RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 NSD1Q96L73 2696 aaPredicted RBP6.91□□□□□ -1.3
SSR3-201ENST00000265044 COX8CQ7Z4L0 72 aa6.91□□□□□ -1.3
SSR3-201ENST00000265044 RPL39LQ96EH5 51 aaKnown RBP6.91□□□□□ -1.3
SSR3-201ENST00000265044 HNRNPA3P51991 378 aaKnown RBP6.9□□□□□ -1.3
SSR3-201ENST00000265044 ODF3Q96PU9 254 aa6.9□□□□□ -1.3
SSR3-201ENST00000265044 NIPBLQ6KC79 2804 aaeCLIP6.9□□□□□ -1.3
SSR3-201ENST00000265044 G0S2P27469 103 aa6.9□□□□□ -1.3
SSR3-201ENST00000265044 C14orf144Q96I85 54 aa6.9□□□□□ -1.3
SSR3-201ENST00000265044 TRAV2A0A0B4J234 112 aa6.9□□□□□ -1.31
SSR3-201ENST00000265044 TRGV4A0A0C4DH28 118 aa6.9□□□□□ -1.31
SSR3-201ENST00000265044 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.31
SSR3-201ENST00000265044 RNASE3P12724 160 aaKnown RBP6.9□□□□□ -1.31
SSR3-201ENST00000265044 AZU1P20160 251 aa6.9□□□□□ -1.31
SSR3-201ENST00000265044 ORMDL2Q53FV1 153 aa6.9□□□□□ -1.31
SSR3-201ENST00000265044 GAGE12BA1L429 117 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 SDHAF1A6NFY7 115 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 SYS1-DBNDD2H3BUS1 97 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 M0R2P5 195 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 ATP5LO75964 103 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 GAGE7O76087 117 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 GAGE12FP0CL80 117 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 GAGE12GP0CL81 117 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 GAGE12IP0CL82 117 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 NMUP48645 174 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 NOP10Q9NPE3 64 aaKnown RBP6.89□□□□□ -1.31
SSR3-201ENST00000265044 HTN3P15516 51 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 ZMAT5Q9UDW3 170 aaKnown RBP6.89□□□□□ -1.31
SSR3-201ENST00000265044 A8MWV9 139 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 VCYO14598 125 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 SNAI2O43623 268 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
SSR3-201ENST00000265044 SMIM2Q9BVW6 85 aa6.89□□□□□ -1.31
SSR3-201ENST00000265044 IGLL1P15814 213 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 DDTP30046 118 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 INSL3P51460 131 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 Q8N8P6 123 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 CYSLTR1Q9Y271 337 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 IGLV1-51P01701 117 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 FHL3Q13643 280 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 LINC00482Q8N8I6 264 aa6.88□□□□□ -1.31
SSR3-201ENST00000265044 MED14OSP0DP75 135 aa6.87□□□□□ -1.31
SSR3-201ENST00000265044 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
SSR3-201ENST00000265044 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
SSR3-201ENST00000265044 ZNF664Q8N3J9 261 aa6.87□□□□□ -1.31
SSR3-201ENST00000265044 SPXQ9BT56 116 aa6.87□□□□□ -1.31
SSR3-201ENST00000265044 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
SSR3-201ENST00000265044 GATD1Q8NB37 220 aa6.87□□□□□ -1.31
SSR3-201ENST00000265044 RNF185Q96GF1 192 aa6.87□□□□□ -1.31
SSR3-201ENST00000265044 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 hDV102S1A0JD36 115 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 RHODO00212 210 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 ESDP10768 282 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 LINC00310P59036 64 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 AMMECR1LQ6DCA0 310 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 C2orf66Q6UXQ4 117 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 CNFNQ9BYD5 112 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 COTL1Q14019 142 aa6.86□□□□□ -1.31
SSR3-201ENST00000265044 TRAV9-2A0A087WT02 112 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 DEFB135Q30KP9 77 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 TDRG1Q3Y452 100 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 C20orf78Q9BR46 151 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 PDZD2O15018 2839 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 RPL36AP83881 106 aaKnown RBP6.85□□□□□ -1.31
SSR3-201ENST00000265044 DEFB121Q5J5C9 76 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 AMTNQ6UX39 209 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 RPL36ALQ969Q0 106 aaKnown RBP6.85□□□□□ -1.31
SSR3-201ENST00000265044 ZNF747Q9BV97 191 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 UBE2L6O14933 153 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 APOC4P55056 127 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 MORN3Q6PF18 240 aaPredicted RBP6.85□□□□□ -1.31
SSR3-201ENST00000265044 ZNRF2Q8NHG8 242 aa6.85□□□□□ -1.31
SSR3-201ENST00000265044 RBMY1BA6NDE4 496 aaKnown RBP6.84□□□□□ -1.31
SSR3-201ENST00000265044 RBMY1EA6NEQ0 496 aaKnown RBP6.84□□□□□ -1.31
SSR3-201ENST00000265044 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 DEFB4AO15263 64 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 RBMY1DP0C7P1 496 aaKnown RBP6.84□□□□□ -1.31
SSR3-201ENST00000265044 GAGE1Q13065 139 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 GAGE4Q13068 117 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 GAGE5Q13069 117 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 C20orf144Q9BQM9 153 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 TP53TG1Q9Y2A0 90 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 TMEM170BQ5T4T1 132 aa6.84□□□□□ -1.31
SSR3-201ENST00000265044 OXLD1Q5BKU9 147 aa6.84□□□□□ -1.32
SSR3-201ENST00000265044 SLC25A34Q6PIV7 304 aa6.84□□□□□ -1.32
SSR3-201ENST00000265044 RASL10AQ92737 203 aa6.84□□□□□ -1.32
SSR3-201ENST00000265044 TRAV8-6A0A0B4J262 113 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 MAJINQ3KP22 176 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 CRXO43186 299 aaPredicted RBP6.83□□□□□ -1.32
SSR3-201ENST00000265044 P0DMU3 169 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 FAM231AP0DMU4 169 aa6.83□□□□□ -1.32
SSR3-201ENST00000265044 FAM231CP0DMU5 169 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms