RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SLC25A16P16260 332 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 PHLDA1Q8WV24 401 aaPredicted RBP10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 H3BUX3 64 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 RHPN1-AS1Q9BWJ2 59 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 MYMXA0A1B0GTQ4 84 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 FOXI2Q6ZQN5 318 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 PIFOQ8TCI5 191 aa10.94□□□□□ -0.66
SFSWAP-201ENST00000261674 MUC4Q99102 2169 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 WNK1Q9H4A3 2382 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 LINC01546A6NGU7 62 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 HLA-DRB4P13762 266 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 MRPL16Q9NX20 251 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 HLA-DRB4X5D2U9 266 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 PDZD2O15018 2839 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 TRAV12-3A0A0B4J271 114 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 AVPP01185 164 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 IGHV4-38-2P0DP08 117 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 GPHB5Q86YW7 130 aa10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 TSSC4Q9Y5U2 329 aaPredicted RBP10.93□□□□□ -0.66
SFSWAP-201ENST00000261674 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 ZNF256Q9Y2P7 627 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 U3KQE9 123 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 CD7P09564 240 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 HTN1P15515 57 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 BAALCQ8WXS3 180 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 BAHCC1Q9P281 2608 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 A0A1B0GWB2 263 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 E9PLD3 99 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 HOXA3O43365 443 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 TMEM95Q3KNT9 176 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 GAGE13Q4V321 117 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 TMEM170BQ5T4T1 132 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 FAM159AQ6UWV7 190 aa10.92□□□□□ -0.66
SFSWAP-201ENST00000261674 MRPL53Q96EL3 112 aaKnown RBP10.91□□□□□ -0.66
SFSWAP-201ENST00000261674 OVOL1O14753 267 aa10.91□□□□□ -0.66
SFSWAP-201ENST00000261674 PLEKHB2Q96CS7 222 aa10.91□□□□□ -0.66
SFSWAP-201ENST00000261674 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 LINC01549A6NIU2 74 aa10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 TOMM6Q96B49 74 aa10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 TP53TG1Q9Y2A0 90 aa10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 OTOGQ6ZRI0 2925 aa10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 LGALS1P09382 135 aaKnown RBP10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 INSL3P51460 131 aa10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 DEFB113Q30KQ7 82 aa10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 ZNF418Q8TF45 676 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-201ENST00000261674 IGHV1-69DA0A0B4J2H0 117 aa10.9□□□□□ -0.67
SFSWAP-201ENST00000261674 FAM223BA6NKX1 122 aa10.9□□□□□ -0.67
SFSWAP-201ENST00000261674 IGHV1-69P01742 117 aa10.9□□□□□ -0.67
SFSWAP-201ENST00000261674 ZNF688P0C7X2 276 aa10.9□□□□□ -0.67
SFSWAP-201ENST00000261674 FAM223AQ8IWN6 122 aa10.9□□□□□ -0.67
SFSWAP-201ENST00000261674 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.67
SFSWAP-201ENST00000261674 AZU1P20160 251 aa10.89□□□□□ -0.67
SFSWAP-201ENST00000261674 RRN3P1Q2M238 152 aa10.89□□□□□ -0.67
SFSWAP-201ENST00000261674 SAMD13Q5VXD3 122 aa10.89□□□□□ -0.67
SFSWAP-201ENST00000261674 SMR3AQ99954 134 aa10.89□□□□□ -0.67
SFSWAP-201ENST00000261674 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
SFSWAP-201ENST00000261674 IGHV4-4A0A075B6R2 117 aa10.89□□□□□ -0.67
SFSWAP-201ENST00000261674 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-201ENST00000261674 NIPBLQ6KC79 2804 aaeCLIP10.89□□□□□ -0.671e-6■□□□□ 10
SFSWAP-201ENST00000261674 NDUFA4O00483 81 aa10.88□□□□□ -0.67
SFSWAP-201ENST00000261674 PSMB2P49721 201 aa10.88□□□□□ -0.67
SFSWAP-201ENST00000261674 HIVEP2P31629 2446 aa10.88□□□□□ -0.67
SFSWAP-201ENST00000261674 J3QR89 54 aa10.88□□□□□ -0.67
SFSWAP-201ENST00000261674 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
SFSWAP-201ENST00000261674 C20orf78Q9BR46 151 aa10.88□□□□□ -0.67
SFSWAP-201ENST00000261674 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-201ENST00000261674 TRBV7-3A0A075B6L6 115 aa10.87□□□□□ -0.67
SFSWAP-201ENST00000261674 HIST2H2BDQ6DRA6 164 aa10.87□□□□□ -0.67
SFSWAP-201ENST00000261674 OPRPNQ99935 248 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-201ENST00000261674 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-201ENST00000261674 LENEPQ9Y5L5 61 aa10.87□□□□□ -0.67
SFSWAP-201ENST00000261674 TRAV12-1A0A0B4J245 112 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 F8W1H4 67 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 H7C2G1 150 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 MSMBP08118 114 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 ZNF56Q15929 161 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 KIR2DL4Q99706 377 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 SIGMAR1Q99720 223 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 GAGE12HA6NDE8 117 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 PRSS47A8MTI9 375 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 TAL2Q16559 108 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 KLK9Q9UKQ9 250 aa10.86□□□□□ -0.67
SFSWAP-201ENST00000261674 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
SFSWAP-201ENST00000261674 C10orf99Q6UWK7 81 aa10.85□□□□□ -0.67
SFSWAP-201ENST00000261674 PTH2Q96A98 100 aa10.85□□□□□ -0.67
SFSWAP-201ENST00000261674 DAZ1Q9NQZ3 744 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-201ENST00000261674 SCGB1C2P0DMR2 95 aa10.84□□□□□ -0.67
SFSWAP-201ENST00000261674 SUMO4Q6EEV6 95 aa10.84□□□□□ -0.67
SFSWAP-201ENST00000261674 MORN3Q6PF18 240 aaPredicted RBP10.84□□□□□ -0.67
SFSWAP-201ENST00000261674 MDFICQ9P1T7 246 aa10.84□□□□□ -0.67
SFSWAP-201ENST00000261674 SOCS3O14543 225 aa10.83□□□□□ -0.68
SFSWAP-201ENST00000261674 HERVK_113P61574 105 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms