RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 A0A1B0GXF2 115 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 CD5LO43866 347 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 HOXD3P31249 432 aaPredicted RBP11.01□□□□□ -0.65
TMEM47-201ENST00000275954 CRIP1P50238 77 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 IGHV3-38A0A0C4DH36 116 aa11.01□□□□□ -0.65
TMEM47-201ENST00000275954 CIRBPQ14011 172 aaKnown RBP11.01□□□□□ -0.65
TMEM47-201ENST00000275954 K7EMI3 77 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 IGF1P05019 195 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 IGHV1OR15-1A0A075B7D0 117 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 VWC2LB2RUY7 222 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 TRGV4A0A0C4DH28 118 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 GAGE12BA1L429 117 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 TNFRSF13BO14836 293 aaPredicted RBP11□□□□□ -0.65
TMEM47-201ENST00000275954 CFHR3Q02985 330 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 C11orf71Q6IPW1 123 aa11□□□□□ -0.65
TMEM47-201ENST00000275954 C2orf70A6NJV1 201 aa10.99□□□□□ -0.65
TMEM47-201ENST00000275954 C16orf54Q6UWD8 224 aa10.99□□□□□ -0.65
TMEM47-201ENST00000275954 SLURP1P55000 103 aa10.99□□□□□ -0.65
TMEM47-201ENST00000275954 BVES-AS1Q5T3Y7 98 aa10.99□□□□□ -0.65
TMEM47-201ENST00000275954 AVPP01185 164 aa10.99□□□□□ -0.65
TMEM47-201ENST00000275954 ESDP10768 282 aa10.99□□□□□ -0.65
TMEM47-201ENST00000275954 RNASE13Q5GAN3 156 aaKnown RBP10.99□□□□□ -0.65
TMEM47-201ENST00000275954 MYCNOSP40205 109 aa10.98□□□□□ -0.65
TMEM47-201ENST00000275954 C10orf99Q6UWK7 81 aa10.98□□□□□ -0.65
TMEM47-201ENST00000275954 VPREB3Q9UKI3 123 aa10.98□□□□□ -0.65
TMEM47-201ENST00000275954 K7ERJ3 54 aa10.98□□□□□ -0.65
TMEM47-201ENST00000275954 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
TMEM47-201ENST00000275954 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
TMEM47-201ENST00000275954 ZNF415Q09FC8 603 aa10.97□□□□□ -0.65
TMEM47-201ENST00000275954 JPT2Q9H910 190 aa10.97□□□□□ -0.65
TMEM47-201ENST00000275954 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
TMEM47-201ENST00000275954 LINC01619G3V211 115 aa10.96□□□□□ -0.65
TMEM47-201ENST00000275954 IGHG2P01859 326 aa10.96□□□□□ -0.65
TMEM47-201ENST00000275954 TMEM101Q96IK0 257 aa10.96□□□□□ -0.65
TMEM47-201ENST00000275954 CHCHD5Q9BSY4 110 aa10.96□□□□□ -0.65
TMEM47-201ENST00000275954 LINC01559Q495D7 138 aa10.96□□□□□ -0.65
TMEM47-201ENST00000275954 OR13C6PQ8NH95 151 aa10.96□□□□□ -0.65
TMEM47-201ENST00000275954 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.65
TMEM47-201ENST00000275954 MRPL52Q86TS9 123 aaKnown RBP10.96□□□□□ -0.66
TMEM47-201ENST00000275954 F8VRH5 84 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 LINC00310P59036 64 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 RBAKDNA6NC62 111 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 IGLV2-11P01706 119 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 DEFB130BP0DP73 79 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 DEFB130AP0DP74 79 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 CELSR2Q9HCU4 2923 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 SMAGPQ0VAQ4 97 aa10.95□□□□□ -0.66
TMEM47-201ENST00000275954 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 INSP01308 110 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 ELANEP08246 267 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 Q6ZS46 218 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 A0A087WW49 117 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 H3BRM9 83 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 MRAPQ8TCY5 172 aa10.94□□□□□ -0.66
TMEM47-201ENST00000275954 ADARB2-AS1A8MUL3 147 aa10.93□□□□□ -0.66
TMEM47-201ENST00000275954 RNASE1P07998 156 aaKnown RBP10.93□□□□□ -0.66
TMEM47-201ENST00000275954 RAI1Q7Z5J4 1906 aaPredicted RBP10.93□□□□□ -0.66
TMEM47-201ENST00000275954 CTRLP40313 264 aa10.93□□□□□ -0.66
TMEM47-201ENST00000275954 RPL36AP83881 106 aaKnown RBP10.93□□□□□ -0.66
TMEM47-201ENST00000275954 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
TMEM47-201ENST00000275954 RPL36ALQ969Q0 106 aaKnown RBP10.93□□□□□ -0.66
TMEM47-201ENST00000275954 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
TMEM47-201ENST00000275954 ZNF48Q96MX3 618 aaPredicted RBP10.93□□□□□ -0.66
TMEM47-201ENST00000275954 IGHV4-31P0DP07 118 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 MRPL53Q96EL3 112 aaKnown RBP10.92□□□□□ -0.66
TMEM47-201ENST00000275954 GAGE12JA6NER3 117 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 H3BUA1 57 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 J3QLI3 93 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 GAGE1Q13065 139 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 GAGE4Q13068 117 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 GAGE5Q13069 117 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 EBI3Q14213 229 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 GAGE13Q4V321 117 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 C9orf47Q6ZRZ4 202 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 LENEPQ9Y5L5 61 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 PMVKQ15126 192 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 C11orf68Q9H3H3 251 aaKnown RBP10.92□□□□□ -0.66
TMEM47-201ENST00000275954 ZFAND3Q9H8U3 227 aa10.92□□□□□ -0.66
TMEM47-201ENST00000275954 LY6G6DO95868 133 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 LGALS1P09382 135 aaKnown RBP10.91□□□□□ -0.66
TMEM47-201ENST00000275954 Q6ZQT7 251 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 OR5A1Q8NGJ0 315 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 A6NDX4 124 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
TMEM47-201ENST00000275954 CCL25O15444 150 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 HLA-DRB4P13762 266 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 HLA-DRB4X5D2U9 266 aa10.91□□□□□ -0.66
TMEM47-201ENST00000275954 NIPBLQ6KC79 2804 aaeCLIP10.91□□□□□ -0.66
TMEM47-201ENST00000275954 Q8N1Y9 231 aa10.9□□□□□ -0.66
TMEM47-201ENST00000275954 A0A087WX48 190 aa10.9□□□□□ -0.66
TMEM47-201ENST00000275954 MDFICQ9P1T7 246 aa10.9□□□□□ -0.66
TMEM47-201ENST00000275954 DCHS2Q6V1P9 2916 aa10.9□□□□□ -0.66
TMEM47-201ENST00000275954 FSTL3O95633 263 aa10.9□□□□□ -0.66
TMEM47-201ENST00000275954 CST9LQ9H4G1 147 aa10.9□□□□□ -0.66
TMEM47-201ENST00000275954 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms