RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 CR1P17927 2039 aa14.28□□□□□ -0.12
LPCAT3-201ENST00000261407 PLNP26678 52 aa14.28□□□□□ -0.12
LPCAT3-201ENST00000261407 Q6YL49 198 aa14.28□□□□□ -0.12
LPCAT3-201ENST00000261407 EPG5Q9HCE0 2579 aa14.28□□□□□ -0.12
LPCAT3-201ENST00000261407 TRAV12-1A0A0B4J245 112 aa14.27□□□□□ -0.12
LPCAT3-201ENST00000261407 SNRPD3P62318 126 aaKnown RBP14.27□□□□□ -0.12
LPCAT3-201ENST00000261407 CST9LQ9H4G1 147 aa14.27□□□□□ -0.12
LPCAT3-201ENST00000261407 IGHV3-16A0A0C4DH30 117 aa14.27□□□□□ -0.13
LPCAT3-201ENST00000261407 PRSS29PA6NIE9 313 aa14.27□□□□□ -0.13
LPCAT3-201ENST00000261407 LGALS1P09382 135 aaKnown RBP14.27□□□□□ -0.13
LPCAT3-201ENST00000261407 HLA-DRB4P13762 266 aa14.27□□□□□ -0.13
LPCAT3-201ENST00000261407 RPL39P62891 51 aaKnown RBP14.27□□□□□ -0.13
LPCAT3-201ENST00000261407 HLA-DRB4X5D2U9 266 aa14.27□□□□□ -0.13
LPCAT3-201ENST00000261407 APCP25054 2843 aa14.26□□□□□ -0.13
LPCAT3-201ENST00000261407 J3QLI3 93 aa14.26□□□□□ -0.13
LPCAT3-201ENST00000261407 TSHBP01222 138 aa14.26□□□□□ -0.13
LPCAT3-201ENST00000261407 EMP1P54849 157 aa14.26□□□□□ -0.13
LPCAT3-201ENST00000261407 UFSP1Q6NVU6 142 aa14.26□□□□□ -0.13
LPCAT3-201ENST00000261407 DUX3Q96PT4 197 aa14.26□□□□□ -0.13
LPCAT3-201ENST00000261407 NF1P21359 2839 aa14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 CRYGDP07320 174 aa14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 SLURP1P55000 103 aa14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 SONP18583 2426 aaKnown RBP14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 FSHBP01225 129 aa14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 PRM2P04554 102 aa14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 CDKN1BP46527 198 aa14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 POLR2KP53803 58 aaKnown RBP14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 TP53TG1Q9Y2A0 90 aa14.25□□□□□ -0.13
LPCAT3-201ENST00000261407 CEND1Q8N111 149 aa14.24□□□□□ -0.13
LPCAT3-201ENST00000261407 C9orf85Q96MD7 179 aa14.24□□□□□ -0.13
LPCAT3-201ENST00000261407 NHP2Q9NX24 153 aaKnown RBP14.24□□□□□ -0.13
LPCAT3-201ENST00000261407 TMEM89A2RUT3 159 aa14.24□□□□□ -0.13
LPCAT3-201ENST00000261407 SMIM13P0DJ93 91 aa14.24□□□□□ -0.13
LPCAT3-201ENST00000261407 RNF151Q2KHN1 245 aa14.24□□□□□ -0.13
LPCAT3-201ENST00000261407 ZFP2Q6ZN57 461 aa14.24□□□□□ -0.13
LPCAT3-201ENST00000261407 SDHAF1A6NFY7 115 aa14.23□□□□□ -0.13
LPCAT3-201ENST00000261407 MORN3Q6PF18 240 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-201ENST00000261407 UBE2E2Q96LR5 201 aa14.23□□□□□ -0.13
LPCAT3-201ENST00000261407 A0A1W2PPM0 123 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 ELANEP08246 267 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 RBMY1A1P0DJD3 496 aaKnown RBP14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 RBMY1CP0DJD4 496 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 HTN1P15515 57 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 RBMY1FQ15415 496 aaKnown RBP14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 TCTEX1D4Q5JR98 221 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 SAMD13Q5VXD3 122 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 KNCNA6PVL3 124 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 ZNF843Q8N446 348 aa14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 PHLDA1Q8WV24 401 aaPredicted RBP14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 ZNF256Q9Y2P7 627 aaPredicted RBP14.22□□□□□ -0.13
LPCAT3-201ENST00000261407 IGHV1OR15-1A0A075B7D0 117 aa14.21□□□□□ -0.13
LPCAT3-201ENST00000261407 K7EP34 96 aa14.21□□□□□ -0.13
LPCAT3-201ENST00000261407 PPP1R17O96001 155 aa14.21□□□□□ -0.13
LPCAT3-201ENST00000261407 TM2D2Q9BX73 214 aa14.21□□□□□ -0.13
LPCAT3-201ENST00000261407 CHD6Q8TD26 2715 aa14.21□□□□□ -0.14
LPCAT3-201ENST00000261407 LGALS9O00182 355 aa14.21□□□□□ -0.14
LPCAT3-201ENST00000261407 ZNF56Q15929 161 aa14.21□□□□□ -0.14
LPCAT3-201ENST00000261407 OCIAD2Q56VL3 154 aa14.21□□□□□ -0.14
LPCAT3-201ENST00000261407 Q5PR19 223 aa14.21□□□□□ -0.14
LPCAT3-201ENST00000261407 AMTNQ6UX39 209 aa14.21□□□□□ -0.14
LPCAT3-201ENST00000261407 CBY1Q9Y3M2 126 aa14.21□□□□□ -0.14
LPCAT3-201ENST00000261407 IGIPA6NJ69 53 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 SAMD5Q5TGI4 173 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 ODF3Q96PU9 254 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 CYSLTR1Q9Y271 337 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 OR11H12B2RN74 326 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 OR11H1Q8NG94 326 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 OR11H2Q8NH07 326 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 SPCS1Q9Y6A9 102 aa14.2□□□□□ -0.14
LPCAT3-201ENST00000261407 PRRC2AP48634 2157 aaKnown RBP14.19□□□□□ -0.14
LPCAT3-201ENST00000261407 M0QY20 66 aa14.19□□□□□ -0.14
LPCAT3-201ENST00000261407 GTF2H5Q6ZYL4 71 aa14.19□□□□□ -0.14
LPCAT3-201ENST00000261407 PRADC1Q9BSG0 188 aa14.19□□□□□ -0.14
LPCAT3-201ENST00000261407 IGLV4-69A0A075B6H9 119 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 MYMXA0A1B0GTQ4 84 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 VCYO14598 125 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 CD300EQ496F6 205 aaPredicted RBP14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 KLHL30-AS1Q8NEE0 82 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 HIST1H4GQ99525 98 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 OPRPNQ99935 248 aaPredicted RBP14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 C11orf86A6NJI1 115 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 ZNF876PQ49A33 203 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 Q96MF0 132 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 KIR2DL4Q99706 377 aa14.18□□□□□ -0.14
LPCAT3-201ENST00000261407 SAP30O75446 220 aa14.17□□□□□ -0.14
LPCAT3-201ENST00000261407 DEFB131AP59861 70 aa14.17□□□□□ -0.14
LPCAT3-201ENST00000261407 ITPR3Q14573 2671 aa14.17□□□□□ -0.14
LPCAT3-201ENST00000261407 DEFB113Q30KQ7 82 aa14.17□□□□□ -0.14
LPCAT3-201ENST00000261407 FOXI2Q6ZQN5 318 aa14.17□□□□□ -0.14
LPCAT3-201ENST00000261407 NIPBLQ6KC79 2804 aaeCLIP14.17□□□□□ -0.14
LPCAT3-201ENST00000261407 IGHV3-73A0A0B4J1V6 119 aa14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 TRBV27A0A0K0K1C4 114 aa14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 RPL32P62910 135 aaKnown RBP14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 C21orf62-AS1Q17RA5 79 aa14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 PLEKHB2Q96CS7 222 aa14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 E9PLD3 99 aa14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 RNF152Q8N8N0 203 aa14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 CCDC168Q8NDH2 2452 aa14.16□□□□□ -0.14
LPCAT3-201ENST00000261407 TRBV7-3A0A075B6L6 115 aa14.15□□□□□ -0.14
LPCAT3-201ENST00000261407 PROK1P58294 105 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms