RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TRAV25A0A0B4J276 109 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 YPEL3P61236 119 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 SUMO2P61956 95 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM238C9JI98 176 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 PFN1P07737 140 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 GPR183P32249 361 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 MIC13Q5XKP0 118 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 NEGR1Q7Z3B1 354 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 RNF182Q8N6D2 247 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 TMEM141Q96I45 108 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 MS4A6AQ9H2W1 248 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 CHTOPQ9Y3Y2 248 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 NPIPB5A8MRT5 1133 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 DIRC3C9JPN6 131 aa4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 SRSF12Q8WXF0 261 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-201ENST00000260810 TRGV4A0A0C4DH28 118 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 INSL3P51460 131 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 SS18Q15532 418 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 C3orf56Q8N813 242 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 GLMPQ8WWB7 406 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 DPH3Q96FX2 82 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 C7orf77A4D0Y5 90 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 SMIM13P0DJ93 91 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 ARL14EPLP0DKL9 152 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 PSG1P11464 419 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 SCGB1A1P11684 91 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 PLNP26678 52 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 C9orf66Q5T8R8 295 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 ZFAND2AQ8N6M9 145 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 LENEPQ9Y5L5 61 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 OR9G4Q8NGQ1 327 aa4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 C11orf68Q9H3H3 251 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 CARHSP1Q9Y2V2 147 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-201ENST00000260810 C9orf47Q6ZRZ4 202 aa4.09□□□□□ -1.76
TOPBP1-201ENST00000260810 SCGB3A1Q96QR1 104 aa4.09□□□□□ -1.76
TOPBP1-201ENST00000260810 C20orf144Q9BQM9 153 aa4.09□□□□□ -1.76
TOPBP1-201ENST00000260810 MRPL18Q9H0U6 180 aaKnown RBP4.09□□□□□ -1.76
TOPBP1-201ENST00000260810 IGKV3D-20A0A0C4DH25 116 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 A8MWV9 139 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 NDUFA4O00483 81 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 MED14OSP0DP75 135 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 LY6EQ16553 131 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 C1QL4Q86Z23 238 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 LURAP1LQ8IV03 231 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 NPIPB3Q92617 1050 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 HIST1H4GQ99525 98 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 GNB1LQ9BYB4 327 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 DPH3P1Q9H4G8 78 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 DAZ1Q9NQZ3 744 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 IGHV3-35A0A0C4DH35 117 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 ZNF815PA8K554 130 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 VCYO14598 125 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 Q9H3A6 140 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 ZNF492Q9P255 531 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 PRSS29PA6NIE9 313 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 CD28P10747 220 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 ODF3L2Q3SX64 289 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 GFI1BQ5VTD9 330 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 IGLV2-18A0A075B6J9 118 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 F6UB75 175 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 EIF4EBP3O60516 100 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 RNF151Q2KHN1 245 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 TRPT1Q86TN4 253 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 C11orf52Q96A22 123 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 H3BMM0 161 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 H3BTX0 84 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 OR5A1Q8NGJ0 315 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 TMEM14CQ9P0S9 112 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 EPDR1Q9UM22 224 aa4.08□□□□□ -1.76
TOPBP1-201ENST00000260810 H3BUX3 64 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 INAFM2P0DMQ5 153 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 ZNF138P52744 262 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 TDRG1Q3Y452 100 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 TSSC4Q9Y5U2 329 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 A0A1B0GXF2 115 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 RBAKDNA6NC62 111 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 HBDP02042 147 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 CLEC19AQ6UXS0 136 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 GOLT1AQ6ZVE7 132 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 OR10D4PQ8NGN7 298 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 CA1P00915 261 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 C11orf72Q8NBR9 251 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 KLK5Q9Y337 293 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 V9GYV3 84 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 IGHV4OR15-8A0A075B7B6 117 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 A0A087WW49 117 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 SAP30O75446 220 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 DPM2O94777 84 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 CENPWQ5EE01 88 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 MSRB1Q9NZV6 116 aa4.07□□□□□ -1.76
TOPBP1-201ENST00000260810 UBE2CO00762 179 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 CSN3P07498 182 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 CRYBB3P26998 211 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 EXOC3-AS1Q8N2X6 119 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 MYMXA0A1B0GTQ4 84 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 HOXD3P31249 432 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 CKS1BP61024 79 aa4.06□□□□□ -1.76
TOPBP1-201ENST00000260810 ATXN8Q156A1 80 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms