RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
CUX2-201ENST00000261726 Q8N1Y9 231 aa11.08□□□□□ -0.64
CUX2-201ENST00000261726 ATOX1O00244 68 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 PLXNB3Q9ULL4 1909 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 SMIM20Q8N5G0 67 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 ZNF524Q96C55 264 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 DIRC1Q969H9 104 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 LENEPQ9Y5L5 61 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 IGHV7-81A0A0B4J1V7 117 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 RNF152Q8N8N0 203 aa11.07□□□□□ -0.64
CUX2-201ENST00000261726 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
CUX2-201ENST00000261726 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
CUX2-201ENST00000261726 CDPF1Q6NVV7 123 aa11.06□□□□□ -0.64
CUX2-201ENST00000261726 RSPO1Q2MKA7 263 aaPredicted RBP11.06□□□□□ -0.64
CUX2-201ENST00000261726 C10orf91Q5T1B1 145 aa11.06□□□□□ -0.64
CUX2-201ENST00000261726 KLK5Q9Y337 293 aaPredicted RBP11.06□□□□□ -0.64
CUX2-201ENST00000261726 GTF3C1Q12789 2109 aa11.05□□□□□ -0.64
CUX2-201ENST00000261726 LGALS9O00182 355 aa11.05□□□□□ -0.64
CUX2-201ENST00000261726 WNK2Q9Y3S1 2297 aa11.05□□□□□ -0.64
CUX2-201ENST00000261726 IGKV2-24A0A0C4DH68 120 aa11.05□□□□□ -0.64
CUX2-201ENST00000261726 CENPFP49454 3210 aa11.05□□□□□ -0.64
CUX2-201ENST00000261726 LINC01545Q5VT33 79 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 NACAE9PAV3 2078 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 C16orf54Q6UWD8 224 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 I3L2K1 104 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 LINC01620Q4KN68 170 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 B9D2Q9BPU9 175 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 TRBV12-3P01733 135 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 EML6Q6ZMW3 1958 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 FGF23Q9GZV9 251 aaPredicted RBP11.04□□□□□ -0.64
CUX2-201ENST00000261726 SPTSSBQ8NFR3 76 aa11.04□□□□□ -0.64
CUX2-201ENST00000261726 IGKV2D-26A0A0A0MRZ7 120 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 DEFB1P60022 68 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 POU2AF1Q16633 256 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 FAM110AQ9BQ89 295 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 H3BQ85 93 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 CASC2Q6XLA1 102 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 BRK1Q8WUW1 75 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 PCNTO95613 3336 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 CRYGBP07316 175 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 DEFB125Q8N687 156 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 TTTY13Q9BZ97 58 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
CUX2-201ENST00000261726 C2orf70A6NJV1 201 aa11.02□□□□□ -0.64
CUX2-201ENST00000261726 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.64
CUX2-201ENST00000261726 CHD3Q12873 2000 aaKnown RBP11.02□□□□□ -0.64
CUX2-201ENST00000261726 K7EIM0 57 aa11.02□□□□□ -0.64
CUX2-201ENST00000261726 GTSF1Q8WW33 167 aa11.02□□□□□ -0.64
CUX2-201ENST00000261726 A0A096LNI7 61 aa11.02□□□□□ -0.65
CUX2-201ENST00000261726 GPHB5Q86YW7 130 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 DNAH12Q6ZR08 3092 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 PKDREJQ9NTG1 2253 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
CUX2-201ENST00000261726 FXYD2P54710 66 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 WFDC2Q14508 124 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 C11orf53Q8IXP5 236 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 PTPRSQ13332 1948 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 IGLV11-55A0A075B6I3 123 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 CTSGP08311 255 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 C5orf56Q8N8D9 126 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 JMJD7-PLA2G4BH0Y9G9 81 aa11.01□□□□□ -0.65
CUX2-201ENST00000261726 ROS1P08922 2347 aa11□□□□□ -0.65
CUX2-201ENST00000261726 PLXND1Q9Y4D7 1925 aa11□□□□□ -0.65
CUX2-201ENST00000261726 TNRC6BQ9UPQ9 1833 aaKnown RBP11□□□□□ -0.65
CUX2-201ENST00000261726 J3KT08 172 aa11□□□□□ -0.65
CUX2-201ENST00000261726 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
CUX2-201ENST00000261726 TOMM6Q96B49 74 aa11□□□□□ -0.65
CUX2-201ENST00000261726 ZNF407Q9C0G0 2248 aa11□□□□□ -0.65
CUX2-201ENST00000261726 PLA2G2CQ5R387 149 aa11□□□□□ -0.65
CUX2-201ENST00000261726 SMAD5-AS1Q9Y6J3 95 aa11□□□□□ -0.65
CUX2-201ENST00000261726 IL15RAQ13261 267 aa10.99□□□□□ -0.65
CUX2-201ENST00000261726 NCKAP5O14513 1909 aa10.99□□□□□ -0.65
CUX2-201ENST00000261726 NUPR1O60356 82 aa10.99□□□□□ -0.65
CUX2-201ENST00000261726 COX7BP24311 80 aa10.99□□□□□ -0.65
CUX2-201ENST00000261726 HIGD2AQ9BW72 106 aa10.99□□□□□ -0.65
CUX2-201ENST00000261726 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
CUX2-201ENST00000261726 TMEM256-PLSCR3K7ERE1 68 aa10.98□□□□□ -0.65
CUX2-201ENST00000261726 CXCL5P42830 114 aa10.98□□□□□ -0.65
CUX2-201ENST00000261726 TEN1Q86WV5 123 aa10.98□□□□□ -0.65
CUX2-201ENST00000261726 ZFP36P26651 326 aaKnown RBP10.98□□□□□ -0.65
CUX2-201ENST00000261726 Q8N9W7 124 aa10.98□□□□□ -0.65
CUX2-201ENST00000261726 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
CUX2-201ENST00000261726 ACACAQ13085 2346 aa10.97□□□□□ -0.65
CUX2-201ENST00000261726 PATE2Q6UY27 113 aa10.97□□□□□ -0.65
CUX2-201ENST00000261726 TRAV23DV6A0A075B6W5 121 aa10.97□□□□□ -0.65
CUX2-201ENST00000261726 MPLKIPQ8TAP9 179 aa10.97□□□□□ -0.65
CUX2-201ENST00000261726 COL4A4P53420 1690 aaPredicted RBP10.97□□□□□ -0.65
CUX2-201ENST00000261726 CEMP1Q6PRD7 247 aaPredicted RBP10.97□□□□□ -0.65
CUX2-201ENST00000261726 C4orf3Q8WVX3 66 aa10.97□□□□□ -0.65
CUX2-201ENST00000261726 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.65
CUX2-201ENST00000261726 NFE4Q86UQ8 179 aa10.96□□□□□ -0.65
CUX2-201ENST00000261726 IGKV1-17P01599 117 aa10.96□□□□□ -0.65
CUX2-201ENST00000261726 NOTCH3Q9UM47 2321 aa10.96□□□□□ -0.65
CUX2-201ENST00000261726 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
CUX2-201ENST00000261726 MDFICQ9P1T7 246 aa10.96□□□□□ -0.65
CUX2-201ENST00000261726 C11orf86A6NJI1 115 aa10.95□□□□□ -0.66
CUX2-201ENST00000261726 IGLV3-1P01715 115 aa10.95□□□□□ -0.66
CUX2-201ENST00000261726 WT1P19544 449 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms