RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
SGCE-201ENST00000265735 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 HLA-DRB4P13762 266 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 CDKN1BP46527 198 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 KIR3DS1Q14943 382 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 PRSS3P2Q8NHM4 247 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 CLUHP3Q96NS8 147 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 LAMTOR2Q9Y2Q5 125 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 HLA-DRB4X5D2U9 266 aa9.18□□□□□ -0.94
SGCE-201ENST00000265735 IGKV3-20P01619 116 aa9.17□□□□□ -0.94
SGCE-201ENST00000265735 KRTDAPP60985 99 aa9.17□□□□□ -0.94
SGCE-201ENST00000265735 FA2HQ7L5A8 372 aa9.17□□□□□ -0.94
SGCE-201ENST00000265735 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
SGCE-201ENST00000265735 PHLDA3Q9Y5J5 127 aa9.17□□□□□ -0.94
SGCE-201ENST00000265735 TIMM8BQ9Y5J9 83 aaPredicted RBP9.17□□□□□ -0.94
SGCE-201ENST00000265735 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 SCRT2Q9NQ03 307 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 IGHV1-24A0A0C4DH33 117 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 GNRH2O43555 120 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 PKIAP61925 76 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 TDRG1Q3Y452 100 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 CSNK1G2-AS1Q8NCQ2 148 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 AP5S1Q9NUS5 200 aa9.16□□□□□ -0.94
SGCE-201ENST00000265735 A8MTW9 85 aa9.15□□□□□ -0.94
SGCE-201ENST00000265735 TSTD3H0UI37 97 aa9.15□□□□□ -0.94
SGCE-201ENST00000265735 EVI2AP22794 236 aa9.15□□□□□ -0.94
SGCE-201ENST00000265735 SPINK13Q1W4C9 94 aa9.15□□□□□ -0.94
SGCE-201ENST00000265735 AMTNQ6UX39 209 aa9.15□□□□□ -0.94
SGCE-201ENST00000265735 DNAH7Q8WXX0 4024 aa9.15□□□□□ -0.94
SGCE-201ENST00000265735 SMKR1H3BMG3 65 aa9.14□□□□□ -0.95
SGCE-201ENST00000265735 M0R381 172 aa9.14□□□□□ -0.95
SGCE-201ENST00000265735 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
SGCE-201ENST00000265735 NPYP01303 97 aa9.14□□□□□ -0.95
SGCE-201ENST00000265735 C3orf79P0CE67 100 aa9.14□□□□□ -0.95
SGCE-201ENST00000265735 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
SGCE-201ENST00000265735 NUTF2P61970 127 aaKnown RBP9.14□□□□□ -0.95
SGCE-201ENST00000265735 CASC10Q5T4H9 136 aa9.14□□□□□ -0.95
SGCE-201ENST00000265735 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
SGCE-201ENST00000265735 TRAV12-2A0A075B6T6 113 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 LOC389332A0A1B0GUA5 103 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 NCR2O95944 276 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
SGCE-201ENST00000265735 IFI27P40305 119 aaPredicted RBP9.13□□□□□ -0.95
SGCE-201ENST00000265735 PMCHL1Q16048 86 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 OR11H2Q8NH07 326 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 MRAP2Q96G30 205 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 C1QTNF4Q9BXJ3 329 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 LOC100996750A0A140TA64 210 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 NXPH4O95158 308 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 KRTAP4-6Q9BYQ5 205 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 DPH3P1Q9H4G8 78 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 HSPB8Q9UJY1 196 aa9.13□□□□□ -0.95
SGCE-201ENST00000265735 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
SGCE-201ENST00000265735 IL17DQ8TAD2 202 aa9.12□□□□□ -0.95
SGCE-201ENST00000265735 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
SGCE-201ENST00000265735 TRGV11A0A075B6L2 103 aa9.11□□□□□ -0.95
SGCE-201ENST00000265735 IGHV3-16A0A0C4DH30 117 aa9.11□□□□□ -0.95
SGCE-201ENST00000265735 ZNF664Q8N3J9 261 aa9.11□□□□□ -0.95
SGCE-201ENST00000265735 TMEM70Q9BUB7 260 aa9.11□□□□□ -0.95
SGCE-201ENST00000265735 C11orf68Q9H3H3 251 aaKnown RBP9.11□□□□□ -0.95
SGCE-201ENST00000265735 XCL2Q9UBD3 114 aa9.11□□□□□ -0.95
SGCE-201ENST00000265735 X6R8D5 127 aa9.11□□□□□ -0.95
SGCE-201ENST00000265735 ZNF705AQ6ZN79 300 aaPredicted RBP9.1□□□□□ -0.95
SGCE-201ENST00000265735 Q8N976 141 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 Q8NAQ8 132 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 SYT8Q8NBV8 401 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 C9orf85Q96MD7 179 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 MAP1LC3CQ9BXW4 147 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 PRO1933Q9H354 126 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 LINC01546A6NGU7 62 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 SMIM17P0DL12 118 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 FXYD7P58549 80 aa9.1□□□□□ -0.95
SGCE-201ENST00000265735 C14orf178Q8N769 122 aaPredicted RBP9.1□□□□□ -0.95
SGCE-201ENST00000265735 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 C20orf202A1L168 122 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 PPP1R17O96001 155 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 HBDP02042 147 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 MIFP14174 115 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 ZFAND6Q6FIF0 208 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 Q8N8P6 123 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 NRACQ8N912 160 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
SGCE-201ENST00000265735 KMT2CQ8NEZ4 4911 aaKnown RBP9.08□□□□□ -0.96
SGCE-201ENST00000265735 CBY3A6NI87 242 aa9.08□□□□□ -0.96
SGCE-201ENST00000265735 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
SGCE-201ENST00000265735 SYS1-DBNDD2H3BUS1 97 aa9.08□□□□□ -0.96
SGCE-201ENST00000265735 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
SGCE-201ENST00000265735 GAS8-AS1O95177 125 aa9.08□□□□□ -0.96
SGCE-201ENST00000265735 MGPP08493 103 aa9.08□□□□□ -0.96
SGCE-201ENST00000265735 RBMY1A1P0DJD3 496 aaKnown RBP9.08□□□□□ -0.96
SGCE-201ENST00000265735 RBMY1CP0DJD4 496 aa9.08□□□□□ -0.96
SGCE-201ENST00000265735 GATA1P15976 413 aaPredicted RBP9.08□□□□□ -0.96
SGCE-201ENST00000265735 RBMY1FQ15415 496 aaKnown RBP9.08□□□□□ -0.96
SGCE-201ENST00000265735 STARD9Q9P2P6 4700 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms