RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 NPPCP23582 126 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 ZNF93P35789 620 aaPredicted RBP3.1□□□□□ -1.91
CD44-202ENST00000278385 RPS27P42677 84 aaKnown RBP3.1□□□□□ -1.91
CD44-202ENST00000278385 AKR1C2P52895 323 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 TPPP2P59282 170 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 Q1RN00 199 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
CD44-202ENST00000278385 C14orf177Q52M58 125 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 SPATA12Q7Z6I5 190 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 SAXO1Q8IYX7 474 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 CD177Q8N6Q3 437 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 C14orf178Q8N769 122 aaPredicted RBP3.1□□□□□ -1.91
CD44-202ENST00000278385 OTOSQ8NHW6 89 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 YPEL2Q96QA6 119 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 MIEN1Q9BRT3 115 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 ZNF586Q9NXT0 402 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 TMEM14AQ9Y6G1 99 aa3.1□□□□□ -1.91
CD44-202ENST00000278385 TACC2O95359 2948 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 CHD3Q12873 2000 aaKnown RBP3.09□□□□□ -1.91
CD44-202ENST00000278385 HRNRQ86YZ3 2850 aaPredicted RBP3.09□□□□□ -1.91
CD44-202ENST00000278385 A0A0J9YWU9 116 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 IGHV3-64DA0A0J9YX35 117 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 K7ERS5 55 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 HLA-DQA1P01909 254 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 TCRAP04437 139 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 OR5AC1P0C628 307 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 PTHLHP12272 177 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 RNASE4P34096 147 aaKnown RBP3.09□□□□□ -1.91
CD44-202ENST00000278385 TGFBR1P36897 503 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 AQP4P55087 323 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 TSPEAR-AS2P59090 65 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 S100A10P60903 97 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 TMEM258P61165 79 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 UBA52P62987 128 aaKnown RBP3.09□□□□□ -1.91
CD44-202ENST00000278385 NTM-AS1Q6ZSK4 140 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 LINC00311Q8N616 119 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 ZFAND2AQ8N6M9 145 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.09□□□□□ -1.91
CD44-202ENST00000278385 C3orf56Q8N813 242 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 Q8N976 141 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 DPH3Q96FX2 82 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 CIB3Q96Q77 187 aaPredicted RBP3.09□□□□□ -1.91
CD44-202ENST00000278385 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 DUSP21Q9H596 190 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 XAGE1AQ9HD64 81 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 TAS2R8Q9NYW2 309 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 KAAG1Q9UBP8 84 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 AP4S1Q9Y587 144 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 CELSR1Q9NYQ6 3014 aa3.09□□□□□ -1.91
CD44-202ENST00000278385 CR1P17927 2039 aa3.09□□□□□ -1.92
CD44-202ENST00000278385 PLCE1Q9P212 2302 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 NAV3Q8IVL0 2385 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 DNHD1Q96M86 4753 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 LEPROTO15243 131 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 HIST1H2BKO60814 126 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 GYPAP02724 150 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 HIST1H2BJP06899 126 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 IGHV3-30-3P0DP02 117 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 HLA-DRB4P13762 266 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 RPL27AP46776 148 aaKnown RBP3.08□□□□□ -1.92
CD44-202ENST00000278385 HIST1H4AP62805 103 aaKnown RBP3.08□□□□□ -1.92
CD44-202ENST00000278385 IZUMO2Q6UXV1 221 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 ZNF826PQ6ZT77 177 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 ZNF767PQ75MW2 155 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 RNF182Q8N6D2 247 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 SIGLECL1Q8N7X8 197 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 C5orf17Q8NAS9 161 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 C16orf74Q96GX8 76 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 AMELYQ99218 206 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 VGLL1Q99990 258 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 GABARAPL1Q9H0R8 117 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 Q9H521 79 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 C11orf1Q9H5F2 150 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 C16orf95Q9H693 158 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 C21orf62Q9NYP8 219 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 LINC00588Q9Y4M8 146 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 HLA-DRB4X5D2U9 266 aa3.08□□□□□ -1.92
CD44-202ENST00000278385 FLNAP21333 2647 aaKnown RBP3.08□□□□□ -1.92
CD44-202ENST00000278385 RTTNQ86VV8 2226 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 TRAV40A0A0B4J280 105 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 IGKV3D-20A0A0C4DH25 116 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 ZFP92A6NM28 416 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 H7C423 109 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 K7ERJ3 54 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 UQCRQO14949 82 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 IGLV3-1P01715 115 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 IGKV1-16P04430 117 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 SLC25A5P05141 298 aaKnown RBP3.07□□□□□ -1.92
CD44-202ENST00000278385 GIG44P09565 113 aaPredicted RBP3.07□□□□□ -1.92
CD44-202ENST00000278385 CD28P10747 220 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
CD44-202ENST00000278385 CATR1Q13166 79 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 C12orf73Q69YU5 71 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 ZNF322Q6U7Q0 402 aaPredicted RBP3.07□□□□□ -1.92
CD44-202ENST00000278385 TMEM91Q6ZNR0 172 aa3.07□□□□□ -1.92
CD44-202ENST00000278385 FOXI2Q6ZQN5 318 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms