.44
CDKN2A-201ENST00000304494 PCLOQ9Y6V0 5065 aa17.82■□□□□ 0.44
CDKN2A-201ENST00000304494 hCG_2014768A0A024R1R8 64 aa17.82■□□□□ 0.44
CDKN2A-201ENST00000304494 IBA57-AS1B1ANH7 110 aa17.82■□□□□ 0.44
CDKN2A-201ENST00000304494 SMIM12Q96EX1 92 aa17.82■□□□□ 0.44
CDKN2A-201ENST00000304494 Q9UF83 564 aa17.82■□□□□ 0.44
CDKN2A-201ENST00000304494 SNAI2O43623 268 aa17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 IGHV3-30P01768 117 aa17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 IGHV3-33P01772 117 aa17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 OR5AL1P0C617 328 aa17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 IGHV3-30-3P0DP02 117 aa17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 IGHV3-30-5P0DP03 117 aa17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 OR10AG1Q8NH19 301 aa17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 SSBP4Q9BWG4 385 aaPredicted RBP17.81■□□□□ 0.44
CDKN2A-201ENST00000304494 A0A087WTM6 91 aa17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 TRBV10-1A0A0K0K1A3 114 aa17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 BCL2P10415 239 aa17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 TAGLN2P37802 199 aaKnown RBP17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 GNG4P50150 75 aa17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 C9orf62Q8N4C0 152 aa17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 VAX2Q9UIW0 290 aa17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 DNAH5Q8TE73 4624 aa17.8■□□□□ 0.44
CDKN2A-201ENST00000304494 SPANXN1Q5VSR9 72 aa17.79■□□□□ 0.44
CDKN2A-201ENST00000304494 CDPF1Q6NVV7 123 aa17.79■□□□□ 0.44
CDKN2A-201ENST00000304494 DAZAP1Q96EP5 407 aaKnown RBP17.79■□□□□ 0.44
CDKN2A-201ENST00000304494 PSCAO43653 123 aa17.78■□□□□ 0.44
CDKN2A-201ENST00000304494 RAB4BP61018 213 aa17.78■□□□□ 0.44
CDKN2A-201ENST00000304494 LAGE3Q14657 143 aa17.78■□□□□ 0.44
CDKN2A-201ENST00000304494 MED9Q9NWA0 146 aa17.78■□□□□ 0.44
CDKN2A-201ENST00000304494 RPL36AP83881 106 aaKnown RBP17.77■□□□□ 0.44
CDKN2A-201ENST00000304494 RPL36ALQ969Q0 106 aaKnown RBP17.77■□□□□ 0.44
CDKN2A-201ENST00000304494 HSPG2P98160 4391 aa17.77■□□□□ 0.43
CDKN2A-201ENST00000304494 RAB19A4D1S5 217 aa17.76■□□□□ 0.43
CDKN2A-201ENST00000304494 IGLV2-8P01709 118 aa17.76■□□□□ 0.43
CDKN2A-201ENST00000304494 RPS20P60866 119 aaKnown RBP17.76■□□□□ 0.43
CDKN2A-201ENST00000304494 ZNF56Q15929 161 aa17.75■□□□□ 0.43
CDKN2A-201ENST00000304494 Q9HAA7 133 aa17.75■□□□□ 0.43
CDKN2A-201ENST00000304494 BIN3Q9NQY0 253 aa17.75■□□□□ 0.43
CDKN2A-201ENST00000304494 TRBV7-3A0A075B6L6 115 aa17.74■□□□□ 0.43
CDKN2A-201ENST00000304494 MUC21A0A0G2JKD1 596 aa17.73■□□□□ 0.43
CDKN2A-201ENST00000304494 MUC21A0A140T8X8 626 aa17.73■□□□□ 0.43
CDKN2A-201ENST00000304494 C19orf71A6NCJ1 209 aa17.73■□□□□ 0.43
CDKN2A-201ENST00000304494 OR2D3Q8NGH3 330 aa17.73■□□□□ 0.43
CDKN2A-201ENST00000304494 URGCP-MRPS24S4R325 110 aa17.73■□□□□ 0.43
CDKN2A-201ENST00000304494 XKRY2A2RUG3 117 aa17.72■□□□□ 0.43
CDKN2A-201ENST00000304494 UBE2D3P61077 147 aa17.72■□□□□ 0.43
CDKN2A-201ENST00000304494 UBE2D2P62837 147 aa17.72■□□□□ 0.43
CDKN2A-201ENST00000304494 TOR2AQ5JU69 321 aa17.72■□□□□ 0.43
CDKN2A-201ENST00000304494 OR10G8Q8NGN5 311 aa17.72■□□□□ 0.43
CDKN2A-201ENST00000304494 AP1S3Q96PC3 154 aa17.72■□□□□ 0.43
CDKN2A-201ENST00000304494 APOBP04114 4563 aaKnown RBP17.72■□□□□ 0.43
CDKN2A-201ENST00000304494 TRBV20OR9-2A0A075B6H5 130 aa17.71■□□□□ 0.43
CDKN2A-201ENST00000304494 P01737 135 aa17.71■□□□□ 0.43
CDKN2A-201ENST00000304494 SMIM17P0DL12 118 aa17.71■□□□□ 0.43
CDKN2A-201ENST00000304494 FER1L6-AS1Q8NA97 138 aa17.71■□□□□ 0.43
CDKN2A-201ENST00000304494 TPPP3Q9BW30 176 aa17.71■□□□□ 0.43
CDKN2A-201ENST00000304494 SSTP61278 116 aa17.7■□□□□ 0.42
CDKN2A-201ENST00000304494 BLOC1S1P78537 153 aa17.7■□□□□ 0.42
CDKN2A-201ENST00000304494 ALKAL2Q6UX46 152 aa17.7■□□□□ 0.42
CDKN2A-201ENST00000304494 TM2D2Q9BX73 214 aa17.7■□□□□ 0.42
CDKN2A-201ENST00000304494 TRAV8-3A0A0A6YYJ7 113 aa17.69■□□□□ 0.42
CDKN2A-201ENST00000304494 F5H697 171 aa17.69■□□□□ 0.42
CDKN2A-201ENST00000304494 IGLC6P0CF74 106 aa17.69■□□□□ 0.42
CDKN2A-201ENST00000304494 Q8N3U1 123 aa17.69■□□□□ 0.42
CDKN2A-201ENST00000304494 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.69■□□□□ 0.42
CDKN2A-201ENST00000304494 KRTAP17-1Q9BYP8 105 aa17.69■□□□□ 0.42
CDKN2A-201ENST00000304494 LRCOL1A6NCL2 159 aa17.68■□□□□ 0.42
CDKN2A-201ENST00000304494 GZMBP10144 247 aa17.68■□□□□ 0.42
CDKN2A-201ENST00000304494 FUSP35637 526 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDKN2A-201ENST00000304494 DAZ4Q86SG3 579 aaKnown RBP17.68■□□□□ 0.42
CDKN2A-201ENST00000304494 MAPKAPK5-AS1Q8N8E1 139 aa17.68■□□□□ 0.42
CDKN2A-201ENST00000304494 DAZ3Q9NR90 486 aaKnown RBP17.68■□□□□ 0.42
CDKN2A-201ENST00000304494 CACNG7P62955 275 aa17.67■□□□□ 0.42
CDKN2A-201ENST00000304494 NIT1Q86X76 327 aa17.67■□□□□ 0.42
CDKN2A-201ENST00000304494 NEXN-AS1Q8NBZ9 246 aa17.67■□□□□ 0.42
CDKN2A-201ENST00000304494 F2Z2F3 143 aa17.66■□□□□ 0.42
CDKN2A-201ENST00000304494 KCNIP4Q6PIL6 250 aa17.66■□□□□ 0.42
CDKN2A-201ENST00000304494 CHCHD7Q9BUK0 85 aa17.66■□□□□ 0.42
CDKN2A-201ENST00000304494 KIF25-AS1Q9Y6Z4 181 aa17.66■□□□□ 0.42
CDKN2A-201ENST00000304494 RBFOX3A6NFN3 312 aa17.65■□□□□ 0.42
CDKN2A-201ENST00000304494 A0A087WX48 190 aa17.64■□□□□ 0.41
CDKN2A-201ENST00000304494 TRBV6-8A0A0A6YYG3 113 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms