RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SCRT2Q9NQ03 307 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 CCL25O15444 150 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 INSP01308 110 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 GATA1P15976 413 aaPredicted RBP10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 OR2K2Q8NGT1 345 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 MDFICQ9P1T7 246 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 HSPB8Q9UJY1 196 aa10.71□□□□□ -0.69
SHCBP1-201ENST00000303383 IGHV3-16A0A0C4DH30 117 aa10.71□□□□□ -0.7
SHCBP1-201ENST00000303383 F5H697 171 aa10.71□□□□□ -0.7
SHCBP1-201ENST00000303383 MRAP2Q96G30 205 aa10.71□□□□□ -0.7
SHCBP1-201ENST00000303383 IGLV1-51P01701 117 aa10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 RBMY1BA6NDE4 496 aaKnown RBP10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 RBMY1EA6NEQ0 496 aaKnown RBP10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 H0Y8G0 127 aa10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 RBMY1DP0C7P1 496 aaKnown RBP10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
SHCBP1-201ENST00000303383 IGHV3OR16-12A0A075B7B8 117 aa10.69□□□□□ -0.7
SHCBP1-201ENST00000303383 GAS8-AS1O95177 125 aa10.69□□□□□ -0.7
SHCBP1-201ENST00000303383 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
SHCBP1-201ENST00000303383 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
SHCBP1-201ENST00000303383 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
SHCBP1-201ENST00000303383 A0A087WWL8 130 aa10.68□□□□□ -0.7
SHCBP1-201ENST00000303383 A8MTW9 85 aa10.68□□□□□ -0.7
SHCBP1-201ENST00000303383 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
SHCBP1-201ENST00000303383 ZNF876PQ49A33 203 aa10.67□□□□□ -0.7
SHCBP1-201ENST00000303383 C9orf85Q96MD7 179 aa10.67□□□□□ -0.7
SHCBP1-201ENST00000303383 LINC00482Q8N8I6 264 aa10.67□□□□□ -0.7
SHCBP1-201ENST00000303383 MUC4Q99102 2169 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 PPP1R17O96001 155 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 HBDP02042 147 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 ZNF415Q09FC8 603 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 JPT2Q9H910 190 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 ZNF56Q15929 161 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 NXPH4O95158 308 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 CITED1Q99966 193 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 SPXQ9BT56 116 aa10.66□□□□□ -0.7
SHCBP1-201ENST00000303383 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.7
SHCBP1-201ENST00000303383 Q8N8P6 123 aa10.65□□□□□ -0.7
SHCBP1-201ENST00000303383 PAM16Q9Y3D7 125 aa10.65□□□□□ -0.7
SHCBP1-201ENST00000303383 LINC00173Q6ZV60 143 aa10.65□□□□□ -0.7
SHCBP1-201ENST00000303383 TRPT1Q86TN4 253 aaKnown RBP10.65□□□□□ -0.7
SHCBP1-201ENST00000303383 A4D1N5 150 aa10.64□□□□□ -0.71
SHCBP1-201ENST00000303383 NRACQ8N912 160 aa10.64□□□□□ -0.71
SHCBP1-201ENST00000303383 SYS1-DBNDD2H3BUS1 97 aa10.64□□□□□ -0.71
SHCBP1-201ENST00000303383 GTSCR1Q86UQ5 136 aa10.64□□□□□ -0.71
SHCBP1-201ENST00000303383 ATOH7Q8N100 152 aa10.64□□□□□ -0.71
SHCBP1-201ENST00000303383 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
SHCBP1-201ENST00000303383 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 ATRQ13535 2644 aa10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 ZNF705AQ6ZN79 300 aaPredicted RBP10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 RPL39LQ96EH5 51 aaKnown RBP10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 PRM2P04554 102 aa10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 CRYBA4P53673 196 aa10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 BEAN1Q3B7T3 259 aa10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 TEX43Q6ZNM6 134 aa10.63□□□□□ -0.71
SHCBP1-201ENST00000303383 BAHCC1Q9P281 2608 aa10.62□□□□□ -0.71
SHCBP1-201ENST00000303383 INSL3P51460 131 aa10.62□□□□□ -0.71
SHCBP1-201ENST00000303383 FAM110AQ9BQ89 295 aa10.62□□□□□ -0.71
SHCBP1-201ENST00000303383 SMIM2Q9BVW6 85 aa10.62□□□□□ -0.71
SHCBP1-201ENST00000303383 LAGE3Q14657 143 aa10.62□□□□□ -0.71
SHCBP1-201ENST00000303383 RASL10AQ92737 203 aa10.62□□□□□ -0.71
SHCBP1-201ENST00000303383 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
SHCBP1-201ENST00000303383 M0R2P5 195 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 ZNF747Q9BV97 191 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 ST20Q9HBF5 79 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 NUDT3O95989 172 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 FCER1GP30273 86 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 RIPPLY3P57055 190 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 SUMO4Q6EEV6 95 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 PET117Q6UWS5 81 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 C18orf15Q96N68 181 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 C1QTNF4Q9BXJ3 329 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 BATFQ16520 125 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 TMEM158Q8WZ71 300 aa10.61□□□□□ -0.71
SHCBP1-201ENST00000303383 KIF25-AS1Q9Y6Z4 181 aa10.6□□□□□ -0.71
SHCBP1-201ENST00000303383 NIPBLQ6KC79 2804 aaeCLIP10.6□□□□□ -0.71
SHCBP1-201ENST00000303383 Q8N976 141 aa10.6□□□□□ -0.71
SHCBP1-201ENST00000303383 IFI27L1Q96BM0 104 aa10.6□□□□□ -0.71
SHCBP1-201ENST00000303383 PGPEP1Q9NXJ5 209 aa10.6□□□□□ -0.71
SHCBP1-201ENST00000303383 TRAV26-1A0A087WT03 109 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 A0A1B0GV72 72 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 SPATA45Q537H7 98 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 OCIAD2Q56VL3 154 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 A0A096LNJ9 63 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 IGHV3-73A0A0B4J1V6 119 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 A8MWV9 139 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 ORMDL2Q53FV1 153 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 DEFB125Q8N687 156 aa10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 MCRIP2Q9BUT9 160 aaKnown RBP10.59□□□□□ -0.71
SHCBP1-201ENST00000303383 H7C1H1 209 aa10.58□□□□□ -0.72
SHCBP1-201ENST00000303383 PRSS1P07477 247 aa10.58□□□□□ -0.72
SHCBP1-201ENST00000303383 HERV-K104P63124 156 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 284.1 ms