RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 CELA1Q9UNI1 258 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 IGHV1OR15-9A0A0B4J2B8 117 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 A0A0J9YX75 114 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 COL8A2P25067 703 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 FAM168AQ92567 244 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 UBE2E1P51965 193 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 WFDC12Q8WWY7 111 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 DIRC1Q969H9 104 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 IGHV1-3A0A0C4DH29 117 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 ZNF833PQ6ZTB9 187 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 VMO1Q7Z5L0 202 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 CCL19Q99731 98 aa3.82□□□□□ -1.8
CSMD3-201ENST00000297405 C2orf70A6NJV1 201 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 ETDCA0A1B0GVM5 59 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 GNLYP22749 145 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 CCL21O00585 134 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 CRYGAP11844 174 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 IGHV3-72A0A0B4J1Y9 119 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 Q8TCH9 128 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 CLPSL1A2RUU4 121 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 PSCAO43653 123 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 GP9P14770 177 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 ATP5J2P56134 94 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 ASPHD1Q5U4P2 390 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 IBA57-AS1B1ANH7 110 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 MPLKIPQ8TAP9 179 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 IGLV3-19P01714 112 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 ODF3Q96PU9 254 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 PRR20EP86478 221 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 PRR20CP86479 221 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 PRR20DP86480 221 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 PRR20BP86481 221 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 PRR20AP86496 221 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 OXLD1Q5BKU9 147 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 TEX22C9J3V5 150 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 LST1O00453 97 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 UBE2D1P51668 147 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 FOXL2NBQ6ZUU3 175 aa3.81□□□□□ -1.8
CSMD3-201ENST00000297405 IGKV3-20P01619 116 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 BSPH1Q075Z2 132 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 WI2-2373I1.2A0A1W2PRP0 233 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 TRIP6Q15654 476 aaKnown RBP3.8□□□□□ -1.8
CSMD3-201ENST00000297405 NSUN5P1Q3KNT7 163 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 RNASE6Q93091 150 aaKnown RBP3.8□□□□□ -1.8
CSMD3-201ENST00000297405 VPREB3Q9UKI3 123 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 CELA2AP08217 269 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 TDRG1Q3Y452 100 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 K7EN84 100 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 PIK3CD-AS1Q5SR53 167 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 Q8N976 141 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 A0A1B0GXF2 115 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 UNC79Q9P2D8 2635 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 SMKR1H3BMG3 65 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 WISP1O95388 367 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 TRBV7-7A0A0K0K1E9 115 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 TMEM178BH3BS89 294 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 LEAP2Q969E1 77 aa3.8□□□□□ -1.8
CSMD3-201ENST00000297405 CCL24O00175 119 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 LINC00694P0DN24 101 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 Q8N9L7 120 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 FAM110DQ8TAY7 271 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-201ENST00000297405 C14orf177Q52M58 125 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 GAFA1Q96PS6 74 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 UFSP1Q6NVU6 142 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 KAAG1Q9UBP8 84 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 UTP20O75691 2785 aaKnown RBP3.79□□□□□ -1.8
CSMD3-201ENST00000297405 IGKV1D-8A0A087WSZ0 117 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 LINC00473A8K010 186 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 GATA1P15976 413 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-201ENST00000297405 RPL28P46779 137 aaKnown RBP3.79□□□□□ -1.8
CSMD3-201ENST00000297405 CDPF1Q6NVV7 123 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 FAM30AQ9NZY2 134 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 hDV103S1A0JD37 113 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 LECT2O14960 151 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 ZNF576Q9H609 170 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 FAM216BQ8N7L0 139 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 NDUFA1O15239 70 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 IGHV3-33P01772 117 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 CD164Q04900 197 aa3.79□□□□□ -1.8
CSMD3-201ENST00000297405 EIF4EBP3O60516 100 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-201ENST00000297405 CLEC2BQ92478 149 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 IGF2BP2-AS1Q96M15 143 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 RHPN1-AS1Q9BWJ2 59 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 PRR31Q5SQ13 230 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 Q8TAT8 98 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 A0A087WWL8 130 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 CCDC179H3BU77 68 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 IGKV4-1P06312 121 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 SDIM1Q6ZPB5 146 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 LOXP28300 417 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-201ENST00000297405 SLURP2P0DP57 97 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 CSRP2Q16527 193 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 ESRGQ1W209 222 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 Q6ZRM9 215 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 FGFBP3Q8TAT2 258 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 LINC00467Q9BRT7 94 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 BPESC1Q9GZL8 116 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 C4orf48Q5BLP8 95 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 U3KQK5 164 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms