RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 M0R2P5 195 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 SCGB1D1O95968 90 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 ZNF705AQ6ZN79 300 aaPredicted RBP10.23□□□□□ -0.77
SS18-201ENST00000269137 ZNF664Q8N3J9 261 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 POM121L12Q8N7R1 296 aa10.23□□□□□ -0.77
SS18-201ENST00000269137 ZMAT5Q9UDW3 170 aaKnown RBP10.23□□□□□ -0.77
SS18-201ENST00000269137 IGHV3OR16-12A0A075B7B8 117 aa10.22□□□□□ -0.77
SS18-201ENST00000269137 KIR2DL5BA0A0G2JN68 375 aa10.22□□□□□ -0.77
SS18-201ENST00000269137 KIR2DL5BA0A0G2JPC4 375 aa10.22□□□□□ -0.77
SS18-201ENST00000269137 AZU1P20160 251 aa10.22□□□□□ -0.77
SS18-201ENST00000269137 KIR2DL5AQ8N109 375 aa10.22□□□□□ -0.77
SS18-201ENST00000269137 KIR2DL5BQ8NHK3 375 aa10.22□□□□□ -0.77
SS18-201ENST00000269137 MRAP2Q96G30 205 aa10.22□□□□□ -0.77
SS18-201ENST00000269137 LINC00315P59091 139 aa10.21□□□□□ -0.77
SS18-201ENST00000269137 RNASE8Q8TDE3 154 aaKnown RBP10.21□□□□□ -0.77
SS18-201ENST00000269137 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.77
SS18-201ENST00000269137 SMKR1H3BMG3 65 aa10.21□□□□□ -0.78
SS18-201ENST00000269137 SMIM17P0DL12 118 aa10.21□□□□□ -0.78
SS18-201ENST00000269137 NIT1Q86X76 327 aa10.21□□□□□ -0.78
SS18-201ENST00000269137 IL17DQ8TAD2 202 aa10.21□□□□□ -0.78
SS18-201ENST00000269137 NDUFAF3Q9BU61 184 aa10.21□□□□□ -0.78
SS18-201ENST00000269137 DNAH3Q8TD57 4116 aa10.2□□□□□ -0.78
SS18-201ENST00000269137 NCR2O95944 276 aa10.2□□□□□ -0.78
SS18-201ENST00000269137 DDTP30046 118 aa10.2□□□□□ -0.78
SS18-201ENST00000269137 AMTP48728 403 aa10.2□□□□□ -0.78
SS18-201ENST00000269137 KRTAP10-11P60412 298 aa10.2□□□□□ -0.78
SS18-201ENST00000269137 JPT2Q9H910 190 aa10.2□□□□□ -0.78
SS18-201ENST00000269137 NPYP01303 97 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 CRYGDP07320 174 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 APOC4P55056 127 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 CHCHD1Q96BP2 118 aaKnown RBP10.19□□□□□ -0.78
SS18-201ENST00000269137 URB1-AS1Q96HZ7 61 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 GAS8-AS1O95177 125 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 TNFRSF6BO95407 300 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 DEFA6Q01524 100 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 NRACQ8N912 160 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 RASL10AQ92737 203 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 C16orf74Q96GX8 76 aa10.19□□□□□ -0.78
SS18-201ENST00000269137 A8MWV9 139 aa10.18□□□□□ -0.78
SS18-201ENST00000269137 LINC00614P0C842 121 aa10.18□□□□□ -0.78
SS18-201ENST00000269137 GATA1P15976 413 aaPredicted RBP10.18□□□□□ -0.78
SS18-201ENST00000269137 PMCHP20382 165 aa10.18□□□□□ -0.78
SS18-201ENST00000269137 MDFIQ99750 246 aa10.18□□□□□ -0.78
SS18-201ENST00000269137 A0A087WWL8 130 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 PRSS47A8MTI9 375 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 MGPP08493 103 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 IGHV4-30-4P0DP06 118 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 DAZ2Q13117 558 aaKnown RBP10.17□□□□□ -0.78
SS18-201ENST00000269137 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 RNASEKQ6P5S7 137 aaKnown RBP10.17□□□□□ -0.78
SS18-201ENST00000269137 MAP1LC3AQ9H492 121 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 PPP1R17O96001 155 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 FAM19A2Q8N3H0 131 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 PRSS3P2Q8NHM4 247 aa10.17□□□□□ -0.78
SS18-201ENST00000269137 PLAC8L1A1L4L8 177 aa10.16□□□□□ -0.78
SS18-201ENST00000269137 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
SS18-201ENST00000269137 A8MZ25 164 aa10.16□□□□□ -0.78
SS18-201ENST00000269137 HSBP1O75506 76 aa10.16□□□□□ -0.78
SS18-201ENST00000269137 IFI27P40305 119 aaPredicted RBP10.16□□□□□ -0.78
SS18-201ENST00000269137 LGALS9BQ3B8N2 356 aa10.16□□□□□ -0.78
SS18-201ENST00000269137 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
SS18-201ENST00000269137 C14orf144Q96I85 54 aa10.16□□□□□ -0.78
SS18-201ENST00000269137 NBEAL2Q6ZNJ1 2754 aa10.15□□□□□ -0.78
SS18-201ENST00000269137 LOC389332A0A1B0GUA5 103 aa10.15□□□□□ -0.78
SS18-201ENST00000269137 KRTDAPP60985 99 aa10.15□□□□□ -0.78
SS18-201ENST00000269137 UFSP1Q6NVU6 142 aa10.15□□□□□ -0.78
SS18-201ENST00000269137 FA2HQ7L5A8 372 aa10.15□□□□□ -0.78
SS18-201ENST00000269137 OVOL2Q9BRP0 275 aa10.15□□□□□ -0.78
SS18-201ENST00000269137 AP5S1Q9NUS5 200 aa10.15□□□□□ -0.78
SS18-201ENST00000269137 MRPL16Q9NX20 251 aaKnown RBP10.15□□□□□ -0.78
SS18-201ENST00000269137 NOTCH1P46531 2555 aa10.15□□□□□ -0.79
SS18-201ENST00000269137 F5H697 171 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 G3V4G9 280 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 RS1O15537 224 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 FAM74A4Q5TZK3 123 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 CFAP126Q5VTH2 177 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 SUMO4Q6EEV6 95 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 Q8N976 141 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 C20orf78Q9BR46 151 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 NXT2Q9NPJ8 142 aaKnown RBP10.14□□□□□ -0.79
SS18-201ENST00000269137 NACAE9PAV3 2078 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 LINC01546A6NGU7 62 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 RHODO00212 210 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 EDA2RQ9HAV5 297 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 X6R8D5 127 aa10.14□□□□□ -0.79
SS18-201ENST00000269137 NBEAL1Q6ZS30 2694 aa10.13□□□□□ -0.79
SS18-201ENST00000269137 TRGV1A0A0A0MS02 117 aa10.13□□□□□ -0.79
SS18-201ENST00000269137 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
SS18-201ENST00000269137 Q8N8P6 123 aa10.13□□□□□ -0.79
SS18-201ENST00000269137 NOP10Q9NPE3 64 aaKnown RBP10.13□□□□□ -0.79
SS18-201ENST00000269137 MGAM2Q2M2H8 2515 aa10.12□□□□□ -0.79
SS18-201ENST00000269137 IGLV2-18A0A075B6J9 118 aa10.12□□□□□ -0.79
SS18-201ENST00000269137 M0QY20 66 aa10.12□□□□□ -0.79
SS18-201ENST00000269137 SUMO2P61956 95 aaKnown RBP10.12□□□□□ -0.79
SS18-201ENST00000269137 ZNF56Q15929 161 aa10.12□□□□□ -0.79
SS18-201ENST00000269137 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
SS18-201ENST00000269137 RPL39LQ96EH5 51 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms